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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918317
Clone id YMU001_000112_B02
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACATGCTAAAGTCAATTGTATCTCGTAACTCCTTTCTTCACTAAGGCTTGTTCTAGAAAA
TCAAAATCAGTGCCATTCTGGCTTTGAGAGGCTTGTGTGCCATGAACCCAAAAAATCATT
CTCAACTCATGTCTTACATTGGCTTTCCACACTTCTTGATGCTGGCATACTCTGCTCCAT
CAACAGCCCTTCCTTTCATGTCAGTATCATTAGCTGCCCTCAAGGGCTTCGGACTCCCTA
CCTTTTCTATACTTGTCTTCATATAACATGGTAAGAAGTTGGTCACCTCCTGCAAGTTCT
CCTTCTCCTCACAATCCACGGCCTGAAGAACAACACTCTTGTCAATCGCAGCAGCCGCAT
TCGCTTGACAAGAAGAAGAAAGAGGATTTCCTGCAATCGAAGGCTCATCTTTACCGCATT
TCTCTGCACTTCGCTGTGTCCTCCTATCAATATGTACACGCACTGGAGGTGGTACAAAAG
GTGGCCTTGCAACCTCACTTAGATGCTTCCATGCAGTTCCTTTGAAGTATGGATGCTTCT
TTATCTCTTCTGCTCCACGAAAAGAGCCAATCTTGCTTCAGC
■■Homology search results ■■ -
sp_hit_id Q54IH8
Definition sp|Q54IH8|NDRB_DICDI Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum
Align length 28
Score (bit) 36.2
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918317|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_B02.
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54IH8|NDRB_DICDI Probable serine/threonine-protein kinase nd...    36   0.12 
sp|Q2LZZ7|ST38L_DROPS Serine/threonine-protein kinase 38-like OS...    35   0.21 
sp|Q9NBK5|ST38L_DROME Serine/threonine-protein kinase 38-like OS...    35   0.21 
sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like OS...    35   0.27 
sp|Q6CFS5|CBK1_YARLI Serine/threonine-protein kinase CBK1 OS=Yar...    35   0.35 
sp|Q6BLJ9|CBK1_DEBHA Serine/threonine-protein kinase CBK1 OS=Deb...    35   0.35 
sp|Q552E9|PKGA_DICDI Probable serine/threonine-protein kinase pk...    34   0.46 
sp|Q7TSE6|ST38L_MOUSE Serine/threonine-protein kinase 38-like OS...    33   0.79 
sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. ...    33   0.79 
sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. ...    33   0.79 
sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=P...    33   1.0  
sp|P53894|CBK1_YEAST Serine/threonine-protein kinase CBK1 OS=Sac...    33   1.0  
sp|P42818|KPK1_ARATH Serine/threonine-protein kinase AtPK1/AtPK6...    33   1.3  
sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus m...    33   1.3  
sp|P43565|RIM15_YEAST Serine/threonine-protein kinase RIM15 OS=S...    32   1.8  
sp|P25341|KIN82_YEAST Probable serine/threonine-protein kinase K...    32   1.8  
sp|Q9V3I5|JIL1_DROME Chromosomal serine/threonine-protein kinase...    32   1.8  
sp|P31034|CBK1_KLULA Serine/threonine-protein kinase CBK1 OS=Klu...    32   1.8  
sp|Q6FP74|CBK1_CANGA Serine/threonine-protein kinase CBK1 OS=Can...    32   1.8  
sp|O42626|NRC2_NEUCR Serine/threonine-protein kinase nrc-2 OS=Ne...    32   2.3  
sp|Q10364|SCK2_SCHPO Serine/threonine-protein kinase sck2 OS=Sch...    32   3.0  
sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=P...    32   3.0  
sp|Q39030|KPK19_ARATH Serine/threonine-protein kinase AtPK19 OS=...    32   3.0  
sp|Q54Y26|NDRA_DICDI Probable serine/threonine-protein kinase nd...    31   3.9  
sp|P35626|ARBK2_HUMAN Beta-adrenergic receptor kinase 2 OS=Homo ...    31   3.9  
sp|P12688|YPK1_YEAST Serine/threonine-protein kinase YPK1 OS=Sac...    31   5.1  
sp|Q8N655|CJ012_HUMAN Uncharacterized protein C10orf12 OS=Homo s...    31   5.1  
sp|P15822|ZEP1_HUMAN Zinc finger protein 40 OS=Homo sapiens GN=H...    31   5.2  
sp|Q54UZ1|Y1639_DICDI Probable serine/threonine-protein kinase D...    30   6.7  
sp|P53739|KN8R_YEAST Probable serine/threonine-protein kinase YN...    30   6.7  

>sp|Q54IH8|NDRB_DICDI Probable serine/threonine-protein kinase ndrB
           OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1
          Length = 542

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           ++IG F G EEI+ HP+FKG  W+ L E
Sbjct: 421 TRIG-FNGVEEIQSHPFFKGVDWRRLRE 447


>sp|Q2LZZ7|ST38L_DROPS Serine/threonine-protein kinase 38-like
           OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3
           SV=1
          Length = 458

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 574 KIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           ++GS RG E++K  P+F+G  W+H+ E
Sbjct: 373 RLGSQRGLEDLKSVPFFRGVDWEHIRE 399


>sp|Q9NBK5|ST38L_DROME Serine/threonine-protein kinase 38-like
           OS=Drosophila melanogaster GN=trc PE=1 SV=1
          Length = 463

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 574 KIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           ++GS RG E++K  P+F+G  W+H+ E
Sbjct: 378 RLGSQRGLEDLKSVPFFRGVDWEHIRE 404


>sp|Q9Y2H1|ST38L_HUMAN Serine/threonine-protein kinase 38-like
           OS=Homo sapiens GN=STK38L PE=1 SV=3
          Length = 464

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           ++IG+  G EEIK HP+F+G  W+H+ E
Sbjct: 367 NRIGN-SGVEEIKGHPFFEGVDWEHIRE 393


>sp|Q6CFS5|CBK1_YARLI Serine/threonine-protein kinase CBK1
           OS=Yarrowia lipolytica GN=CBK1 PE=3 SV=1
          Length = 588

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           +++G   GA EIK HP+F+G  W  + E
Sbjct: 500 NRLGRIGGANEIKSHPFFRGVDWSSIRE 527


>sp|Q6BLJ9|CBK1_DEBHA Serine/threonine-protein kinase CBK1
           OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2
          Length = 716

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAW 509
           +++G + GA+E+K HP+F+G  W
Sbjct: 617 NRLGRYNGADELKSHPFFRGVDW 639


>sp|Q552E9|PKGA_DICDI Probable serine/threonine-protein kinase pkgA
            OS=Dictyostelium discoideum GN=pkgA PE=3 SV=1
          Length = 1367

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -3

Query: 562  FRGAEEIKKHPYFKGTAWK 506
            F GAEEIK HP+FK   WK
Sbjct: 1224 FNGAEEIKSHPFFKSINWK 1242


>sp|Q7TSE6|ST38L_MOUSE Serine/threonine-protein kinase 38-like
           OS=Mus musculus GN=Stk38l PE=1 SV=1
          Length = 464

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 556 GAEEIKKHPYFKGTAWKHLSE 494
           G EEIK HP+F+G  W H+ E
Sbjct: 373 GVEEIKGHPFFEGVDWGHIRE 393


>sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp.
           japonica GN=Os06g0291600 PE=2 SV=1
          Length = 589

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 574 KIGSFRGAEEIKKHPYFKGTAW 509
           ++G  RGA EIK+HP+F+G  W
Sbjct: 517 RLGCKRGATEIKQHPFFEGVNW 538


>sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp.
           indica GN=OsI_021818 PE=2 SV=1
          Length = 589

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 574 KIGSFRGAEEIKKHPYFKGTAW 509
           ++G  RGA EIK+HP+F+G  W
Sbjct: 517 RLGCKRGATEIKQHPFFEGVNW 538
tr_hit_id A6FJH1
Definition tr|A6FJH1|A6FJH1_9GAMM Putative uncharacterized protein OS=Moritella sp. PE36
Align length 54
Score (bit) 38.1
E-value 0.36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918317|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_B02.
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6FJH1|A6FJH1_9GAMM Putative uncharacterized protein OS=Morit...    38   0.36 
tr|Q7Y0S5|Q7Y0S5_RAPSA Protein kinase OS=Raphanus sativus GN=RsN...    37   0.61 
tr|A2BIB3|A2BIB3_DANRE Novel protein similar to vertebrate ribos...    37   0.80 
tr|Q9FIB7|Q9FIB7_ARATH Protein kinase OS=Arabidopsis thaliana PE...    37   0.80 
tr|Q93V54|Q93V54_ARATH Ndr kinase (Putative uncharacterized prot...    37   0.80 
tr|Q8LDG6|Q8LDG6_ARATH Protein kinase OS=Arabidopsis thaliana PE...    37   0.80 
tr|Q6BCU1|Q6BCU1_PHYPA Phototropin OS=Physcomitrella patens GN=P...    37   0.80 
tr|Q0GA16|Q0GA16_SOLLC Phototropin-2 OS=Solanum lycopersicum PE=...    37   0.80 
tr|A9T6N7|A9T6N7_PHYPA PHOTA1 phototropin A1 blue light photorec...    37   0.80 
tr|A7LI54|A7LI54_SOLLC Phototropin-2 OS=Solanum lycopersicum GN=...    37   0.80 
tr|Q5AP53|Q5AP53_CANAL Likely protein kinase OS=Candida albicans...    37   0.80 
tr|A3LQA3|A3LQA3_PICST Serine/threonine-protein kinase CBK1 (Fra...    37   0.80 
tr|Q2QQX0|Q2QQX0_ORYSJ Protein kinase, putative, expressed (Puta...    37   1.0  
tr|Q0INC7|Q0INC7_ORYSJ Os12g0480200 protein (Fragment) OS=Oryza ...    37   1.0  
tr|A2ZKH2|A2ZKH2_ORYSI Putative uncharacterized protein OS=Oryza...    37   1.0  
tr|Q5ZLR3|Q5ZLR3_CHICK Putative uncharacterized protein OS=Gallu...    36   1.4  
tr|Q5DW42|Q5DW42_PHAVU Phototropin OS=Phaseolus vulgaris GN=Pvph...    36   1.4  
tr|A9SX38|A9SX38_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.4  
tr|A9SCZ7|A9SCZ7_PHYPA Predicted protein (Fragment) OS=Physcomit...    36   1.4  
tr|A8HQF5|A8HQF5_CHLRE Serine/threonine protein kinase 19 OS=Chl...    36   1.4  
tr|B6LAM7|B6LAM7_BRAFL Putative uncharacterized protein OS=Branc...    36   1.4  
tr|Q6DIL2|Q6DIL2_XENTR Serine/threonine kinase 38 like OS=Xenopu...    36   1.8  
tr|Q9SYB9|Q9SYB9_ARATH At1g51170 OS=Arabidopsis thaliana GN=F23H...    36   1.8  
tr|Q9SJM3|Q9SJM3_ARATH Putative uncharacterized protein At2g3635...    36   1.8  
tr|Q6QJ35|Q6QJ35_ARATH Putative uncharacterized protein (Fragmen...    36   1.8  
tr|Q5DW43|Q5DW43_PHAVU Phototropin OS=Phaseolus vulgaris GN=Pvph...    36   1.8  
tr|O48547|O48547_MAIZE Nonphototropic hypocotyl 1 OS=Zea mays GN...    36   1.8  
tr|Q9ST26|Q9ST26_ORYSJ Nonphototrophic hypocotyl 1a OS=Oryza sat...    35   2.3  
tr|Q9SC66|Q9SC66_ORYSA Non-phototropic hypocotyl NPH1 OS=Oryza s...    35   2.3  
tr|Q5DW44|Q5DW44_PHAVU Phototropin OS=Phaseolus vulgaris GN=Pvph...    35   2.3  

>tr|A6FJH1|A6FJH1_9GAMM Putative uncharacterized protein
           OS=Moritella sp. PE36 GN=PE36_22635 PE=4 SV=1
          Length = 620

 Score = 38.1 bits (87), Expect = 0.36
 Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -3

Query: 415 GKDEPSIAGNPLSSSCQAN---AAAAIDKSVVLQAVDCEEKENLQEVTNFLPCY 263
           GKD P+ +  PL   CQ N   AA+ IDK++    VD  EKE     T+FL C+
Sbjct: 477 GKDNPNESQTPLGVRCQNNKKGAASIIDKNLKRNGVDMPEKEAF--CTDFLGCF 528


>tr|Q7Y0S5|Q7Y0S5_RAPSA Protein kinase OS=Raphanus sativus GN=RsNdr1
           PE=2 SV=1
          Length = 461

 Score = 37.4 bits (85), Expect = 0.61
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHLSE 494
           S++G+ RGAEEIK HP+F GT W  L E
Sbjct: 334 SRLGT-RGAEEIKTHPWFNGTQWDKLYE 360


>tr|A2BIB3|A2BIB3_DANRE Novel protein similar to vertebrate
           ribosomal protein S6 kinase family (RPS6KA) OS=Danio
           rerio GN=DKEY-273O13.5-001 PE=4 SV=1
          Length = 745

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -3

Query: 559 RGAEEIKKHPYFKGTAWKHLSE 494
           RGAEEIK HP+FKG  W  L+E
Sbjct: 261 RGAEEIKGHPFFKGLNWSDLAE 282


>tr|Q9FIB7|Q9FIB7_ARATH Protein kinase OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 495

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHL 500
           S++G+ RG EEIK HP+FKGT W  L
Sbjct: 388 SRLGT-RGVEEIKSHPWFKGTPWDKL 412


>tr|Q93V54|Q93V54_ARATH Ndr kinase (Putative uncharacterized protein
           At5g09890) OS=Arabidopsis thaliana GN=AtNdr1 PE=2 SV=1
          Length = 515

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHL 500
           S++G+ RG EEIK HP+FKGT W  L
Sbjct: 388 SRLGT-RGVEEIKSHPWFKGTPWDKL 412


>tr|Q8LDG6|Q8LDG6_ARATH Protein kinase OS=Arabidopsis thaliana PE=2
           SV=1
          Length = 515

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAWKHL 500
           S++G+ RG EEIK HP+FKGT W  L
Sbjct: 388 SRLGT-RGVEEIKSHPWFKGTPWDKL 412


>tr|Q6BCU1|Q6BCU1_PHYPA Phototropin OS=Physcomitrella patens GN=PHOTA1
            PE=2 SV=1
          Length = 1070

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 574  KIGSFRGAEEIKKHPYFKGTAW 509
            ++GS+RGA +IK HP+F+G  W
Sbjct: 1003 RLGSYRGANDIKNHPFFRGIKW 1024


>tr|Q0GA16|Q0GA16_SOLLC Phototropin-2 OS=Solanum lycopersicum PE=2
           SV=1
          Length = 952

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAW 509
           S++GS  GA EIK+HP+F+G AW
Sbjct: 888 SRLGSNGGASEIKEHPFFRGIAW 910


>tr|A9T6N7|A9T6N7_PHYPA PHOTA1 phototropin A1 blue light photoreceptor
            OS=Physcomitrella patens subsp. patens GN=PHOTA1 PE=4
            SV=1
          Length = 1070

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 574  KIGSFRGAEEIKKHPYFKGTAW 509
            ++GS+RGA +IK HP+F+G  W
Sbjct: 1003 RLGSYRGANDIKNHPFFRGIKW 1024


>tr|A7LI54|A7LI54_SOLLC Phototropin-2 OS=Solanum lycopersicum
           GN=PHOT2 PE=2 SV=1
          Length = 952

 Score = 37.0 bits (84), Expect = 0.80
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = -3

Query: 577 SKIGSFRGAEEIKKHPYFKGTAW 509
           S++GS  GA EIK+HP+F+G AW
Sbjct: 888 SRLGSNGGASEIKEHPFFRGIAW 910