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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918322
Clone id YMU001_000112_B07
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAATGTTGAGAGTTCCTCGTCGAAAAGCAATCCAGTTGTATAGAAACTTTTGGTGCCATT
GCTTCTTCTTTTTCTCTGGTTGTTGTTTACCTTTGTTCTTGGATTCTTCCTTTGGGGTTG
GCCCTGCTCCTTTGGTGAACTTAACTGATTGACTTTCACCTTCGTATTTGATAAGCACTG
ATTTAGAACTCTAGTCAATCATTGCATTGTATTGCTTCTGCCATGGTTGTCCTAGCAATA
ATGGATGTTGTGTAGCTTGGTCTTCAACCACGTAAAACATATGAGGATACACATATTGGT
TAATCTGTATATGTAAAACTGTGCATCCGACAGTTTTGATTGAATTCTTAGAGTAACTCT
TTAACTCTTGCTTAGCAGTTTGTAATTTAGTGTCATTTGTCAATTGTCCATACAAAC
■■Homology search results ■■ -
sp_hit_id P10394
Definition sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster
Align length 66
Score (bit) 34.3
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918322|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_B07.
         (417 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    34   0.20 
sp|Q6DGS3|KC2D2_DANRE Calcium/calmodulin-dependent protein kinas...    32   1.3  
sp|Q54QH3|ODR4_DICDI Protein odr-4 homolog OS=Dictyostelium disc...    31   1.7  
sp|Q88VK7|IF2_LACPL Translation initiation factor IF-2 OS=Lactob...    30   2.9  
sp|Q66H65|N42L2_RAT NEDD4-binding protein 2-like 2 OS=Rattus nor...    30   3.8  
sp|Q9ZQC5|ICR2_ARATH Interactor of constitutive active ROPs 2, c...    30   3.8  
sp|P22315|HEMH_MOUSE Ferrochelatase, mitochondrial OS=Mus muscul...    30   3.8  
sp|O02491|HMEN_ANOGA Segmentation polarity homeobox protein engr...    29   6.4  
sp|Q96Q89|MPPH1_HUMAN M-phase phosphoprotein 1 OS=Homo sapiens G...    29   8.4  

>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
           transposon 412 OS=Drosophila melanogaster GN=POL PE=4
           SV=1
          Length = 1237

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -3

Query: 379 TAKQELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPL----LLGQPWQKQ 212
           T K  ++   +  I++ G T + IQ  +YV PH F++V+      P+    ++G  + K+
Sbjct: 84  TNKINIQGIGQQKIQSRGQTFIEIQTGKYVIPHDFHLVD---KNFPIPCDGIIGIDFIKK 140

Query: 211 YNAMID 194
           YN  ID
Sbjct: 141 YNCQID 146


>sp|Q6DGS3|KC2D2_DANRE Calcium/calmodulin-dependent protein kinase
           type II delta 2 chain OS=Danio rerio GN=camk2d2 PE=2
           SV=2
          Length = 554

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -1

Query: 189 VLNQCLSNTKV--KVNQLSSPKEQGQPQRKNPRTKVNNNQRKRRSNGTKSFYTTGLLFDE 16
           +LN+     KV  K N  SSPK+ G      P+T V +N   R    T+S  TT  + DE
Sbjct: 319 LLNKKPDGVKVNNKTNLASSPKDTGPAPALEPQTTVIHNPVDRNKESTESANTT--IEDE 376

Query: 15  EL 10
           +L
Sbjct: 377 DL 378


>sp|Q54QH3|ODR4_DICDI Protein odr-4 homolog OS=Dictyostelium
           discoideum GN=DDB_G0283829 PE=3 SV=1
          Length = 456

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/74 (24%), Positives = 27/74 (36%)
 Frame = -1

Query: 270 WLKTKLHNIHYC*DNHGRSNTMQ*LTRVLNQCLSNTKVKVNQLSSPKEQGQPQRKNPRTK 91
           WL  K+    Y   N     T+    +++N  L  T  K+N + S K        N    
Sbjct: 336 WLSNKISICDYLSSN----GTIDDCYKIINDLLQITSPKINSIESSKNNNNNNNNNNNNN 391

Query: 90  VNNNQRKRRSNGTK 49
            NNN    + +  K
Sbjct: 392 NNNNNNNSKLSNKK 405


>sp|Q88VK7|IF2_LACPL Translation initiation factor IF-2
           OS=Lactobacillus plantarum GN=infB PE=3 SV=1
          Length = 858

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -1

Query: 228 NHGRSNTMQ*LTRVLNQCLSNTKV-KVNQLSSPKEQGQPQRKNPRTKVNNNQRK-RRSNG 55
           N  RSN      R  N   SNT   + N   +    G   R N RT  NNN     RSNG
Sbjct: 147 NTNRSNNNNNNNRSNNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSNRSNG 206

Query: 54  TKSFYTTG 31
           + +    G
Sbjct: 207 SNNSSRNG 214


>sp|Q66H65|N42L2_RAT NEDD4-binding protein 2-like 2 OS=Rattus
           norvegicus GN=N4bp2l2 PE=2 SV=1
          Length = 574

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 183 NQCLSNTKVKVNQLSSPKEQGQ-PQRKNPRTKVNNNQRKRRSNGTKSFYTTGLLFDEELS 7
           ++  S +K  +  +  P E+ +  +RKN     NN   KRR    + F +  L  D ELS
Sbjct: 113 DEIYSTSKAFIGPIYKPPEKKKCRERKNETATFNNTDSKRRQEEKQKFNSKKLEIDTELS 172


>sp|Q9ZQC5|ICR2_ARATH Interactor of constitutive active ROPs 2,
           chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1
          Length = 583

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 168 NTKVKVNQLSSPKEQGQPQRKNPRTKVNNNQRKR 67
           NTK++  +  SPK      R++PRT VN  Q+KR
Sbjct: 41  NTKIRTPKTQSPKVVAD--RRSPRTPVNEIQKKR 72


>sp|P22315|HEMH_MOUSE Ferrochelatase, mitochondrial OS=Mus musculus
           GN=Fech PE=1 SV=2
          Length = 420

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -1

Query: 225 HGRSNTMQ*LTRVLNQCLSNTKVKVNQLSSPKEQGQPQRKNPRTKV-NNNQRKRRSNGTK 49
           HG S   Q         ++ T  KV+   + K Q QP+R+ P+T +   N     + G  
Sbjct: 25  HGSSRACQPWRCQSGAAVAATTEKVHHAKTTKPQAQPERRKPKTGILMLNMGGPETLGEV 84

Query: 48  SFYTTGLLFDEELSTL 1
             +   L  D +L TL
Sbjct: 85  QDFLQRLFLDRDLMTL 100


>sp|O02491|HMEN_ANOGA Segmentation polarity homeobox protein
           engrailed OS=Anopheles gambiae GN=en PE=2 SV=3
          Length = 594

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 156 KVNQLSSPKEQGQPQRKNPRTKVNNNQRKRRSN 58
           +  +   PKE+G  + K PRT  +N Q +R  N
Sbjct: 481 RYRRTKQPKEKGDSEEKRPRTAFSNAQLQRLKN 513


>sp|Q96Q89|MPPH1_HUMAN M-phase phosphoprotein 1 OS=Homo sapiens
           GN=MPHOSPH1 PE=1 SV=2
          Length = 1820

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
 Frame = -3

Query: 415 LYGQLTNDTKLQTAKQELKSYSK------NSIKTVGCTVLHIQINQYVYPHMFYVVEDQA 254
           LYG LTN   +   ++ +K Y +      NSIK           N+Y+Y  +F  V  + 
Sbjct: 236 LYGSLTNSLNISEFEESIKDYEQANLNMANSIKFSVWVSFFEIYNEYIY-DLFVPVSSKF 294

Query: 253 TQHPLLLGQPWQKQYNAMID*SSKSV--------LIKYEGESQSVKFTK 131
            +  +L      K Y+ + D     V        L+K   + QSV FTK
Sbjct: 295 QKRKMLRLSQDVKGYSFIKDLQWIQVSDSKEAYRLLKLGIKHQSVAFTK 343
tr_hit_id A5B8Y5
Definition tr|A5B8Y5|A5B8Y5_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 86
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918322|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_B07.
         (417 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5B8Y5|A5B8Y5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A8NJK9|A8NJK9_COPC7 Putative uncharacterized protein OS=Copri...    35   1.4  
tr|Q7XLB2|Q7XLB2_ORYSJ OSJNBa0011K22.17 protein OS=Oryza sativa ...    35   2.4  
tr|Q6MWI2|Q6MWI2_ORYSA B1159F04.18 protein (OSIGBa0137O04.1 prot...    35   2.4  
tr|A5BFW1|A5BFW1_VITVI Putative uncharacterized protein OS=Vitis...    34   3.2  
tr|A5AT08|A5AT08_VITVI Putative uncharacterized protein OS=Vitis...    34   3.2  
tr|Q8I0V9|Q8I0V9_PLAF7 MRNA cleavage factor-like protein, putati...    33   5.4  
tr|A2QE18|A2QE18_ASPNC Putative uncharacterized protein OS=Asper...    33   5.4  
tr|B0JXD6|B0JXD6_MICAN Putative uncharacterized protein OS=Micro...    33   7.1  
tr|A5AEG5|A5AEG5_VITVI Putative uncharacterized protein OS=Vitis...    33   7.1  
tr|A6SIP6|A6SIP6_BOTFB Putative uncharacterized protein OS=Botry...    33   7.1  
tr|A6SDN1|A6SDN1_BOTFB Putative uncharacterized protein OS=Botry...    33   7.1  
tr|Q8MXR5|Q8MXR5_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.2  
tr|Q8MXR4|Q8MXR4_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.2  
tr|Q8IU02|Q8IU02_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.2  
tr|Q54H00|Q54H00_DICDI Putative uncharacterized protein OS=Dicty...    33   9.2  
tr|B4LJJ3|B4LJJ3_DROVI GJ20245 OS=Drosophila virilis GN=GJ20245 ...    33   9.2  
tr|A9D2P7|A9D2P7_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.2  
tr|A2FMY1|A2FMY1_TRIVA TKL family protein kinase OS=Trichomonas ...    33   9.2  
tr|A5JEL2|A5JEL2_9MICR Putative uncharacterized protein OS=Nosem...    33   9.2  
tr|Q9FE41|Q9FE41_ORYSJ Similar to Arabidopsis thaliana chromosom...    33   9.2  
tr|A9TEX2|A9TEX2_PHYPA Pectinesterase (Fragment) OS=Physcomitrel...    33   9.2  
tr|A9SC12|A9SC12_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.2  
tr|A5CBR1|A5CBR1_VITVI Putative uncharacterized protein OS=Vitis...    33   9.2  
tr|A2ZPJ1|A2ZPJ1_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A6QSC4|A6QSC4_AJECN Putative uncharacterized protein OS=Ajell...    33   9.2  

>tr|A5B8Y5|A5B8Y5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028809 PE=4 SV=1
          Length = 1399

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 22/86 (25%), Positives = 40/86 (46%)
 Frame = -3

Query: 409 GQLTNDTKLQTAKQELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPLLLG 230
           G   N   L T    + +Y   S K +G + + + I    +P +F V+    T   LLLG
Sbjct: 336 GSTLNVCPLATTIATILAYDSTSRKVMGTSEIELLIGPTTFPTLFQVLRI-LTSFNLLLG 394

Query: 229 QPWQKQYNAMID*SSKSVLIKYEGES 152
           +PW  +  A++    + V   ++G++
Sbjct: 395 RPWIHRAGAILSFLHQKVKFIHDGQT 420


>tr|A8NJK9|A8NJK9_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_11870 PE=4 SV=1
          Length = 2173

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 325 CTVLHIQINQYVYPHMFYVVEDQATQHPLLLGQPWQKQYNAMID 194
           C  + + I  + + H F+V  D    H  +LGQPW + + A ID
Sbjct: 694 CKDVSLVIGGHNFDHYFFVSRDDMETHDCILGQPWIQWFAARID 737


>tr|Q7XLB2|Q7XLB2_ORYSJ OSJNBa0011K22.17 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0011K22.17 PE=4 SV=2
          Length = 551

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -3

Query: 310 IQINQYVYPHMFYVVE-DQATQHPLLLGQPWQKQYNAMID*SSKSVLIKYEGESQSVKFT 134
           ++I  +  P  F V++ D   + PL+LG+P+     A ID    S+     G+ +S+ F 
Sbjct: 422 VKIRDFFIPVDFVVLDMDMGKETPLILGRPFLSTAGANIDVGMGSIRFDINGKEKSLSFI 481

Query: 133 KG-AGPT 116
           +G A PT
Sbjct: 482 RGRAEPT 488


>tr|Q6MWI2|Q6MWI2_ORYSA B1159F04.18 protein (OSIGBa0137O04.1
           protein) OS=Oryza sativa GN=B1159F04.18 PE=4 SV=1
          Length = 551

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -3

Query: 310 IQINQYVYPHMFYVVE-DQATQHPLLLGQPWQKQYNAMID*SSKSVLIKYEGESQSVKFT 134
           ++I  +  P  F V++ D   + PL+LG+P+     A ID    S+     G+ +S+ F 
Sbjct: 422 VKIRDFFIPVDFVVLDMDMGKETPLILGRPFLSTAGANIDVGMGSIRFDINGKEKSLSFI 481

Query: 133 KG-AGPT 116
           +G A PT
Sbjct: 482 RGRAEPT 488


>tr|A5BFW1|A5BFW1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_014250 PE=4 SV=1
          Length = 566

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/80 (26%), Positives = 40/80 (50%)
 Frame = -3

Query: 370 QELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPLLLGQPWQKQYNAMID* 191
           Q +++Y       +G    H+ I    Y  +F V++ Q++ + LLLG PW  + +A+   
Sbjct: 260 QTVRAYDGTQRTVMGIITTHVMIGPVRYSVLFQVLKIQSSFN-LLLGCPWIHEADAIPSS 318

Query: 190 SSKSVLIKYEGESQSVKFTK 131
             + V   +EG   S++F +
Sbjct: 319 LHQKVKFIHEGRVISIQFDR 338


>tr|A5AT08|A5AT08_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_029446 PE=4 SV=1
          Length = 757

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/80 (25%), Positives = 43/80 (53%)
 Frame = -3

Query: 370 QELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPLLLGQPWQKQYNAMID* 191
           Q +++Y     + +G  V+ +QI   ++  +F V+   A+ + LLLG+PW  +  A+   
Sbjct: 542 QTVRAYDSTKGEVMGTLVIDLQIGPAIFSTLFQVLRIPASFN-LLLGRPWIHRARAIPSS 600

Query: 190 SSKSVLIKYEGESQSVKFTK 131
             + V   ++G+  +V+ T+
Sbjct: 601 LHQKVKFIHDGQVITVQSTR 620


>tr|Q8I0V9|Q8I0V9_PLAF7 MRNA cleavage factor-like protein, putative
           OS=Plasmodium falciparum (isolate 3D7) GN=PFA0450c PE=4
           SV=1
          Length = 232

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
 Frame = -3

Query: 382 QTAKQELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPLLLG--QPWQKQY 209
           +  K+ + +Y+KN I+     +  I  ++Y YPH+  +   ++ ++ LL G  + W+K  
Sbjct: 51  EKCKKRINAYNKNGIRNSVLAI--ILCHRYEYPHLLLLQHIESQKYYLLNGKYKTWEKPK 108

Query: 208 NAMID*SSKSVLIKYEGESQSVKFTKGAGPTPKEES 101
             +     K  L KY  + + + FT       +EE+
Sbjct: 109 EVL-----KKKLQKYINKIKDIHFTPAQINKEQEET 139


>tr|A2QE18|A2QE18_ASPNC Putative uncharacterized protein
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An02g09033 PE=4 SV=1
          Length = 197

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +3

Query: 39  YRNFWCHCFFFFSGCCLPLFL-DSSFGVGPAPLVNLTD*LSPSYLISTDLEL*SIIALYC 215
           + N  CH    FS    PLFL  SSF V P  L+ L D   P    S++  L  +     
Sbjct: 125 FSNLPCH-LSSFSSYYFPLFLLHSSFSVSPVSLLTLPD--RPFCFPSSNQRL-FVSPSLP 180

Query: 216 FCHGCPSNN--GCCVAW 260
           FCH C ++    CC+ W
Sbjct: 181 FCHHCHASQLFMCCLCW 197


>tr|B0JXD6|B0JXD6_MICAN Putative uncharacterized protein
           OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_19410
           PE=4 SV=1
          Length = 747

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
 Frame = -3

Query: 412 YGQLTNDTKLQTAKQE--LKSYSKNSIKTV---GCTVLHIQINQYVYPHMFYVVEDQATQ 248
           YG L   TK+  A+++  LK Y + + K +   G  +    IN   YP +F+       Q
Sbjct: 285 YGNLLKATKIFYAERQELLKLYKQEAQKALNNFGFQLREKSINSQEYPELFWTPSISIEQ 344

Query: 247 HPLLLGQPWQKQYNAMID*SSKSVLIKYEGE 155
            P+L GQ  + +   +I   SK  + K   E
Sbjct: 345 TPILFGQGERGEKREIIKGLSKGGVYKRHRE 375


>tr|A5AEG5|A5AEG5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017169 PE=4 SV=1
          Length = 1600

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/80 (23%), Positives = 40/80 (50%)
 Frame = -3

Query: 370 QELKSYSKNSIKTVGCTVLHIQINQYVYPHMFYVVEDQATQHPLLLGQPWQKQYNAMID* 191
           Q +++Y     + +G  ++ +QI    +  +F V+    T   LLLG+PW     A++  
Sbjct: 387 QTVRAYDSTKREVMGTLMIDLQIGPATFSTLFQVMRIP-TSFNLLLGRPWIHVAGAILSS 445

Query: 190 SSKSVLIKYEGESQSVKFTK 131
             + V   ++G+  +V+ T+
Sbjct: 446 LHQKVKFIHDGQVITVRSTR 465