BP918324 |
Clone id |
YMU001_000112_B09 |
Library |
YMU01 |
Length |
441 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_B09. |
Accession |
BP918324 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TATAAATCTCTTTTACAGGATGATAGTTCCGGGTTTCCAAAACCTCAATCAGAAGCGGCA GCCGTAGACTTGAGTTACATGTAGAATGCACTCCTATATATGTATCATGTGTATTAGAAC AACAAGCACACACCGACATTGGACAATGCAGAGAGGTAGGAGACTATGCCAACCTCTCAG CTCCGCACGTGAGGCTTAGGCTGGCTTCAATGTCAAATTTCCATACCAACATTCTCTTGG AATAGCCATGTGTGAAAGCAGACACGCCGCATGGCAATGTCATGCAGCTTCGCTCACCCG TGTTCCGCGTCCATTGCACATTCGCTCTCCCCGAGAAGGAGACCGCCGATACCGGAAGCT CCACATTACATGAAAGTAGAACTTCTCCAGTGATTGTAGGCGAGCTACCACCCCCTCCAT CCTTCATCGTTGAGGCTAGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6MG97 |
Definition |
sp|Q6MG97|BTNL2_RAT Butyrophilin-like protein 2 OS=Rattus norvegicus |
Align length |
95 |
Score (bit) |
34.3 |
E-value |
0.23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918324|Adiantum capillus-veneris mRNA, clone: YMU001_000112_B09. (441 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6MG97|BTNL2_RAT Butyrophilin-like protein 2 OS=Rattus norveg... 34 0.23 sp|O70355|BTNL2_MOUSE Butyrophilin-like protein 2 OS=Mus musculu... 34 0.23 sp|P13837|G156_PARPR G surface protein, allelic form 156 OS=Para... 32 1.2 sp|P53429|G3P1_GIALA Glyceraldehyde-3-phosphate dehydrogenase 1 ... 31 2.6 sp|P17053|G168_PARPR G surface protein, allelic form 168 OS=Para... 29 7.5 sp|O42414|NFASC_CHICK Neurofascin OS=Gallus gallus GN=NFASC PE=1... 29 9.8 sp|Q8IV50|LYSM2_HUMAN LysM and putative peptidoglycan-binding do... 29 9.8 sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit ... 29 9.8 sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit ... 29 9.8
>sp|Q6MG97|BTNL2_RAT Butyrophilin-like protein 2 OS=Rattus norvegicus GN=Btnl2 PE=3 SV=1 Length = 454
Score = 34.3 bits (77), Expect = 0.23 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 9/95 (9%) Frame = -3
Query: 409 GSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERSCMTLPCGVSAFTHGYSKRM 230 GS+P IT EVL +L ++ + R +VQW +R TLP AF G + Sbjct: 362 GSTPQITREVLKDGGTQLRCTSDGWFPRPHVQWR----DRDGRTLPSFSEAFRQGSQELF 417
Query: 229 LVWKF---------DIEASLSLTCGAERLA*SPTS 152 V ++ S+SL G E+ A P S Sbjct: 418 QVETLLLVTNGSMVNVTCSISLPLGEEKTARFPLS 452
>sp|O70355|BTNL2_MOUSE Butyrophilin-like protein 2 OS=Mus musculus GN=Btnl2 PE=2 SV=2 Length = 454
Score = 34.3 bits (77), Expect = 0.23 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 9/95 (9%) Frame = -3
Query: 409 GSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERSCMTLPCGVSAFTHGYSKRM 230 GS+P IT EVL ++L ++ + R +VQW G+ T+P AF G + Sbjct: 362 GSTPRITREVLKDGGMQLRCTSDGWFPRPHVQWRDRDGK----TMPSFSEAFQQGSQELF 417
Query: 229 LVWKF---------DIEASLSLTCGAERLA*SPTS 152 V ++ S+SL G E+ A P S Sbjct: 418 QVETLLLVTNGSMVNVTCSISLPLGQEKTARFPLS 452
>sp|P13837|G156_PARPR G surface protein, allelic form 156 OS=Paramecium primaurelia GN=156G PE=2 SV=1 Length = 2715
Score = 32.0 bits (71), Expect = 1.2 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%) Frame = -3
Query: 430 TMKDGGGGSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERS------CMTLPC 269 T G ++ T T ++ +C V + R WT +G R+ C T C Sbjct: 2552 TQSTATGAAAGTGTCALMTACTVANNDQTACQAARDRCSWTAASGTRATAVASKCATHTC 2611
Query: 268 GVSAFTHGYSKRMLVWKFDIEASLSLTCGA 179 + T+G R L W + +L GA Sbjct: 2612 ATNQATNGACTRFLNWDKKTQQVCTLVSGA 2641
>sp|P53429|G3P1_GIALA Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1 Length = 337
Score = 30.8 bits (68), Expect = 2.6 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = -3
Query: 208 EASLSLTCGAERLA*SPTSLHCPMSVCACCSNTHD---TYIGVHSTCNSSLRLPLLIEV 41 +A L +T G +R+ S S PM VC C T+D + +++C ++ PL + V Sbjct: 106 DAELHITGGCKRVIISAPSADAPMFVCGCNLETYDPSTMKVISNASCTTNCLAPLAMVV 164
>sp|P17053|G168_PARPR G surface protein, allelic form 168 OS=Paramecium primaurelia GN=168G PE=2 SV=1 Length = 2704
Score = 29.3 bits (64), Expect = 7.5 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Frame = -3
Query: 430 TMKDGGGGSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERS------CMTLPC 269 T G ++ T T ++ +C V + R WT +G + C T C Sbjct: 2541 TQSTATGAAAGTGTCALMTACTVANNDQTACQAARDRCSWTAASGTGATAVASKCATHTC 2600
Query: 268 GVSAFTHGYSKRMLVWKFDIEASLSLTCGA 179 + T+G R L W + +L GA Sbjct: 2601 ATNQATNGACTRFLNWDKKTQQVCTLVSGA 2630
>sp|O42414|NFASC_CHICK Neurofascin OS=Gallus gallus GN=NFASC PE=1 SV=1 Length = 1369
Score = 28.9 bits (63), Expect = 9.8 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = +3
Query: 90 TPIYVSCVLEQQAHTDIGQCRE----VG----DYANLSAPHVRLRLASMSNFHTNILLE* 245 TPIYV ++ QA D G+ E +G DY + VR+R+ + T I L Sbjct: 806 TPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLN----STAIALTW 861
Query: 246 PCVKADTPHGNVMQLRSPVFR 308 V DT G + + R+ +R Sbjct: 862 TRVHLDTIQGQLKEYRAYFWR 882
>sp|Q8IV50|LYSM2_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens GN=LYSMD2 PE=1 SV=1 Length = 215
Score = 28.9 bits (63), Expect = 9.8 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +3
Query: 330 PEKETADTGSSTLHESRTSPVIVGELPPPPS 422 PE ETAD S E PV+ GE PPPS Sbjct: 134 PENETADNSFSQEEE----PVVAGEDLPPPS 160
>sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1 Length = 312
Score = 28.9 bits (63), Expect = 9.8 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = -3
Query: 436 ASTMKDGGGGSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERS 287 AS KDG TGE L NVE P++ ++FS N W ERS Sbjct: 210 ASGGKDGAALLWDLSTGEQLFKINVESPINQIAFS--PNRFWMCVATERS 257
>sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1 Length = 312
Score = 28.9 bits (63), Expect = 9.8 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = -3
Query: 436 ASTMKDGGGGSSPTITGEVLLSCNVELPVSAVSFSGRANVQWTRNTGERS 287 AS KDG TGE L NVE P++ ++FS N W ERS Sbjct: 210 ASGGKDGAALLWDLSTGEQLFKINVESPINQIAFS--PNRFWMCVATERS 257
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RC65 |
Definition |
tr|A9RC65|A9RC65_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
63 |
Score (bit) |
41.6 |
E-value |
0.02 |
Report |
|