BP918336 [AcEST]

BP918336
Clone id	YMU001_000112_C11
Library	YMU01
Length	505
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000112_C11.
Accession	BP918336
Tissue type	prothallium
Developmental stage	-
Contig ID	CL1363Contig1
Sequence	CAAAATGGAAATAAATGCATGGAATGCCTTCTCACCCCCCACGCTTCCAACATCAGCATC TCGCAGCTTCAAGGCAACTCAGCAAAGGTAAAATACTCCTGAGATTCACAACAAAATGGA AATAAGTGCATGGAATGCTTTCTCACCCCCCACGCCCGGAACCTCCCCTAGTTCGTGCAA CTCTCTTGCAACCTTTTGGAGCCGGGCTGAGCTTACTGCATGGCATCTGACCACAATTCA ATGTGGCCTCTTGCTTGAAGTCCATCTCCTCGCTAGTAATCAGGCATCAAGACTCATGCA CTCGTCGACATTGAAACTCTCTGCAAAATGAGAATTTAAAGCCATTCTGAAAGACACAAC TATTATATACAAATACTCCCCCTGTCCTCTTCACATGCGAAACGCAACCAGCGCATAAGA ATCTCATTAAACGTGCACTGACTCCCCTGCACAATCAGCACAGAAACCATGCGACCATTA ACACCCTCGTCCACACGTTGGAGTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918336\|Adiantum capillus-veneris mRNA, clone: YMU001_000112_C11. (505 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q4SDD4
Definition	tr\|Q4SDD4\|Q4SDD4_TETNG Chromosome 3 SCAF14639, whole genome shotgun sequence OS=Tetraodon nigroviridis
Align length	52
Score (bit)	35.0
E-value	2.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP918336\|Adiantum capillus-veneris mRNA, clone: YMU001_000112_C11. (505 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q4SDD4\|Q4SDD4_TETNG Chromosome 3 SCAF14639, whole genome shot... 35 2.0 tr\|Q4S3H9\|Q4S3H9_TETNG Chromosome 2 SCAF14750, whole genome shot... 34 3.5 >tr\|Q4SDD4\|Q4SDD4_TETNG Chromosome 3 SCAF14639, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00020093001 PE=4 SV=1 Length = 1139 Score = 35.0 bits (79), Expect = 2.0 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +3 Query: 150 PRPEPPLVRAT--LLQP-FGAGLSLLHGIPQFNVASCLKSISSLVIRHQDS 296 P P PP R+T LL+P +G G + G P + VA ++ SL +RH+D+ Sbjct: 467 PSPPPPPGRSTSLLLRPDYGGGAAAARGPAPSYRVALAAQTHGSLPVRHEDA 518 >tr\|Q4S3H9\|Q4S3H9_TETNG Chromosome 2 SCAF14750, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00024642001 PE=4 SV=1 Length = 1016 Score = 34.3 bits (77), Expect = 3.5 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%) Frame = +2 Query: 353 DTTIIYKYSPCPLHMRNATSAES-H*TCTDSPAQ--SAQKPC 472 +T II K +PCP M+N+TS+ E+ H D+P Q S+ +PC Sbjct: 938 ETIIICKLTPCPGTMQNSTSSVEAMHQRAPDNPVQKISSNEPC 980