BP918341
Clone id YMU001_000112_D04
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCCTAAAGGTNACCACTTGGCAGATAATATATGTTGTGTTGCACATCCCATGTAGATGG
TAAACCAGTATGTAAGTCATTAAAAAAAACATTGATGTATTCTTGAAGAAACTCCTTCCC
TTGCAGAGGCATCTTTAACTTGAGTATCCCTGACTTTGGTGTCGTGCCTGTTAATCAATG
CTACCTTCTAACAATGTGACATGGCCATTTGTGGAAGATTGAGCTTCTTAACTGAATTAT
AGTTAAGAAAATTCGTGATTTTCTCAAAAAAAAGGAAATTTGCTATAGTTAAGAAAATTC
ATGATTTTCTTGAAAAAAAGGAACTTTGCTACAATTCTCTTGAATTTGTTGTAGCTTGTT
ATGATTTCAATGAGGAACTTGAGAATCAATCTACGTGCACATTGTTATGCCCTTGTCTGC
ACACAAATAACTACTTAAAAAAGATGGGCCTTCATTCTAACACAAATAATTAAACATCAA
GTACTTTAGTACACAATGTGATTTGCACTTGGGGGCCTAGGA
■■Homology search results ■■ -
sp_hit_id Q6TND0
Definition sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii
Align length 28
Score (bit) 30.8
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918341|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D04.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1 31 4.0
sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1 31 4.0
sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorgh... 30 6.9
sp|P83118|MTH11_DROME Probable G-protein coupled receptor Mth-li... 30 9.0
sp|Q86JF2|LVSB_DICDI BEACH domain-containing protein lvsB OS=Dic... 30 9.0
sp|Q07606|T4BB_BACCO Restriction enzyme BgcI subunit beta OS=Bac... 30 9.1

>sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1
Length = 512

Score = 30.8 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2

Query: 368 EIITSYNKFKRIVAKFLFFKKIMNFLNY 285
E+I SYNK + I A F FF+ +LNY
Sbjct: 122 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 149


>sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1
Length = 509

Score = 30.8 bits (68), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2

Query: 368 EIITSYNKFKRIVAKFLFFKKIMNFLNY 285
E+I SYNK + I A F FF+ +LNY
Sbjct: 119 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 146


>sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorghum
bicolor PE=1 SV=2
Length = 960

Score = 30.0 bits (66), Expect = 6.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3

Query: 261 FSKKRKFAIVKKIHDFLEKKELCYNSL 341
FS+ + A+ KI +FLE ELCY SL
Sbjct: 388 FSEISEDAVFTKIEEFLEPLELCYKSL 414


>sp|P83118|MTH11_DROME Probable G-protein coupled receptor Mth-like
11 OS=Drosophila melanogaster GN=mthl11 PE=2 SV=2
Length = 510

Score = 29.6 bits (65), Expect = 9.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Frame = -2

Query: 104 KNTSMFFLMTYILVY-------HLHGMCNTTYIICQVVTF 6
K +S+FF++ I Y LHG C Y IC +TF
Sbjct: 233 KFSSVFFMVITIAAYLWLPKFRSLHGKCCNLYFICLAITF 272


>sp|Q86JF2|LVSB_DICDI BEACH domain-containing protein lvsB
OS=Dictyostelium discoideum GN=lvsB PE=4 SV=1
Length = 4118

Score = 29.6 bits (65), Expect = 9.0
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3

Query: 243 LRKFVIFSKKRKFAIVKKIHDFLEKK---ELCYNSLEFVVACYDFNEELENQSTCTLLCP 413
L K ++FS K +I K +HD K + NS+ F+ +++ T T L
Sbjct: 503 LNKIILFSIKSSTSITKLLHDDFTKANGYSILLNSMIFISDYGTLKNKIDYIQTTTNLLF 562

Query: 414 CLHTNNYLKK 443
H ++YL K
Sbjct: 563 IGHRSSYLDK 572


>sp|Q07606|T4BB_BACCO Restriction enzyme BgcI subunit beta
OS=Bacillus coagulans GN=bcgIB PE=1 SV=1
Length = 341

Score = 29.6 bits (65), Expect = 9.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -1

Query: 144 LKLKMPLQGKEFLQEYINVFFNDLHTGLPSTWDVQHN 34
LK+ +P++G+E +Y+N + + + + + +DVQ N
Sbjct: 131 LKILLPIKGEEPDWDYMNTYISKILSNMEKNFDVQQN 167


tr_hit_id Q7YYI3
Definition tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein OS=Cryptosporidium parvum
Align length 38
Score (bit) 33.1
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918341|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D04.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein OS=Crypt... 33 8.5
tr|Q5CX84|Q5CX84_CRYPV Putative uncharacterized protein OS=Crypt... 33 8.5

>tr|Q7YYI3|Q7YYI3_CRYPV Putative uncharacterized protein
OS=Cryptosporidium parvum GN=1MB.209 PE=4 SV=1
Length = 1412

Score = 33.1 bits (74), Expect = 8.5
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3

Query: 276 KFAIVKKIHDFLEKKELCYNSLEFVVACYDFNEELENQ 389
KFA+ +I+ LEKK++ SLE+ + YD +++LE++
Sbjct: 1197 KFAVKNRINFSLEKKQIILISLEYRIWKYDIHKQLESK 1234


>tr|Q5CX84|Q5CX84_CRYPV Putative uncharacterized protein
OS=Cryptosporidium parvum Iowa II GN=cgd6_2100 PE=4 SV=1
Length = 1645

Score = 33.1 bits (74), Expect = 8.5
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3

Query: 276 KFAIVKKIHDFLEKKELCYNSLEFVVACYDFNEELENQ 389
KFA+ +I+ LEKK++ SLE+ + YD +++LE++
Sbjct: 1304 KFAVKNRINFSLEKKQIILISLEYRIWKYDIHKQLESK 1341