BP918342
Clone id YMU001_000112_D05
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCATCTATAAGCCAGAACTTGGTTTTTCCCCTTTGAACCCGAATTCAAAAGCACAGCCTC
TGATTCTGCTCTACTAATTAGTGCATGTATTGTGCCTTCACAACCTGTATCAATAGACAT
CACCTCGTCCCAGACATCCTTGTTCCACGTATGCACCTGTGTGTACTTTGGCAATGTTGA
GTCAAAGGGACTAGCTTTCACACATGCTCCTTTGTCCTGATCTGAGTATGCCCTGTTATA
CTGCATGTATACATTGCTTCTACGACGGCTGGCTCTTGTCGCTAATCTTGTATGTAGTTG
AATCTCTGACTTTTTATCCGTTAAGCTGAGTAGGGCAAAAAGCAGGCTGCAACTTCATTT
GCCTTCTCCTCAGTAAGGGATGGGCTTACTCTCTTTATCGAGTGTACAAGCTCTGACCCT
GATCCATACTGATAACAACGGATTTTTCCTAGCCAGTGATTCTACCAATTTGAATGTTTC
TGAATCCTCTTCATAGAAAAGTGAT
■■Homology search results ■■ -
sp_hit_id Q1DY43
Definition sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1 OS=Coccidioides immitis
Align length 44
Score (bit) 33.9
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918342|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D05.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1 OS=Coccidio... 34 0.45
sp|Q9NZ08|ERAP1_HUMAN Endoplasmic reticulum aminopeptidase 1 OS=... 31 2.9
sp|Q2LVL0|MSBA_SYNAS Lipid A export ATP-binding/permease protein... 31 3.7
sp|P25464|ACVS_CEPAC N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-... 31 3.7
sp|P37502|YYBB_BACSU Uncharacterized protein yybB OS=Bacillus su... 30 4.9

>sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1
OS=Coccidioides immitis GN=MPH1 PE=3 SV=1
Length = 1110

Score = 33.9 bits (76), Expect = 0.45
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2

Query: 26 FPFEPEFKSTASDSALLISACIVPSQPVSIDITSSQTSLFHVCT 157
F FEPEF TA +LIS+ PSQ + T+SQ++ F T
Sbjct: 229 FDFEPEFTETADKEPILISSQPRPSQNTTRRPTASQSTSFRQTT 272


>sp|Q9NZ08|ERAP1_HUMAN Endoplasmic reticulum aminopeptidase 1
OS=Homo sapiens GN=ERAP1 PE=1 SV=3
Length = 941

Score = 31.2 bits (69), Expect = 2.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 12/47 (25%)
Frame = -2

Query: 216 DKGACV--------KASPFDSTLPKYTQVHTW----NKDVWDEVMSI 112
DKGAC+ A F S + +Y Q H++ N+D+WD + SI
Sbjct: 439 DKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASI 485


>sp|Q2LVL0|MSBA_SYNAS Lipid A export ATP-binding/permease protein
msbA OS=Syntrophus aciditrophicus (strain SB) GN=msbA
PE=3 SV=1
Length = 601

Score = 30.8 bits (68), Expect = 3.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3

Query: 258 FYDGWLLSLILYVVESLTFYPLS*VGQK 341
FY W L++I +V LT YP++ GQK
Sbjct: 169 FYRDWQLAIIAMIVFPLTIYPIAKFGQK 196


>sp|P25464|ACVS_CEPAC
N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine
synthase OS=Cephalosporium acremonium GN=PCBAB PE=1 SV=1
Length = 3712

Score = 30.8 bits (68), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3

Query: 201 HMLLCPDLSMPCYTACIHCFYDGWLLSLI 287
+++L PD C +C H DGW L L+
Sbjct: 1013 YLILLPDSKYSCLFSCHHAILDGWSLPLL 1041


>sp|P37502|YYBB_BACSU Uncharacterized protein yybB OS=Bacillus
subtilis GN=yybB PE=4 SV=1
Length = 220

Score = 30.4 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -2

Query: 186 FDSTLPKYTQVHTWNKDVWDEVMSIDTGCE----GTIHALISRAESEAVLLNSG 37
F+ +P VHTW D+V +DTG E I A ++ +A+LL G
Sbjct: 15 FELDVPLRIPVHTWFIKDGDDVYIVDTGIERFADAQIRAALAIGNPKAILLTHG 68


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918342|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D05.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******