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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918346
Clone id YMU001_000112_D09
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGCCATGTGCAGGGCTGTTGGAATAAATTTGTATCTATGGGATTCATAACGGAGCGTGT
CATAAAGATTTGATGTTCGTTGTTGGGGGCGTGAGGTTTATCATGGGGAAGAAGAAAAAG
GATTTGCAGATTAGGTTTCATATCCTCTGCACTCTACTGCAAGAATGCACGTAAGCAAGT
GTGAGCAGGTGAGAACTTAATGAGGCTGTCCTGTAGTGTCTATTGGTATATGGTCTCAGC
TTAGTGGATGTGTGTATTTTTGGGTCGTGTCATTGTCGGTTACTTGCAGATGAGTTGCGT
GAGGTCATGTCAAATCGATCGTTTCAGACTATCAACTATGCAGACTGCAACTGTGCTTTT
TTGGTGAGTTGGTGGGGCAAGGGCTTCAGAGCTTGAACTATGAATGGAATCCCTTGAATG
TGTTATGCTTGTAGTATGTTTGGTTTTTTGCCGCCTTTTCAGTAATAACATACTATCAGA
TTTTGTTATTCGTCGCA
■■Homology search results ■■ -
sp_hit_id P46062
Definition sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated protein 1 OS=Mus musculus
Align length 38
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918346|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D09.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated pr...    32   1.2  
sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated pr...    32   1.2  
sp|O60292|SI1L3_HUMAN Signal-induced proliferation-associated 1-...    32   1.2  
sp|O35412|SI1L1_RAT Signal-induced proliferation-associated 1-li...    32   1.6  
sp|Q8C0T5|SI1L1_MOUSE Signal-induced proliferation-associated 1-...    32   1.6  
sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated 1-...    32   1.6  
sp|Q5JCS6|SI1L2_RAT Signal-induced proliferation-associated 1-li...    30   4.7  
sp|Q80TE4|SI1L2_MOUSE Signal-induced proliferation-associated 1-...    30   4.7  
sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated 1-...    30   6.1  
sp|Q19V61|NU4C_CHLAT NAD(P)H-quinone oxidoreductase chain 4, chl...    30   6.1  
sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sap...    30   8.0  
sp|Q9H0R3|TM222_HUMAN Transmembrane protein 222 OS=Homo sapiens ...    30   8.0  

>sp|P46062|SIPA1_MOUSE Signal-induced proliferation-associated
           protein 1 OS=Mus musculus GN=Sipa1 PE=2 SV=2
          Length = 1037

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +I+F +    P+ PNN+ Q+   R + N I T +FQ+P
Sbjct: 398 EIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVFQEP 435


>sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated
           protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1
          Length = 1042

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +I+F +    P+ PNN+ Q+   R + N I T +FQ+P
Sbjct: 403 EIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVFQEP 440


>sp|O60292|SI1L3_HUMAN Signal-induced proliferation-associated
           1-like protein 3 OS=Homo sapiens GN=SIPA1L3 PE=1 SV=3
          Length = 1781

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 141 MKPNLQILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           M  + +I+F +    P+ PNN  Q+   R + N I T +FQ+P
Sbjct: 688 MYQDYEIMFHVSTLLPYTPNNRQQLLRKRHIGNDIVTIIFQEP 730


>sp|O35412|SI1L1_RAT Signal-induced proliferation-associated 1-like
           protein 1 OS=Rattus norvegicus GN=Sipa1l1 PE=2 SV=1
          Length = 1822

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +I+F +    P+ PNN+ Q+   R + N I T +FQ+P
Sbjct: 720 EIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEP 757


>sp|Q8C0T5|SI1L1_MOUSE Signal-induced proliferation-associated
           1-like protein 1 OS=Mus musculus GN=Sipa1l1 PE=1 SV=2
          Length = 1782

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +I+F +    P+ PNN+ Q+   R + N I T +FQ+P
Sbjct: 681 EIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEP 718


>sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated
           1-like protein 1 OS=Homo sapiens GN=SIPA1L1 PE=1 SV=4
          Length = 1804

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +I+F +    P+ PNN+ Q+   R + N I T +FQ+P
Sbjct: 681 EIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEP 718


>sp|Q5JCS6|SI1L2_RAT Signal-induced proliferation-associated 1-like
           protein 2 OS=Rattus norvegicus GN=Sipa1l2 PE=2 SV=1
          Length = 1722

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 132 NLQILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           + +++F +    P+ PNN  Q+   R + N I T +FQ+P
Sbjct: 676 DFELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEP 715


>sp|Q80TE4|SI1L2_MOUSE Signal-induced proliferation-associated
           1-like protein 2 OS=Mus musculus GN=Sipa1l2 PE=1 SV=2
          Length = 1722

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 132 NLQILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           + +++F +    P+ PNN  Q+   R + N I T +FQ+P
Sbjct: 676 DFELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEP 715


>sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated
           1-like protein 2 OS=Homo sapiens GN=SIPA1L2 PE=1 SV=2
          Length = 1722

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 126 QILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           +++F +    P+ PNN  Q+   R + N I T +FQ+P
Sbjct: 677 ELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEP 714


>sp|Q19V61|NU4C_CHLAT NAD(P)H-quinone oxidoreductase chain 4,
           chloroplastic OS=Chlorokybus atmophyticus GN=ndhD PE=3
           SV=2
          Length = 512

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +3

Query: 336 LCRLQLCFFGELVGQGLQSLNYEWNPLNVLCL*YVWFFAAFSV 464
           L  L + F+G++V   +++L  +  PLN+  L Y+ F  A++V
Sbjct: 180 LAGLTMAFYGDIVTFDMRALKLKEYPLNLEILLYIGFLIAYAV 222
tr_hit_id B6M1C2
Definition tr|B6M1C2|B6M1C2_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 40
Score (bit) 33.1
E-value 7.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918346|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D09.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6M1C2|B6M1C2_BRAFL Putative uncharacterized protein (Fragmen...    33   7.5  
tr|Q7VRH4|Q7VRH4_BLOFL Cytochrome o ubiquinol oxidase subunit II...    33   9.8  

>tr|B6M1C2|B6M1C2_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_216835 PE=4 SV=1
          Length = 560

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 132 NLQILFLLPHDKPHAPNNEHQIFMTRSVMNPIDTNLFQQP 13
           N +++F +    P+ PNN  Q+   R + N I T +FQ+P
Sbjct: 194 NCEVMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIVFQEP 233


>tr|Q7VRH4|Q7VRH4_BLOFL Cytochrome o ubiquinol oxidase subunit III
           OS=Blochmannia floridanus GN=cyoC PE=3 SV=1
          Length = 196

 Score = 32.7 bits (73), Expect = 9.8
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 191 ENLMRLSC-SVYWYMVSA*WMCVFLGRVIVGYL 286
           +NL+RL C S++W+ +   W+CVF    ++G L
Sbjct: 164 QNLIRLHCFSLFWHFLDIIWICVFTEVYLIGVL 196