BP918347
Clone id YMU001_000112_D11
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACGCGTTGAAGTTGAGAAGGTGACATTTTCGGATCCACGCCTACGTGACAATTCATATTG
GACCAAGGATGGAGCTGAAAAAGGCTATGGTGCCAAAGCACAGGAAGTGCTGGGACAAGT
TCGCGGAAGGGATTTTCGTCATGAGAAGACGAAGAAAAAGCGCGGTTCTTATAGAGGAGG
ATTTATTGGCTTGCAATCACACTCCATCAAATTTGAAGATTTTGAGGAGGGTGGGAATGG
CCTTGGCCAGTTGTGAAACAGATTGGAGGGGGTGAGAAATGAAAATGTCTCTGCTCTCCA
ACTATCTGTATTGAAGCCCATTTTCTCTGAATGCCTTGCTGGCTGTGCTAGGGCAAATGT
CTAAAGATGGTCTTTTGCGGTTACAAGATGCTCGTGTGGAGCTTCAAGAGCTTCATAATG
AGCTCAAGTTGGTATTCTAGAGAAGTGATGGCTGAACGAGGTGGTGGTGAATTTTGCACT
GTGATTTTACCTCAT
■■Homology search results ■■ -
sp_hit_id Q14978
Definition sp|Q14978|NOLC1_HUMAN Nucleolar phosphoprotein p130 OS=Homo sapiens
Align length 72
Score (bit) 73.9
E-value 4.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918347|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D11.
(495 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q14978|NOLC1_HUMAN Nucleolar phosphoprotein p130 OS=Homo sapi... 74 4e-13
sp|P41777|NOLC1_RAT Nucleolar phosphoprotein p130 OS=Rattus norv... 74 5e-13
sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces ... 70 7e-12
sp|Q9P785|YNY5_SCHPO LisH domain-containing protein C1711.05 OS=... 58 2e-08
sp|B1ATL7|CX064_HUMAN Uncharacterized protein CXorf64 OS=Homo sa... 35 0.25
sp|P23471|PTPRZ_HUMAN Receptor-type tyrosine-protein phosphatase... 32 1.2
sp|Q62656|PTPRZ_RAT Receptor-type tyrosine-protein phosphatase z... 32 2.1
sp|Q00900|ZEP2_RAT Human immunodeficiency virus type I enhancer-... 30 7.9
sp|P08327|NRAM_I74A1 Neuraminidase OS=Influenza A virus (strain ... 30 7.9

>sp|Q14978|NOLC1_HUMAN Nucleolar phosphoprotein p130 OS=Homo sapiens
GN=NOLC1 PE=1 SV=2
Length = 699

Score = 73.9 bits (180), Expect = 4e-13
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV E++ D R+ DNS+ K GA +G +A +VL +G+ FRHEKTKKKRGSYRGG
Sbjct: 627 RVREEEIEV-DSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGG 685

Query: 182 FIGLQSHSIKFE 217
I +Q +SIKF+
Sbjct: 686 SISVQVNSIKFD 697


>sp|P41777|NOLC1_RAT Nucleolar phosphoprotein p130 OS=Rattus
norvegicus GN=Nolc1 PE=1 SV=1
Length = 704

Score = 73.6 bits (179), Expect = 5e-13
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV E++ D R+ DNS+ K GA +G +A +VL +G+ FRHEKTKKKRGSYRGG
Sbjct: 632 RVREEEIEV-DSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGG 690

Query: 182 FIGLQSHSIKFE 217
I +Q +S+KF+
Sbjct: 691 SISVQVNSVKFD 702


>sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces
cerevisiae GN=SRP40 PE=1 SV=2
Length = 406

Score = 69.7 bits (169), Expect = 7e-12
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV+ K+ F L DN+Y GA +G KA E LG+VRG+DF K K KRGSYRGG
Sbjct: 337 RVDRSKINFEAWELTDNTY---KGAAGTWGEKANEKLGRVRGKDFTKNKNKMKRGSYRGG 393

Query: 182 FIGLQSHSIKFED 220
I L+S S KF+D
Sbjct: 394 SITLESGSYKFQD 406


>sp|Q9P785|YNY5_SCHPO LisH domain-containing protein C1711.05
OS=Schizosaccharomyces pombe GN=SPBC1711.05 PE=2 SV=1
Length = 451

Score = 58.2 bits (139), Expect = 2e-08
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2

Query: 26 FSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGFIGLQSHS 205
F+ P LRDNS+ E YG A L RG+ FR EK KKKRGSYRGG I + S
Sbjct: 393 FASPALRDNSF----NFEDDYGTLANRDLIVTRGKGFRQEKNKKKRGSYRGGRINTEVRS 448

Query: 206 IKF 214
KF
Sbjct: 449 FKF 451


>sp|B1ATL7|CX064_HUMAN Uncharacterized protein CXorf64 OS=Homo
sapiens GN=CXorf64 PE=4 SV=1
Length = 298

Score = 34.7 bits (78), Expect = 0.25
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -1

Query: 288 TFSFLTPSNLFHNWPRPFPPSSKSSNLMECDCK----PINPPL*EP 163
+F P + HNWPRP P SS + L C P PP+ P
Sbjct: 212 SFPLRGPCHPMHNWPRPIPLSSSTPGLPSCSTVHCFIPPRPPIFNP 257


>sp|P23471|PTPRZ_HUMAN Receptor-type tyrosine-protein phosphatase zeta
OS=Homo sapiens GN=PTPRZ1 PE=1 SV=3
Length = 2314

Score = 32.3 bits (72), Expect = 1.2
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2

Query: 38 RLRDNSYWTKDGAEKGYG-----AKAQEVLGQVRGRDFRHEKTKKKRGSYRG---GFIGL 193
R + + YW DG+E+ YG K+ +VL R+F TK K+GS +G G +
Sbjct: 1833 RRKCDQYWPADGSEE-YGNFLVTQKSVQVLAYYTVRNFTLRNTKIKKGSQKGRPSGRVVT 1891

Query: 194 QSHSIKFED 220
Q H ++ D
Sbjct: 1892 QYHYTQWPD 1900


>sp|Q62656|PTPRZ_RAT Receptor-type tyrosine-protein phosphatase zeta
OS=Rattus norvegicus GN=Ptprz1 PE=1 SV=1
Length = 2316

Score = 31.6 bits (70), Expect = 2.1
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2

Query: 38 RLRDNSYWTKDGAEKGYGA-----KAQEVLGQVRGRDFRHEKTKKKRGSYRG---GFIGL 193
R + + YW DG+E+ YG+ K +VL R+F TK K+GS +G G +
Sbjct: 1835 RRKCDQYWPTDGSEE-YGSFLVNQKNVQVLAYYTVRNFTLRNTKIKKGSQKGRSSGRLVT 1893

Query: 194 QSHSIKFED 220
Q H ++ D
Sbjct: 1894 QYHYTQWPD 1902


>sp|Q00900|ZEP2_RAT Human immunodeficiency virus type I
enhancer-binding protein 2 homolog OS=Rattus norvegicus
GN=Hivep2 PE=2 SV=2
Length = 2437

Score = 29.6 bits (65), Expect = 7.9
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2

Query: 380 PQKTIFRHLP*HSQQGIQRKWASIQIVGEQRHFHFSPPPICFTTGQGHSHPPQNLQI 210
P +F HLP HSQQ ++ + + G Q H PP I HPP L +
Sbjct: 2197 PTDYVFSHLPLHSQQQVRAPIPMVPVGGIQM-VHSLPPAI------SGLHPPPTLPL 2246


>sp|P08327|NRAM_I74A1 Neuraminidase OS=Influenza A virus (strain
A/Equine/Cor/16/1974 H7N7) GN=NA PE=3 SV=1
Length = 469

Score = 29.6 bits (65), Expect = 7.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -2

Query: 170 KNRAFSSSSHDENPFRELVPA---LPVLWHHSLFQLHPWSNMNCHVGVD 33
+N+ +S++HD FR L+ P +S F WS+ +CH GV+
Sbjct: 138 RNKHSNSTTHDRTAFRGLISTPLGSPPTVSNSEFICVGWSSTSCHDGVN 186


tr_hit_id A7QUB2
Definition tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole genome shotgun sequence OS=Vitis vinifera
Align length 71
Score (bit) 120.0
E-value 3.0e-26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918347|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_D11.
(495 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole geno... 120 3e-26
tr|Q761Y3|Q761Y3_ORYSJ BRI1-KD interacting protein 132 (Fragment... 119 8e-26
tr|Q2QM87|Q2QM87_ORYSJ Os12g0613500 protein OS=Oryza sativa subs... 119 8e-26
tr|A3CJE4|A3CJE4_ORYSJ Putative uncharacterized protein OS=Oryza... 119 8e-26
tr|A2ZMP5|A2ZMP5_ORYSI Putative uncharacterized protein OS=Oryza... 119 8e-26
tr|A9SS86|A9SS86_PHYPA Predicted protein OS=Physcomitrella paten... 112 9e-24
tr|Q9LU74|Q9LU74_ARATH Arabidopsis thaliana genomic DNA, chromos... 100 6e-20
tr|Q93WC7|Q93WC7_ARATH AT5g57120/MUL3_6 OS=Arabidopsis thaliana ... 100 6e-20
tr|Q8LFX8|Q8LFX8_ARATH Putative uncharacterized protein OS=Arabi... 100 6e-20
tr|A5C3Y6|A5C3Y6_VITVI Putative uncharacterized protein (Fragmen... 96 7e-19
tr|B7PKZ9|B7PKZ9_IXOSC BRI1-KD interacting protein, putative OS=... 81 2e-14
tr|B8JIY2|B8JIY2_DANRE Nucleolar and coiled-body phosphoprotein ... 76 1e-12
tr|Q5KBM9|Q5KBM9_CRYNE Chaperone, putative OS=Cryptococcus neofo... 75 2e-12
tr|Q55N97|Q55N97_CRYNE Putative uncharacterized protein OS=Crypt... 75 2e-12
tr|Q5R5R0|Q5R5R0_PONAB Putative uncharacterized protein DKFZp459... 74 4e-12
tr|Q96J17|Q96J17_HUMAN NOLC1 protein OS=Homo sapiens GN=NOLC1 PE... 74 4e-12
tr|B2RAU8|B2RAU8_HUMAN cDNA, FLJ95131, highly similar to Homo sa... 74 4e-12
tr|Q8CE21|Q8CE21_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12
tr|Q6ZQK6|Q6ZQK6_MOUSE MKIAA0035 protein (Fragment) OS=Mus muscu... 74 5e-12
tr|Q3UI16|Q3UI16_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12
tr|Q3TKZ9|Q3TKZ9_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12
tr|Q0IIG0|Q0IIG0_BOVIN Nucleolar and coiled-body phosphoprotein ... 73 6e-12
tr|B3S4R0|B3S4R0_TRIAD Putative uncharacterized protein OS=Trich... 72 1e-11
tr|Q3U6W2|Q3U6W2_MOUSE Putative uncharacterized protein OS=Mus m... 72 1e-11
tr|Q28EK2|Q28EK2_XENTR Novel protein containing SRP40 C-terminal... 72 2e-11
tr|A0NEB5|A0NEB5_ANOGA AGAP005369-PA OS=Anopheles gambiae GN=AGA... 72 2e-11
tr|Q91803|Q91803_XENLA Nucleolar phosphoprotein OS=Xenopus laevi... 70 7e-11
tr|B5VMN4|B5VMN4_YEAS6 YKR092Cp-like protein OS=Saccharomyces ce... 70 7e-11
tr|B3LRG6|B3LRG6_YEAS1 Putative uncharacterized protein OS=Sacch... 70 7e-11
tr|A7A051|A7A051_YEAS7 Nucleolar, serine-rich protein with a rol... 70 7e-11

>tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006766001
PE=4 SV=1
Length = 580

Score = 120 bits (302), Expect = 3e-26
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++++V F+D RL+DNSYW K GA+ GYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGG
Sbjct: 504 RVKIDEVEFADQRLQDNSYWAKGGADSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGG 563

Query: 182 FIGLQSHSIKF 214
I LQ+HSIKF
Sbjct: 564 QIDLQTHSIKF 574


>tr|Q761Y3|Q761Y3_ORYSJ BRI1-KD interacting protein 132 (Fragment)
OS=Oryza sativa subsp. japonica GN=bip132 PE=2 SV=1
Length = 287

Score = 119 bits (298), Expect = 8e-26
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG
Sbjct: 211 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 270

Query: 182 FIGLQSHSIKFED 220
I LQ+HSIKF D
Sbjct: 271 QIDLQTHSIKFND 283


>tr|Q2QM87|Q2QM87_ORYSJ Os12g0613500 protein OS=Oryza sativa subsp.
japonica GN=Os12g0613500 PE=2 SV=2
Length = 448

Score = 119 bits (298), Expect = 8e-26
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG
Sbjct: 372 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 431

Query: 182 FIGLQSHSIKFED 220
I LQ+HSIKF D
Sbjct: 432 QIDLQTHSIKFND 444


>tr|A3CJE4|A3CJE4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_035416 PE=4 SV=1
Length = 430

Score = 119 bits (298), Expect = 8e-26
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG
Sbjct: 354 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 413

Query: 182 FIGLQSHSIKFED 220
I LQ+HSIKF D
Sbjct: 414 QIDLQTHSIKFND 426


>tr|A2ZMP5|A2ZMP5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_39099 PE=4 SV=1
Length = 431

Score = 119 bits (298), Expect = 8e-26
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG
Sbjct: 355 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 414

Query: 182 FIGLQSHSIKFED 220
I LQ+HSIKF D
Sbjct: 415 QIDLQTHSIKFND 427


>tr|A9SS86|A9SS86_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_233976 PE=4 SV=1
Length = 678

Score = 112 bits (280), Expect = 9e-24
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV+VE+V D RL DNSYW K GAE+G+GAKAQE+LGQVRG+ FRHEKTKKKRGSY+GG
Sbjct: 601 RVKVEEVEIKDARLADNSYWAKSGAEEGWGAKAQEILGQVRGKGFRHEKTKKKRGSYKGG 660

Query: 182 FIGLQSHSIKFED 220
I SHSIKF++
Sbjct: 661 IIDNASHSIKFQN 673


>tr|Q9LU74|Q9LU74_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MUL3 (AT5g57120/MUL3_6) OS=Arabidopsis
thaliana GN=At5g57120 PE=2 SV=1
Length = 330

Score = 99.8 bits (247), Expect = 6e-20
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG
Sbjct: 256 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 312

Query: 182 FIGLQSHSIKFED 220
I +SHS KF +
Sbjct: 313 LIDQESHSTKFNN 325


>tr|Q93WC7|Q93WC7_ARATH AT5g57120/MUL3_6 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 182

Score = 99.8 bits (247), Expect = 6e-20
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG
Sbjct: 108 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 164

Query: 182 FIGLQSHSIKFED 220
I +SHS KF +
Sbjct: 165 LIDQESHSTKFNN 177


>tr|Q8LFX8|Q8LFX8_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 330

Score = 99.8 bits (247), Expect = 6e-20
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG
Sbjct: 256 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 312

Query: 182 FIGLQSHSIKFED 220
I +SHS KF +
Sbjct: 313 LIDQESHSTKFNN 325


>tr|A5C3Y6|A5C3Y6_VITVI Putative uncharacterized protein (Fragment)
OS=Vitis vinifera GN=VITISV_015753 PE=4 SV=1
Length = 902

Score = 96.3 bits (238), Expect = 7e-19
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +2

Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181
RV++++V F+D RL+DNSYW K GA+ GYGAKAQE+LGQVRGR F ++ +K +YRGG
Sbjct: 829 RVKIDEVEFADQRLQDNSYWAKGGADSGYGAKAQEILGQVRGRIFAMKRPRKSVAAYRGG 888

Query: 182 FIGLQSHSIKF 214
I LQ+HS+KF
Sbjct: 889 QIDLQTHSVKF 899