BP918347 |
Clone id |
YMU001_000112_D11 |
Library |
YMU01 |
Length |
495 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_D11. |
Accession |
BP918347 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACGCGTTGAAGTTGAGAAGGTGACATTTTCGGATCCACGCCTACGTGACAATTCATATTG GACCAAGGATGGAGCTGAAAAAGGCTATGGTGCCAAAGCACAGGAAGTGCTGGGACAAGT TCGCGGAAGGGATTTTCGTCATGAGAAGACGAAGAAAAAGCGCGGTTCTTATAGAGGAGG ATTTATTGGCTTGCAATCACACTCCATCAAATTTGAAGATTTTGAGGAGGGTGGGAATGG CCTTGGCCAGTTGTGAAACAGATTGGAGGGGGTGAGAAATGAAAATGTCTCTGCTCTCCA ACTATCTGTATTGAAGCCCATTTTCTCTGAATGCCTTGCTGGCTGTGCTAGGGCAAATGT CTAAAGATGGTCTTTTGCGGTTACAAGATGCTCGTGTGGAGCTTCAAGAGCTTCATAATG AGCTCAAGTTGGTATTCTAGAGAAGTGATGGCTGAACGAGGTGGTGGTGAATTTTGCACT GTGATTTTACCTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q14978 |
Definition |
sp|Q14978|NOLC1_HUMAN Nucleolar phosphoprotein p130 OS=Homo sapiens |
Align length |
72 |
Score (bit) |
73.9 |
E-value |
4.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QUB2 |
Definition |
tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
71 |
Score (bit) |
120.0 |
E-value |
3.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918347|Adiantum capillus-veneris mRNA, clone: YMU001_000112_D11. (495 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole geno... 120 3e-26 tr|Q761Y3|Q761Y3_ORYSJ BRI1-KD interacting protein 132 (Fragment... 119 8e-26 tr|Q2QM87|Q2QM87_ORYSJ Os12g0613500 protein OS=Oryza sativa subs... 119 8e-26 tr|A3CJE4|A3CJE4_ORYSJ Putative uncharacterized protein OS=Oryza... 119 8e-26 tr|A2ZMP5|A2ZMP5_ORYSI Putative uncharacterized protein OS=Oryza... 119 8e-26 tr|A9SS86|A9SS86_PHYPA Predicted protein OS=Physcomitrella paten... 112 9e-24 tr|Q9LU74|Q9LU74_ARATH Arabidopsis thaliana genomic DNA, chromos... 100 6e-20 tr|Q93WC7|Q93WC7_ARATH AT5g57120/MUL3_6 OS=Arabidopsis thaliana ... 100 6e-20 tr|Q8LFX8|Q8LFX8_ARATH Putative uncharacterized protein OS=Arabi... 100 6e-20 tr|A5C3Y6|A5C3Y6_VITVI Putative uncharacterized protein (Fragmen... 96 7e-19 tr|B7PKZ9|B7PKZ9_IXOSC BRI1-KD interacting protein, putative OS=... 81 2e-14 tr|B8JIY2|B8JIY2_DANRE Nucleolar and coiled-body phosphoprotein ... 76 1e-12 tr|Q5KBM9|Q5KBM9_CRYNE Chaperone, putative OS=Cryptococcus neofo... 75 2e-12 tr|Q55N97|Q55N97_CRYNE Putative uncharacterized protein OS=Crypt... 75 2e-12 tr|Q5R5R0|Q5R5R0_PONAB Putative uncharacterized protein DKFZp459... 74 4e-12 tr|Q96J17|Q96J17_HUMAN NOLC1 protein OS=Homo sapiens GN=NOLC1 PE... 74 4e-12 tr|B2RAU8|B2RAU8_HUMAN cDNA, FLJ95131, highly similar to Homo sa... 74 4e-12 tr|Q8CE21|Q8CE21_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12 tr|Q6ZQK6|Q6ZQK6_MOUSE MKIAA0035 protein (Fragment) OS=Mus muscu... 74 5e-12 tr|Q3UI16|Q3UI16_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12 tr|Q3TKZ9|Q3TKZ9_MOUSE Putative uncharacterized protein OS=Mus m... 74 5e-12 tr|Q0IIG0|Q0IIG0_BOVIN Nucleolar and coiled-body phosphoprotein ... 73 6e-12 tr|B3S4R0|B3S4R0_TRIAD Putative uncharacterized protein OS=Trich... 72 1e-11 tr|Q3U6W2|Q3U6W2_MOUSE Putative uncharacterized protein OS=Mus m... 72 1e-11 tr|Q28EK2|Q28EK2_XENTR Novel protein containing SRP40 C-terminal... 72 2e-11 tr|A0NEB5|A0NEB5_ANOGA AGAP005369-PA OS=Anopheles gambiae GN=AGA... 72 2e-11 tr|Q91803|Q91803_XENLA Nucleolar phosphoprotein OS=Xenopus laevi... 70 7e-11 tr|B5VMN4|B5VMN4_YEAS6 YKR092Cp-like protein OS=Saccharomyces ce... 70 7e-11 tr|B3LRG6|B3LRG6_YEAS1 Putative uncharacterized protein OS=Sacch... 70 7e-11 tr|A7A051|A7A051_YEAS7 Nucleolar, serine-rich protein with a rol... 70 7e-11
>tr|A7QUB2|A7QUB2_VITVI Chromosome chr11 scaffold_177, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006766001 PE=4 SV=1 Length = 580
Score = 120 bits (302), Expect = 3e-26 Identities = 55/71 (77%), Positives = 64/71 (90%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++++V F+D RL+DNSYW K GA+ GYGAKAQE+LGQVRGRDFRHEKTKKKRGSYRGG Sbjct: 504 RVKIDEVEFADQRLQDNSYWAKGGADSGYGAKAQEILGQVRGRDFRHEKTKKKRGSYRGG 563
Query: 182 FIGLQSHSIKF 214 I LQ+HSIKF Sbjct: 564 QIDLQTHSIKF 574
>tr|Q761Y3|Q761Y3_ORYSJ BRI1-KD interacting protein 132 (Fragment) OS=Oryza sativa subsp. japonica GN=bip132 PE=2 SV=1 Length = 287
Score = 119 bits (298), Expect = 8e-26 Identities = 56/73 (76%), Positives = 63/73 (86%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG Sbjct: 211 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 270
Query: 182 FIGLQSHSIKFED 220 I LQ+HSIKF D Sbjct: 271 QIDLQTHSIKFND 283
>tr|Q2QM87|Q2QM87_ORYSJ Os12g0613500 protein OS=Oryza sativa subsp. japonica GN=Os12g0613500 PE=2 SV=2 Length = 448
Score = 119 bits (298), Expect = 8e-26 Identities = 56/73 (76%), Positives = 63/73 (86%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG Sbjct: 372 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 431
Query: 182 FIGLQSHSIKFED 220 I LQ+HSIKF D Sbjct: 432 QIDLQTHSIKFND 444
>tr|A3CJE4|A3CJE4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_035416 PE=4 SV=1 Length = 430
Score = 119 bits (298), Expect = 8e-26 Identities = 56/73 (76%), Positives = 63/73 (86%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG Sbjct: 354 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 413
Query: 182 FIGLQSHSIKFED 220 I LQ+HSIKF D Sbjct: 414 QIDLQTHSIKFND 426
>tr|A2ZMP5|A2ZMP5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_39099 PE=4 SV=1 Length = 431
Score = 119 bits (298), Expect = 8e-26 Identities = 56/73 (76%), Positives = 63/73 (86%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++E V F+D RL+DNSYW K GA+ GYGAKAQEVLGQVRGR FRHEKTKKKRG+YRGG Sbjct: 355 RVKLEDVKFADDRLQDNSYWAKGGADSGYGAKAQEVLGQVRGRGFRHEKTKKKRGTYRGG 414
Query: 182 FIGLQSHSIKFED 220 I LQ+HSIKF D Sbjct: 415 QIDLQTHSIKFND 427
>tr|A9SS86|A9SS86_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233976 PE=4 SV=1 Length = 678
Score = 112 bits (280), Expect = 9e-24 Identities = 52/73 (71%), Positives = 61/73 (83%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV+VE+V D RL DNSYW K GAE+G+GAKAQE+LGQVRG+ FRHEKTKKKRGSY+GG Sbjct: 601 RVKVEEVEIKDARLADNSYWAKSGAEEGWGAKAQEILGQVRGKGFRHEKTKKKRGSYKGG 660
Query: 182 FIGLQSHSIKFED 220 I SHSIKF++ Sbjct: 661 IIDNASHSIKFQN 673
>tr|Q9LU74|Q9LU74_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL3 (AT5g57120/MUL3_6) OS=Arabidopsis thaliana GN=At5g57120 PE=2 SV=1 Length = 330
Score = 99.8 bits (247), Expect = 6e-20 Identities = 48/73 (65%), Positives = 58/73 (79%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG Sbjct: 256 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 312
Query: 182 FIGLQSHSIKFED 220 I +SHS KF + Sbjct: 313 LIDQESHSTKFNN 325
>tr|Q93WC7|Q93WC7_ARATH AT5g57120/MUL3_6 OS=Arabidopsis thaliana PE=2 SV=1 Length = 182
Score = 99.8 bits (247), Expect = 6e-20 Identities = 48/73 (65%), Positives = 58/73 (79%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG Sbjct: 108 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 164
Query: 182 FIGLQSHSIKFED 220 I +SHS KF + Sbjct: 165 LIDQESHSTKFNN 177
>tr|Q8LFX8|Q8LFX8_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 330
Score = 99.8 bits (247), Expect = 6e-20 Identities = 48/73 (65%), Positives = 58/73 (79%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV V+++ +++ NSY++K GAE GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG Sbjct: 256 RVNVDEIVYTE---NSNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 312
Query: 182 FIGLQSHSIKFED 220 I +SHS KF + Sbjct: 313 LIDQESHSTKFNN 325
>tr|A5C3Y6|A5C3Y6_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_015753 PE=4 SV=1 Length = 902
Score = 96.3 bits (238), Expect = 7e-19 Identities = 43/71 (60%), Positives = 57/71 (80%) Frame = +2
Query: 2 RVEVEKVTFSDPRLRDNSYWTKDGAEKGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGG 181 RV++++V F+D RL+DNSYW K GA+ GYGAKAQE+LGQVRGR F ++ +K +YRGG Sbjct: 829 RVKIDEVEFADQRLQDNSYWAKGGADSGYGAKAQEILGQVRGRIFAMKRPRKSVAAYRGG 888
Query: 182 FIGLQSHSIKF 214 I LQ+HS+KF Sbjct: 889 QIDLQTHSVKF 899
|