BP918351
Clone id YMU001_000112_E03
Library
Length 400
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCCAGTAGCACTAAAAGCAATCATCTAATGCTGCACTTAGCGTCTTCAGTTCATAAGCAC
TCAAAAATAAACTTATGGCAACCTTCCCTTGGCCTTCCAGCCTCAAAAAGGTGGCCATTT
TCTGAAATCACAGGAACTTTGTGGGTTTCCTGTTGTAGTCCACGTCATGTTTGTGCTGTT
CTACAACAATGCTCTTATAGACGACGATGGGAACGAGAATGCCAAAGGTTAATATGAGGG
CGGCGTTGCGACGATCGAATTTAAAACACTGCTCCAGATTCTCTCGATTGGTAGCCCATT
GTTCGATGAACTTGTTCTTCTGCACTCCCATGCCCCCGCCCGCCATCGTCGCTTCAAGCA
CGAAACCAGTCTCTCTCTCGCTCACTTGTCTCTCCGTGCA
■■Homology search results ■■ -
sp_hit_id Q6L786
Definition sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor member D OS=Macaca fascicularis
Align length 50
Score (bit) 32.7
E-value 0.57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918351|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_E03.
(400 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor mem... 33 0.57
sp|A8AE29|NDPA_CITK8 Nucleoid-associated protein ndpA OS=Citroba... 31 1.7
sp|Q3Z021|NDPA_SHISS Nucleoid-associated protein ndpA OS=Shigell... 30 2.8
sp|Q0T2T5|NDPA_SHIF8 Nucleoid-associated protein ndpA OS=Shigell... 30 2.8
sp|Q32HY6|NDPA_SHIDS Nucleoid-associated protein ndpA OS=Shigell... 30 2.8
sp|Q31YZ3|NDPA_SHIBS Nucleoid-associated protein ndpA OS=Shigell... 30 2.8
sp|Q1R9N2|NDPA_ECOUT Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|P33920|NDPA_ECOLI Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|B1IY83|NDPA_ECOLC Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|Q8FFR9|NDPA_ECOL6 Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|Q0TFQ3|NDPA_ECOL5 Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|A1AD43|NDPA_ECOK1 Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|A8A249|NDPA_ECOHS Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|Q8XE68|NDPA_ECO57 Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|A7ZP10|NDPA_ECO24 Nucleoid-associated protein ndpA OS=Escheri... 30 2.8
sp|Q83KD8|NDPA_SHIFL Nucleoid-associated protein ndpA OS=Shigell... 30 3.7
sp|Q8TDS7|MRGRD_HUMAN Mas-related G-protein coupled receptor mem... 30 4.9
sp|A1RTI3|IDI2_PYRIL Isopentenyl-diphosphate delta-isomerase OS=... 29 6.3

>sp|Q6L786|MRGRD_MACFA Mas-related G-protein coupled receptor member
D OS=Macaca fascicularis GN=MRGPRD PE=2 SV=1
Length = 320

Score = 32.7 bits (73), Expect = 0.57
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1

Query: 280 NLEQCFKFDRRNAALILTFGILVPIVVYKSIV--VEQHKHDVDYNRKPTK 137
N +QCF+ D AALI+ G+L P++ S+ V + + R+PT+
Sbjct: 171 NKDQCFRVDMVQAALIM--GVLTPVMTLSSLTLFVRVRRSSQQWRRQPTR 218


>sp|A8AE29|NDPA_CITK8 Nucleoid-associated protein ndpA
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83
/ SGSC4696) GN=ndpA PE=3 SV=1
Length = 335

Score = 31.2 bits (69), Expect = 1.7
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTTTVVDMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q3Z021|NDPA_SHISS Nucleoid-associated protein ndpA OS=Shigella
sonnei (strain Ss046) GN=ndpA PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q0T2T5|NDPA_SHIF8 Nucleoid-associated protein ndpA OS=Shigella
flexneri serotype 5b (strain 8401) GN=ndpA PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q32HY6|NDPA_SHIDS Nucleoid-associated protein ndpA OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=ndpA PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q31YZ3|NDPA_SHIBS Nucleoid-associated protein ndpA OS=Shigella
boydii serotype 4 (strain Sb227) GN=ndpA PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q1R9N2|NDPA_ECOUT Nucleoid-associated protein ndpA
OS=Escherichia coli (strain UTI89 / UPEC) GN=ndpA PE=3
SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|P33920|NDPA_ECOLI Nucleoid-associated protein ndpA
OS=Escherichia coli (strain K12) GN=ndpA PE=1 SV=3
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|B1IY83|NDPA_ECOLC Nucleoid-associated protein ndpA
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=ndpA PE=3 SV=1
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


>sp|Q8FFR9|NDPA_ECOL6 Nucleoid-associated protein ndpA
OS=Escherichia coli O6 GN=ndpA PE=3 SV=3
Length = 335

Score = 30.4 bits (67), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1

Query: 289 NRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVDYNRKPTKFL*FQKMAT 110
N+ L Q K D +N L+L +L P +V E H+ N+ F ++A
Sbjct: 6 NQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQ 65

Query: 109 FLRLEGQGK 83
LRL+ QG+
Sbjct: 66 TLRLQRQGE 74


tr_hit_id Q9SIQ8
Definition tr|Q9SIQ8|Q9SIQ8_ARATH Expressed protein (At2g31490) (Putative uncharacterized protein At2g31490) OS=Arabidopsis thaliana
Align length 70
Score (bit) 79.7
E-value 7.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918351|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_E03.
(400 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SIQ8|Q9SIQ8_ARATH Expressed protein (At2g31490) (Putative u... 80 7e-14
tr|Q8LFX2|Q8LFX2_ARATH Putative uncharacterized protein OS=Arabi... 79 9e-14
tr|A9SZZ3|A9SZZ3_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13
tr|A9P0L8|A9P0L8_PICSI Putative uncharacterized protein OS=Picea... 79 1e-13
tr|Q94EA1|Q94EA1_ORYSJ Putative uncharacterized protein P0435H01... 78 2e-13
tr|A9PI36|A9PI36_POPTR Putative uncharacterized protein OS=Popul... 77 4e-13
tr|A7Q6V4|A7Q6V4_VITVI Chromosome chr12 scaffold_57, whole genom... 77 6e-13
tr|Q5JN54|Q5JN54_ORYSJ Putative uncharacterized protein P0046E05... 75 1e-12
tr|B8A9G1|B8A9G1_ORYSI Putative uncharacterized protein OS=Oryza... 75 1e-12
tr|A9U005|A9U005_PHYPA Predicted protein OS=Physcomitrella paten... 75 2e-12
tr|B4FJW3|B4FJW3_MAIZE Putative uncharacterized protein OS=Zea m... 74 3e-12
tr|B6TW91|B6TW91_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11
tr|A2ZXV5|A2ZXV5_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10
tr|A5BM83|A5BM83_VITVI Putative uncharacterized protein (Fragmen... 66 1e-09
tr|Q0JJL1|Q0JJL1_ORYSJ Os01g0732100 protein (Putative uncharacte... 65 1e-09
tr|B8A917|B8A917_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|A4RUF3|A4RUF3_OSTLU Predicted protein OS=Ostreococcus lucimar... 47 4e-04
tr|B3GAM5|B3GAM5_9VIRU AMDV4_4 OS=uncultured virus PE=4 SV=1 34 4.1
tr|Q55IW0|Q55IW0_CRYNE Putative uncharacterized protein OS=Crypt... 34 4.1
tr|B7P761|B7P761_IXOSC Low-density lipoprotein receptor, putativ... 33 7.0

>tr|Q9SIQ8|Q9SIQ8_ARATH Expressed protein (At2g31490) (Putative
uncharacterized protein At2g31490) OS=Arabidopsis
thaliana GN=At2g31490 PE=2 SV=1
Length = 71

Score = 79.7 bits (195), Expect = 7e-14
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM KNKFIE W + RENLE F++ RRN ALI FGI +PI+VYK IV + H D
Sbjct: 2 GGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R KFL
Sbjct: 62 DAGRPHRKFL 71


>tr|Q8LFX2|Q8LFX2_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=4 SV=1
Length = 71

Score = 79.3 bits (194), Expect = 9e-14
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM KNKFIE W + RENLE F++ RRN ALI FGI +PI+VYK IV + H D
Sbjct: 2 GGGMETNKNKFIEYWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R KFL
Sbjct: 62 DAGRPHRKFL 71


>tr|A9SZZ3|A9SZZ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_59086 PE=4 SV=1
Length = 77

Score = 78.6 bits (192), Expect = 1e-13
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = -1

Query: 337 GGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVD 158
GGMGV KNK IE W T RENLE+ F+F RRN + L FGI VP + Y+ + E H D+
Sbjct: 3 GGMGVVKNKHIEDWGTARENLEKAFRFTRRNITIALVFGIAVPFLTYQGVTGEFHNQDMA 62

Query: 157 YNRKPTKFL 131
+ P KFL
Sbjct: 63 AEKPPRKFL 71


>tr|A9P0L8|A9P0L8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 72

Score = 78.6 bits (192), Expect = 1e-13
Identities = 38/69 (55%), Positives = 46/69 (66%)
Frame = -1

Query: 337 GGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVD 158
GGM V KNK+IE W T RENLE+ F++ RRN AL FG+LVP +VYK V + H D D
Sbjct: 3 GGMEVNKNKYIEDWGTARENLEKNFRWTRRNLALCGIFGLLVPYLVYKGTVKDFHMQDED 62

Query: 157 YNRKPTKFL 131
R P KF+
Sbjct: 63 AGRPPRKFI 71


>tr|Q94EA1|Q94EA1_ORYSJ Putative uncharacterized protein P0435H01.41
(Putative uncharacterized protein OSJNBb0036G09.4)
OS=Oryza sativa subsp. japonica GN=P0435H01.41 PE=4 SV=1
Length = 71

Score = 78.2 bits (191), Expect = 2e-13
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM V KN++IE+W RENLE F++ RR+ A++ FG+ VPI+VYK IV E H D
Sbjct: 2 GGGMEVHKNRWIEEWNAGRENLEFNFRWTRRSLAVVGLFGLAVPILVYKGIVREFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R P KFL
Sbjct: 62 DAGRPPRKFL 71


>tr|A9PI36|A9PI36_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 71

Score = 77.0 bits (188), Expect = 4e-13
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM KNKFIE W + RE LEQ F++ RRN ALI FGI VPI+VYK IV E + D
Sbjct: 2 GGGMEANKNKFIEDWGSARETLEQNFRWTRRNFALIGLFGIAVPILVYKGIVKEFNMQDE 61

Query: 160 DYNRKPTKFL 131
D R KF+
Sbjct: 62 DAGRPYRKFM 71


>tr|A7Q6V4|A7Q6V4_VITVI Chromosome chr12 scaffold_57, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031552001
PE=4 SV=1
Length = 71

Score = 76.6 bits (187), Expect = 6e-13
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM KNKFIE+W RENLE F++ RRN L FG+ VPI+VY+ IV E H D
Sbjct: 2 GGGMEAHKNKFIEEWGAARENLEYNFRWTRRNLVLAGIFGVAVPILVYRGIVKEFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R KFL
Sbjct: 62 DAGRPHRKFL 71


>tr|Q5JN54|Q5JN54_ORYSJ Putative uncharacterized protein
P0046E05.18-1 (Os01g0750800 protein) OS=Oryza sativa
subsp. japonica GN=P0046E05.18-1 PE=4 SV=1
Length = 71

Score = 75.5 bits (184), Expect = 1e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM V KNK+IE+W RENLE F++ RR+ A++ FG+ VPI+VYK IV E H D
Sbjct: 2 GGGMEVHKNKWIEEWNAGRENLEFNFRWTRRSLAVVGLFGLAVPILVYKGIVREFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R KFL
Sbjct: 62 DAGRPYRKFL 71


>tr|B8A9G1|B8A9G1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03747 PE=4 SV=1
Length = 71

Score = 75.5 bits (184), Expect = 1e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = -1

Query: 340 GGGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDV 161
GGGM V KNK+IE+W RENLE F++ RR+ A++ FG+ VPI+VYK IV E H D
Sbjct: 2 GGGMEVHKNKWIEEWNAGRENLEFNFRWTRRSLAVVGLFGLAVPILVYKGIVREFHMQDE 61

Query: 160 DYNRKPTKFL 131
D R KFL
Sbjct: 62 DAGRPYRKFL 71


>tr|A9U005|A9U005_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110617 PE=4 SV=1
Length = 74

Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = -1

Query: 337 GGMGVQKNKFIEQWATNRENLEQCFKFDRRNAALILTFGILVPIVVYKSIVVEQHKHDVD 158
GGM V KNK IE W T RENLE+ F+F RRN A+ L FG+ VP + Y+ I E HK D+
Sbjct: 3 GGMDVVKNKHIEDWGTARENLEKTFRFTRRNIAVALIFGVAVPFLTYQGITGEFHKQDIA 62

Query: 157 YNRKPTKFL 131
+ KFL
Sbjct: 63 AGQPRRKFL 71