BP918354 |
Clone id |
YMU001_000112_E06 |
Library |
YMU01 |
Length |
501 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_E06. |
Accession |
BP918354 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCACAGGTTGAATGCCCGCATGAAGAGAAAGCAAGTTTCAATGCTAGAAAGTTTCAGTCT CTTGTCAGAACATGTAAAAGAGCTTTGTAAGGCTTTGAATATTGTTGCTTCCTTTCAGAA AGGGAATGCTTTAACAGCGGGGTACGATTTCGATCGCACTTTATTGTTGTGTGCCGGAAA CTTTGCCAGCACCCCAGAGTGGGCAAGTGCTTTAACCAATATAAGGACTTGGATGTACGG TATGTACCTCGCATTGAATGCTGAGCAATGCTCGTGCGATTTTATCAATTATGCCAAGCT CATAAGTGAGATCAAGAGGAGTGCTTGTGATAAAACTATTTTTGAAGATCCATCAAAGTT TTTGGCGTCTGTCTGTTCGCAACACGAAATGATGGAGCGTCTTCTATCTCAGGTAGAAGA AAACAGCAATTGCTGTGCAAAACTCTCTGAGGGGCAGGAACTTGCCTTAAGCGCTCTAGT GGATGCCTCTCTGCATCAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XIP4 |
Definition |
sp|Q5XIP4|UBQLN_RAT Ubiquilin-like protein OS=Rattus norvegicus |
Align length |
50 |
Score (bit) |
33.9 |
E-value |
0.43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5IDS8 |
Definition |
tr|A5IDS8|A5IDS8_LEGPC Calmodulin-dependent protein kinase OS=Legionella pneumophila (strain Corby) |
Align length |
134 |
Score (bit) |
35.4 |
E-value |
1.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918354|Adiantum capillus-veneris mRNA, clone: YMU001_000112_E06. (501 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5IDS8|A5IDS8_LEGPC Calmodulin-dependent protein kinase OS=Le... 35 1.5 tr|Q4S0P1|Q4S0P1_TETNG Chromosome 2 SCAF14781, whole genome shot... 34 3.3 tr|Q5X3G0|Q5X3G0_LEGPA Putative uncharacterized protein OS=Legio... 33 5.7 tr|Q5F720|Q5F720_NEIG1 Putative exodeoxyribonuclease V OS=Neisse... 33 7.4 tr|B4RN93|B4RN93_NEIG2 Putative exodeoxyribonuclease V OS=Neisse... 33 7.4 tr|B5JNT0|B5JNT0_9BACT SNF2 family N-terminal domain protein OS=... 33 7.4 tr|B5VNK8|B5VNK8_YEAS6 YLR308Wp-like protein OS=Saccharomyces ce... 33 7.4 tr|B3RHI7|B3RHI7_YEAS1 Chitin deacetylase OS=Saccharomyces cerev... 33 7.4 tr|A7A1J3|A7A1J3_YEAS7 Chitin deacetylase OS=Saccharomyces cerev... 33 7.4 tr|Q4SA66|Q4SA66_TETNG Chromosome 12 SCAF14692, whole genome sho... 33 7.6 tr|Q1DXD4|Q1DXD4_COCIM Predicted protein OS=Coccidioides immitis... 33 7.6 tr|A9M1U0|A9M1U0_NEIM0 Exodeoxyribonuclease V gamma subunit OS=N... 33 9.7 tr|A1KVC5|A1KVC5_NEIMF Exodeoxyribonuclease V OS=Neisseria menin... 33 9.7 tr|A1ITH1|A1ITH1_NEIMA Exodeoxyribonuclease V OS=Neisseria menin... 33 9.7
>tr|A5IDS8|A5IDS8_LEGPC Calmodulin-dependent protein kinase OS=Legionella pneumophila (strain Corby) GN=LPC_1586 PE=4 SV=1 Length = 542
Score = 35.4 bits (80), Expect = 1.5 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 7/134 (5%) Frame = +2
Query: 26 RKQVSMLESFSL--LSEHVKELCKALNIVASFQKGNALTAGYDF---DRTLLLCAGNFAS 190 ++ + +++ +SL S+++ +C ALN+ A YDF L + +S Sbjct: 358 KESLPLVDQYSLKVFSDYLDNICSALNLNNDKTNEKLARAAYDFLTAQINKLFEDNSKSS 417
Query: 191 TPEWASALTNIRTWM--YGMYLALNAEQCSCDFINYAKLISEIKRSACDKTIFEDPSKFL 364 P + S +++ ++ YL N CS ++ KL+ ++ D +P + L Sbjct: 418 QPSFESFSEDVQCFLNHINTYLINNPTACSNSIVSTIKLLKQL-----DNKRSFNPEQSL 472
Query: 365 ASVCSQHEMMERLL 406 + C E+M +LL Sbjct: 473 KNFCGYKEIMIQLL 486
>tr|Q4S0P1|Q4S0P1_TETNG Chromosome 2 SCAF14781, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00025937001 PE=4 SV=1 Length = 1313
Score = 34.3 bits (77), Expect = 3.3 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2
Query: 308 EIKRSACDKTIFEDPSKFLASVC-SQHEMMERLLSQVEENSNCCAKLSEGQELALSAL 478 +I+ +CD+ + D S LA +C + E+ + + + ++E + CCA + G + L+ L Sbjct: 682 DIEALSCDELLM-DTSALLAELCVNPEELAKAIRADIKEKTGCCASVGMGSNILLARL 738
>tr|Q5X3G0|Q5X3G0_LEGPA Putative uncharacterized protein OS=Legionella pneumophila (strain Paris) GN=lpp2076 PE=4 SV=1 Length = 542
Score = 33.5 bits (75), Expect = 5.7 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Frame = +2
Query: 59 LLSEHVKELCKALNIVASFQKGNALTAGYDF---DRTLLLCAGNFASTPEWASALTNIRT 229 + S+++ +C ALN+ A YDF L + +S P + S +++ Sbjct: 371 VFSDYLDNICSALNLNNDKTNEKLARAAYDFLTAQINKLFEDNSKSSQPSFESFSEDVQC 430
Query: 230 WM--YGMYLALNAEQCSCDFINYAKLISEIKRSACDKTIFEDPSKFLASVCSQHEMMERL 403 ++ YL N CS ++ KL+ ++ D +P + L + C E+M +L Sbjct: 431 FLNHINTYLINNPTACSNSIVSTIKLLKQL-----DNKRSFNPEQSLKNFCGYKEIMIQL 485
Query: 404 L 406 L Sbjct: 486 L 486
>tr|Q5F720|Q5F720_NEIG1 Putative exodeoxyribonuclease V OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=NGO1369 PE=4 SV=1 Length = 1068
Score = 33.1 bits (74), Expect = 7.4 Identities = 20/83 (24%), Positives = 38/83 (45%) Frame = +2
Query: 149 FDRTLLLCAGNFASTPEWASALTNIRTWMYGMYLALNAEQCSCDFINYAKLISEIKRSAC 328 F +T L A FA +W +AL +T YG ++ + D+ A + ++ Sbjct: 985 FAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQK----DYTEVALVFGNASQNPL 1040
Query: 329 DKTIFEDPSKFLASVCSQHEMME 397 ++ +FE+ ++ LA + E E Sbjct: 1041 EQPLFENLARLLADTLAAAEKRE 1063
>tr|B4RN93|B4RN93_NEIG2 Putative exodeoxyribonuclease V OS=Neisseria gonorrhoeae (strain NCCP11945) GN=NGK_1603 PE=4 SV=1 Length = 1069
Score = 33.1 bits (74), Expect = 7.4 Identities = 20/83 (24%), Positives = 38/83 (45%) Frame = +2
Query: 149 FDRTLLLCAGNFASTPEWASALTNIRTWMYGMYLALNAEQCSCDFINYAKLISEIKRSAC 328 F +T L A FA +W +AL +T YG ++ + D+ A + ++ Sbjct: 986 FAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQK----DYTEVALVFGNASQNPL 1041
Query: 329 DKTIFEDPSKFLASVCSQHEMME 397 ++ +FE+ ++ LA + E E Sbjct: 1042 EQPLFENLARLLADTLAAAEKRE 1064
>tr|B5JNT0|B5JNT0_9BACT SNF2 family N-terminal domain protein OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_3002 PE=4 SV=1 Length = 831
Score = 33.1 bits (74), Expect = 7.4 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 4/110 (3%) Frame = +2
Query: 155 RTLLLCAGNFASTPEWASALTNIRTWM----YGMYLALNAEQCSCDFINYAKLISEIKRS 322 RTL++C + P W S M YG LA AE+ I+YA L + I++ Sbjct: 422 RTLVVCPASVV--PVWISEFAKFAPGMTIGRYGRKLARGAEEPDVLVISYALLRNRIEKI 479
Query: 323 ACDKTIFEDPSKFLASVCSQHEMMERLLSQVEENSNCCAKLSEGQELALS 472 AC+ +F +V + + ++ S+V S C ++ + +AL+ Sbjct: 480 ACE--------EFEYAVIDEAQFIKNPKSKV---SRSCRRIKAKRRIALT 518
>tr|B5VNK8|B5VNK8_YEAS6 YLR308Wp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AWRI1631_123400 PE=4 SV=1 Length = 312
Score = 33.1 bits (74), Expect = 7.4 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 6/123 (4%) Frame = +2
Query: 146 DFDRTLLLCAGNFASTPEWASALTNIRTWMYGMYLALNAEQCSCDFINYAKL--ISEIKR 319 DF +L A P+W SA T ++ W L+ DFI+++++ E + Sbjct: 36 DFQFPVLERAATKTPFPDWLSAFTGLKEWP-----GLDPPYIPLDFIDFSQIPDYKEYDQ 90
Query: 320 SACDKTIFEDPSKFLASVCSQHEMMERLLSQVEENSNCCAKLS----EGQELALSALVDA 487 + CD ++ D F C++H ++ C+KLS +G + + L+D Sbjct: 91 NHCD-SVPRDSCSFDCHHCTEH-----------DDVYTCSKLSQTFDDGPSASTTKLLDR 138
Query: 488 SLH 496 H Sbjct: 139 LKH 141
>tr|B3RHI7|B3RHI7_YEAS1 Chitin deacetylase OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_04257 PE=4 SV=1 Length = 312
Score = 33.1 bits (74), Expect = 7.4 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 6/123 (4%) Frame = +2
Query: 146 DFDRTLLLCAGNFASTPEWASALTNIRTWMYGMYLALNAEQCSCDFINYAKL--ISEIKR 319 DF +L A P+W SA T ++ W L+ DFI+++++ E + Sbjct: 36 DFQFPVLERAATKTPFPDWLSAFTGLKEWP-----GLDPPYIPLDFIDFSQIPDYKEYDQ 90
Query: 320 SACDKTIFEDPSKFLASVCSQHEMMERLLSQVEENSNCCAKLS----EGQELALSALVDA 487 + CD ++ D F C++H ++ C+KLS +G + + L+D Sbjct: 91 NHCD-SVPRDSCSFDCHHCTEH-----------DDVYTCSKLSQTFDDGPSASTTKLLDR 138
Query: 488 SLH 496 H Sbjct: 139 LKH 141
>tr|A7A1J3|A7A1J3_YEAS7 Chitin deacetylase OS=Saccharomyces cerevisiae (strain YJM789) GN=CDA2 PE=4 SV=1 Length = 312
Score = 33.1 bits (74), Expect = 7.4 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 6/123 (4%) Frame = +2
Query: 146 DFDRTLLLCAGNFASTPEWASALTNIRTWMYGMYLALNAEQCSCDFINYAKL--ISEIKR 319 DF +L A P+W SA T ++ W L+ DFI+++++ E + Sbjct: 36 DFQFPVLERAATKTPFPDWLSAFTGLKEWP-----GLDPPYIPLDFIDFSQIPDYKEYDQ 90
Query: 320 SACDKTIFEDPSKFLASVCSQHEMMERLLSQVEENSNCCAKLS----EGQELALSALVDA 487 + CD ++ D F C++H ++ C+KLS +G + + L+D Sbjct: 91 NHCD-SVPRDSCSFDCHHCTEH-----------DDVYTCSKLSQTFDDGPSASTTKLLDR 138
Query: 488 SLH 496 H Sbjct: 139 LKH 141
>tr|Q4SA66|Q4SA66_TETNG Chromosome 12 SCAF14692, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00021590001 PE=4 SV=1 Length = 222
Score = 33.1 bits (74), Expect = 7.6 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +1
Query: 58 SLVRTCKRAL*GFEYCCFLS-ERECFNSGVRFRSHFIVVC 174 ++V TC+ +YCCFL ++CF ++ HF+V+C Sbjct: 135 AVVLTCELCASPVKYCCFLPVGQKCFCRKPEYQGHFVVLC 174
|