BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918360|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_F01.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q44315|TREY_ARTSQ Maltooligosyl trehalose synthase OS=Arthrob...    32   1.7  
sp|P11979|KPYM_FELCA Pyruvate kinase isozyme M1 OS=Felis silvest...    32   2.2  
sp|P29533|VCAM1_MOUSE Vascular cell adhesion protein 1 OS=Mus mu...    31   2.9  
sp|Q28260|VCAM1_CANFA Vascular cell adhesion protein 1 OS=Canis ...    31   3.8  
sp|P19320|VCAM1_HUMAN Vascular cell adhesion protein 1 OS=Homo s...    30   8.4  
sp|Q81495|POLG_HCVK3 Genome polyprotein OS=Hepatitis C virus gen...    30   8.4  

>sp|Q44315|TREY_ARTSQ Maltooligosyl trehalose synthase
           OS=Arthrobacter sp. (strain Q36) GN=treY PE=1 SV=1
          Length = 775

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -1

Query: 434 KMEITEVSVRLERVTGKGRKEICTGETEMMRGGETSVDLLAEMAGFQVGPNMQTLEKRMM 255
           K+ +T  ++RL R     R E+ TG   ++  G  +  LLA   G    P   TL  R+ 
Sbjct: 664 KLLVTSRALRLRR----DRPELFTGYRPVLASGPAAGHLLAFDRGTAAAPGALTLATRLP 719

Query: 254 ILLQEGGGRHD 222
             L++ GG  D
Sbjct: 720 YGLEQSGGWRD 730


>sp|P11979|KPYM_FELCA Pyruvate kinase isozyme M1 OS=Felis silvestris
           catus GN=PKM2 PE=1 SV=2
          Length = 531

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = -1

Query: 353 EMMRGGETSVDLLAEMAGFQVGPNMQTLEKRMMILLQEGGGRHDLMHWSW*ECRLYLGKD 174
           E++RG   S DL+  MA   V  + + L   +++L + G   H +  +      + + ++
Sbjct: 397 ELVRGSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRN 456

Query: 173 YTAFGHLHLTIYEPDFKVDCKDLV 102
           +      HL  Y   F V CKD V
Sbjct: 457 HQTARQAHL--YRGIFPVVCKDPV 478


>sp|P29533|VCAM1_MOUSE Vascular cell adhesion protein 1 OS=Mus
           musculus GN=Vcam1 PE=1 SV=1
          Length = 739

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +1

Query: 313 ARRSTEVSPPLIISVSPVQISFLPFPVTLSKRTDTSVISIFCKRTCVPYIIL 468
           +R+S E    LII VSP  I    FP    K  DT +IS  C      +IIL
Sbjct: 588 SRKSVE----LIIQVSPKDIQLTVFPSKSVKEGDTVIISCTCGNVPETWIIL 635


>sp|Q28260|VCAM1_CANFA Vascular cell adhesion protein 1 OS=Canis
           familiaris GN=VCAM1 PE=2 SV=1
          Length = 739

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 343 LIISVSPVQISFLPFPVTLSKRTDTSVISIFCKRTCVPYIIL 468
           LII V+P  I  + FP    K  DT +IS  C      +IIL
Sbjct: 594 LIIQVAPKDIQLIAFPSESVKEGDTVIISCTCGNVPKTWIIL 635


>sp|P19320|VCAM1_HUMAN Vascular cell adhesion protein 1 OS=Homo
           sapiens GN=VCAM1 PE=1 SV=1
          Length = 739

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 343 LIISVSPVQISFLPFPVTLSKRTDTSVISIFCKRTCVPYIIL 468
           LII V+P  I    FP    K  DT +IS  C      +IIL
Sbjct: 594 LIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPETWIIL 635


>sp|Q81495|POLG_HCVK3 Genome polyprotein OS=Hepatitis C virus genotype
            3a (isolate k3a) PE=3 SV=3
          Length = 3021

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +1

Query: 193  LHSYQLQ-CMRS*RPPPSWSNIIIRFSSVCMFGPTWKPAISARRSTEVSPPLIISVSPVQ 369
            L +YQ   C R+  PPPSW               TWK  +  + +     PL+  + PVQ
Sbjct: 1592 LTAYQATVCARAQAPPPSWDE-------------TWKCLVRLKPTLHGPTPLLYRLGPVQ 1638

Query: 370  ISF-LPFPVT 396
                L  P+T
Sbjct: 1639 NEICLTHPIT 1648

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918360|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_F01.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******