BP918368
Clone id YMU001_000112_F10
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTACAGAATTATAAGGCCACAGCATTCCACTCGGTGAAATTGACATGCAAAGCACTACC
TACCTACATTGCACCTGTGGCCTCTTTGGCTGCCAGGTACATGTGGCAATTTCCAAATCA
CTTCCATAAATTTGGATCGCTCAACTATACACTGCTGTTATCTGTATTTTTGCCAGTCCT
TGTCAATACCTCCAAAATTGCCTTAGTGGTATTGGGTACCTTTCCAAACAAGCAAAAGGC
TTGAGCCACCCCCAGAAATAGGCAGCACAAACGGTAGCACATGAATGATCAATATTACAT
GATCAACCTCCAAAGTCACTCCACACAACACCAAGAAAAACTTTCCACCAACAAAGCTCA
AAGCACATTACTACAAAAACAAAGCCCAATTCCCTTCAAATTTGATGAACACCGCAAAAA
ACTTTCCACCAGAAATACAATGAAAGAAAAGGTGGAAGAGATGGAAGCATTACAGCACTT
ACATTCAGAGTCGGGCATATCCAAGCCTCTTCAAAAACCTTCTTACGGGAACTTTACGCT
CATATACACTAACATTGCC
■■Homology search results ■■ -
sp_hit_id P53599
Definition sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomyces cerevisiae
Align length 74
Score (bit) 31.6
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918368|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_F10.
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomy... 32 2.8
sp|Q4P6I3|CWC25_USTMA Pre-mRNA-splicing factor CWC25 OS=Ustilago... 32 2.8
sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS... 31 3.6
sp|Q54X49|METE_DICDI 5-methyltetrahydropteroyltriglutamate--homo... 31 3.6
sp|O35028|YFKR_BACSU Putative spore germination protein yfkR OS=... 31 4.7
sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculu... 31 4.7
sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit al... 31 4.7
sp|Q88WR8|OXAA2_LACPL Membrane protein oxaA 2 OS=Lactobacillus p... 30 6.2
sp|Q81JV2|UVSE_BACAN UV DNA damage endonuclease OS=Bacillus anth... 30 8.1
sp|Q60665|SKIL_MOUSE Ski-like protein OS=Mus musculus GN=Skil PE... 30 8.1
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae ... 30 8.1

>sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomyces
cerevisiae GN=SSK2 PE=1 SV=1
Length = 1579

Score = 31.6 bits (70), Expect = 2.8
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1

Query: 316 SLHTTPRKTFHQQSSKHITTKTKPNSLQI**TPQKTFHQKYNERK-GGRDGSITALTFRV 492
S+ +TP+ +Q S+KHI T+++PN T Q ++R G GS T+L
Sbjct: 190 SIMSTPQNITNQTSNKHIPTRSQPNGSTSSSTLQDIVTTNSSQRSVGHHGGSTTSLRTYK 249

Query: 493 GHIQASSKTFLREL 534
+ + +LR++
Sbjct: 250 KQYVLNEQLYLRKM 263


>sp|Q4P6I3|CWC25_USTMA Pre-mRNA-splicing factor CWC25 OS=Ustilago
maydis GN=CWC25 PE=3 SV=1
Length = 520

Score = 31.6 bits (70), Expect = 2.8
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2

Query: 341 LSTNKAQSTLLQKQSPIPFKFD----EHRKKLSTRNTMKEKVEEMEALQHLHSESGISKP 508
L+T K+ LLQ +K + E RKKL +E+ EM+ LQ L E+G K
Sbjct: 98 LNTKKSWHPLLQVNQERVWKREKEALEERKKLEELRREREQEREMQQLQRLQEEAGGKKR 157

Query: 509 LQK 517
+ +
Sbjct: 158 IDR 160


>sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment)
OS=Mytilus edulis GN=FP1 PE=1 SV=1
Length = 875

Score = 31.2 bits (69), Expect = 3.6
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3

Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRWKRWKHY-STYIQSRAY 500
+ K ++PPT YK K +PS ++PP + K +K Y TY +Y
Sbjct: 191 YKAKPSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPTYKAKPTYKAKPSYPPTYKAKPSY 249

Query: 501 PSLFK 515
P +K
Sbjct: 250 PPTYK 254



Score = 31.2 bits (69), Expect = 3.6
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3

Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRW-KRWKHYSTYIQSRAY 500
+ K ++PPT YK K +PS ++PP + K + +K TY Y
Sbjct: 403 YKAKPSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPSYKAKPSYPPTYKAKPTYKAKPTY 461

Query: 501 PSLFK 515
PS +K
Sbjct: 462 PSTYK 466


>sp|Q54X49|METE_DICDI
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Dictyostelium discoideum GN=metE
PE=3 SV=1
Length = 825

Score = 31.2 bits (69), Expect = 3.6
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Frame = +2

Query: 290 QYYMINLQSHSTQHQEKLSTN--------KAQSTLLQKQSPIPFKFDEHRKKLST 430
+YY +N +S+ + + KL N + ++L++++P P + + RK+L+T
Sbjct: 434 EYYQLNKESNQKRRESKLIHNDIVKKRVTEITPSMLKRENPFPVRREAQRKRLTT 488


>sp|O35028|YFKR_BACSU Putative spore germination protein yfkR
OS=Bacillus subtilis GN=yfkR PE=3 SV=1
Length = 384

Score = 30.8 bits (68), Expect = 4.7
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2

Query: 284 NDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEM 463
NDQYY+I + T ++ +ST L K P F+ R +T+N +K++ EE+
Sbjct: 301 NDQYYIIQKALNRTIKKDVISTVHRLQKL--KADPAGFQDRTIRSTATTKNLLKKEWEEV 358

Query: 464 EALQHLH 484
+H
Sbjct: 359 YKDMEVH 365


>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus
GN=Kif21a PE=1 SV=2
Length = 1672

Score = 30.8 bits (68), Expect = 4.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2

Query: 338 KLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEALQHLHSESGISKPLQK 517
K+ + QS+L +K+ P P TR EK ++ +A +H HS+SG S+
Sbjct: 1222 KIGSISRQSSLSEKKVPEPSPV--------TRRKAYEKADKPKAKEHKHSDSGASETSLS 1273

Query: 518 P 520
P
Sbjct: 1274 P 1274


>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit
alpha-4 OS=Gallus gallus GN=CHRNA4 PE=1 SV=1
Length = 622

Score = 30.8 bits (68), Expect = 4.7
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1

Query: 241 LSHPQK*AAQTVAHE*SILHDQPPKSLHTTPRKTFHQQSSKHITTKTKPNSLQI 402
L P K ++ + + S+LH +PP+ ++P+ + H S T+ +K SL +
Sbjct: 412 LEEPAKPMCKSPSGQYSMLHPEPPQVTCSSPKPSCHPLSDTQTTSISKGRSLSV 465


>sp|Q88WR8|OXAA2_LACPL Membrane protein oxaA 2 OS=Lactobacillus
plantarum GN=oxaA2 PE=3 SV=1
Length = 307

Score = 30.4 bits (67), Expect = 6.2
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2

Query: 299 MINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEALQH 478
MIN Q ST QEK+S + Q +Q R+K +T T +EK L
Sbjct: 78 MINQQRKSTYQQEKMSAVRPQMEKIQA-----------RQKAAT--TQEEKAAISNELMQ 124

Query: 479 LHSESGIS 502
L+ ++GIS
Sbjct: 125 LYRDNGIS 132


>sp|Q81JV2|UVSE_BACAN UV DNA damage endonuclease OS=Bacillus
anthracis GN=uvsE PE=3 SV=2
Length = 317

Score = 30.0 bits (66), Expect = 8.1
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = +2

Query: 179 LVNTSKIALVVLGTFPNKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKA 358
+ ++S I + V G + NK+KA +R H N + +++ T + + A
Sbjct: 144 IADSSYINIHVGGAYGNKEKA--------IERFHENIKKLPAHIKKQMTLENDDKTCTTA 195

Query: 359 QSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEM 463
++ + ++ IPF FD H N +E +EE+
Sbjct: 196 ETLSICQKEKIPFVFDYHH---HMANLCEEPLEEL 227


>sp|Q60665|SKIL_MOUSE Ski-like protein OS=Mus musculus GN=Skil PE=2
SV=2
Length = 675

Score = 30.0 bits (66), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2

Query: 278 HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVE 457
+M D+ N+ S Q K +T S KQS P + +H+K +S + E+ E
Sbjct: 400 YMCDKVVAPNVSLTSAASQSKEATKAETSKSTSKQSEKPHESSQHQKTVSYPDVSLEEQE 459

Query: 458 EME 466
+M+
Sbjct: 460 KMD 462


tr_hit_id A0BXV4
Definition tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 74
Score (bit) 35.8
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918368|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_F10.
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, who... 36 1.6
tr|Q1XBU0|Q1XBU0_MYTED Foot protein 1 OS=Mytilus edulis GN=fp-1 ... 35 3.6
tr|Q83CE2|Q83CE2_COXBU Putative uncharacterized protein OS=Coxie... 35 3.6
tr|A9NDQ0|A9NDQ0_COXBR Putative uncharacterized protein OS=Coxie... 35 3.6
tr|A0C7C4|A0C7C4_PARTE Chromosome undetermined scaffold_155, who... 35 3.6
tr|B6IZU6|B6IZU6_COXB2 Putative uncharacterized protein OS=Coxie... 34 4.7
tr|A9KFN6|A9KFN6_COXBN Putative uncharacterized protein OS=Coxie... 34 4.7
tr|B2A810|B2A810_NATTJ Peptide chain release factor 2 (BRF-2) OS... 34 6.2
tr|Q4XUR1|Q4XUR1_PLACH Putative uncharacterized protein (Fragmen... 34 6.2
tr|B4LXE7|B4LXE7_DROVI GJ22874 OS=Drosophila virilis GN=GJ22874 ... 34 6.2

>tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00033224001 PE=4 SV=1
Length = 1826

Score = 35.8 bits (81), Expect = 1.6
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2

Query: 278 HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVE 457
+ ND Y+ + +S +HQ K S N +S + + + KF E L T N EK +
Sbjct: 1125 NQNDNKYLFSSRSDENEHQNKQSVNTQESIM---KGSLHLKFPERNLALKTMNKFMEKRK 1181

Query: 458 EMEALQHLHSESGI 499
+ + S+ I
Sbjct: 1182 QQDFFNETDSKLAI 1195


>tr|Q1XBU0|Q1XBU0_MYTED Foot protein 1 OS=Mytilus edulis GN=fp-1
PE=2 SV=1
Length = 565

Score = 34.7 bits (78), Expect = 3.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3

Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRWKRWKHY-STYIQSRAY 500
+ K ++PPT YK K +PS ++PP + K +K Y STY Y
Sbjct: 321 YKAKSSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPTY 379

Query: 501 PSLFK 515
PS +K
Sbjct: 380 PSTYK 384


>tr|Q83CE2|Q83CE2_COXBU Putative uncharacterized protein OS=Coxiella
burnetii GN=CBU_1178 PE=4 SV=1
Length = 377

Score = 34.7 bits (78), Expect = 3.6
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2

Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469
+ Q QH EKL + K Q L + P F + ++ + ++M+EK E+ +
Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKSEISS 64

Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556
LQH S L KP++ F L Y +
Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93


>tr|A9NDQ0|A9NDQ0_COXBR Putative uncharacterized protein OS=Coxiella
burnetii (strain RSA 331 / Henzerling II)
GN=COXBURSA331_A1328 PE=4 SV=1
Length = 377

Score = 34.7 bits (78), Expect = 3.6
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2

Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469
+ Q QH EKL + K Q L + P F + ++ + ++M+EK E+ +
Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKSEISS 64

Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556
LQH S L KP++ F L Y +
Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93


>tr|A0C7C4|A0C7C4_PARTE Chromosome undetermined scaffold_155, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00035821001 PE=4 SV=1
Length = 440

Score = 34.7 bits (78), Expect = 3.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2

Query: 299 MINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNT 439
M+N +S Q Q +++T K QST QK+ P +F E ++ + T NT
Sbjct: 269 MMNYKSEPNQMQNQMATKKVQSTPQQKEQKSPNRF-EQQQVMQTENT 314


>tr|B6IZU6|B6IZU6_COXB2 Putative uncharacterized protein OS=Coxiella
burnetii (strain CbuG_Q212) GN=CbuG_0833 PE=4 SV=1
Length = 377

Score = 34.3 bits (77), Expect = 4.7
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2

Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469
+ Q QH EKL + K Q L + P F + ++ + ++M+EK E+ +
Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKPEISS 64

Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556
LQH S L KP++ F L Y +
Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93


>tr|A9KFN6|A9KFN6_COXBN Putative uncharacterized protein OS=Coxiella
burnetii (strain Dugway 5J108-111) GN=CBUD_1270 PE=4
SV=1
Length = 404

Score = 34.3 bits (77), Expect = 4.7
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2

Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469
+ Q QH EKL + K Q L + P F + ++ + ++M+EK E+ +
Sbjct: 32 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKPEISS 91

Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556
LQH S L KP++ F L Y +
Sbjct: 92 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 120


>tr|B2A810|B2A810_NATTJ Peptide chain release factor 2 (BRF-2)
OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
DSM 18059 / JW/NM-WN-LF) GN=Nther_2216 PE=4 SV=1
Length = 344

Score = 33.9 bits (76), Expect = 6.2
Identities = 18/94 (19%), Positives = 47/94 (50%)
Frame = +2

Query: 215 GTFPNKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIP 394
G + ++ +A + RQ + H+++ + L+ + E ++ T +++
Sbjct: 16 GFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEEDETDGTNMKEIKQAL 75

Query: 395 FKFDEHRKKLSTRNTMKEKVEEMEALQHLHSESG 496
F+F+E ++ +N +K++ +E A+ LH+ +G
Sbjct: 76 FQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAG 109


>tr|Q4XUR1|Q4XUR1_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC105986.00.0 PE=4 SV=1
Length = 373

Score = 33.9 bits (76), Expect = 6.2
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2

Query: 263 QHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTM 442
Q+K + ND INLQ HST+H + + K+ T K + I K+ +NT
Sbjct: 117 QNKNPNYNDNIN-INLQQHSTKHIDNVIKKKSMQTKRNKSNTIIGDHIIQPNKMEDKNTK 175

Query: 443 KE--KVEEMEA 469
KE K++E A
Sbjct: 176 KEVNKLKERNA 186


>tr|B4LXE7|B4LXE7_DROVI GJ22874 OS=Drosophila virilis GN=GJ22874
PE=4 SV=1
Length = 1013

Score = 33.9 bits (76), Expect = 6.2
Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2

Query: 227 NKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQ-KQSPIPFKF 403
N K + + +Q ++ H Q Q H QHQ++L + Q Q +Q +
Sbjct: 407 NSNKLASLQQQQQQQQQHFQQQQQQQQQQQHLQQHQKQLQQQQQQHQQKQLQQQQQQHQQ 466

Query: 404 DEHRKKLSTRNTMKEKVEEMEALQHLHSESGISKPLQKPSYGNFTLIY 547
+ +++ + +++ ++ + QH H + + Q+ + N Y
Sbjct: 467 QQQQQQQQLQQQQQQQQQQQQQAQHHHQQQQQQQQQQQQQFANINRNY 514