BP918368 |
Clone id |
YMU001_000112_F10 |
Library |
YMU01 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_F10. |
Accession |
BP918368 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTACAGAATTATAAGGCCACAGCATTCCACTCGGTGAAATTGACATGCAAAGCACTACC TACCTACATTGCACCTGTGGCCTCTTTGGCTGCCAGGTACATGTGGCAATTTCCAAATCA CTTCCATAAATTTGGATCGCTCAACTATACACTGCTGTTATCTGTATTTTTGCCAGTCCT TGTCAATACCTCCAAAATTGCCTTAGTGGTATTGGGTACCTTTCCAAACAAGCAAAAGGC TTGAGCCACCCCCAGAAATAGGCAGCACAAACGGTAGCACATGAATGATCAATATTACAT GATCAACCTCCAAAGTCACTCCACACAACACCAAGAAAAACTTTCCACCAACAAAGCTCA AAGCACATTACTACAAAAACAAAGCCCAATTCCCTTCAAATTTGATGAACACCGCAAAAA ACTTTCCACCAGAAATACAATGAAAGAAAAGGTGGAAGAGATGGAAGCATTACAGCACTT ACATTCAGAGTCGGGCATATCCAAGCCTCTTCAAAAACCTTCTTACGGGAACTTTACGCT CATATACACTAACATTGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P53599 |
Definition |
sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomyces cerevisiae |
Align length |
74 |
Score (bit) |
31.6 |
E-value |
2.8 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918368|Adiantum capillus-veneris mRNA, clone: YMU001_000112_F10. (559 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomy... 32 2.8 sp|Q4P6I3|CWC25_USTMA Pre-mRNA-splicing factor CWC25 OS=Ustilago... 32 2.8 sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS... 31 3.6 sp|Q54X49|METE_DICDI 5-methyltetrahydropteroyltriglutamate--homo... 31 3.6 sp|O35028|YFKR_BACSU Putative spore germination protein yfkR OS=... 31 4.7 sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculu... 31 4.7 sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit al... 31 4.7 sp|Q88WR8|OXAA2_LACPL Membrane protein oxaA 2 OS=Lactobacillus p... 30 6.2 sp|Q81JV2|UVSE_BACAN UV DNA damage endonuclease OS=Bacillus anth... 30 8.1 sp|Q60665|SKIL_MOUSE Ski-like protein OS=Mus musculus GN=Skil PE... 30 8.1 sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae ... 30 8.1
>sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomyces cerevisiae GN=SSK2 PE=1 SV=1 Length = 1579
Score = 31.6 bits (70), Expect = 2.8 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = +1
Query: 316 SLHTTPRKTFHQQSSKHITTKTKPNSLQI**TPQKTFHQKYNERK-GGRDGSITALTFRV 492 S+ +TP+ +Q S+KHI T+++PN T Q ++R G GS T+L Sbjct: 190 SIMSTPQNITNQTSNKHIPTRSQPNGSTSSSTLQDIVTTNSSQRSVGHHGGSTTSLRTYK 249
Query: 493 GHIQASSKTFLREL 534 + + +LR++ Sbjct: 250 KQYVLNEQLYLRKM 263
>sp|Q4P6I3|CWC25_USTMA Pre-mRNA-splicing factor CWC25 OS=Ustilago maydis GN=CWC25 PE=3 SV=1 Length = 520
Score = 31.6 bits (70), Expect = 2.8 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2
Query: 341 LSTNKAQSTLLQKQSPIPFKFD----EHRKKLSTRNTMKEKVEEMEALQHLHSESGISKP 508 L+T K+ LLQ +K + E RKKL +E+ EM+ LQ L E+G K Sbjct: 98 LNTKKSWHPLLQVNQERVWKREKEALEERKKLEELRREREQEREMQQLQRLQEEAGGKKR 157
Query: 509 LQK 517 + + Sbjct: 158 IDR 160
>sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS=Mytilus edulis GN=FP1 PE=1 SV=1 Length = 875
Score = 31.2 bits (69), Expect = 3.6 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +3
Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRWKRWKHY-STYIQSRAY 500 + K ++PPT YK K +PS ++PP + K +K Y TY +Y Sbjct: 191 YKAKPSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPTYKAKPTYKAKPSYPPTYKAKPSY 249
Query: 501 PSLFK 515 P +K Sbjct: 250 PPTYK 254
Score = 31.2 bits (69), Expect = 3.6 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +3
Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRW-KRWKHYSTYIQSRAY 500 + K ++PPT YK K +PS ++PP + K + +K TY Y Sbjct: 403 YKAKPSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPSYKAKPSYPPTYKAKPTYKAKPTY 461
Query: 501 PSLFK 515 PS +K Sbjct: 462 PSTYK 466
>sp|Q54X49|METE_DICDI 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1 Length = 825
Score = 31.2 bits (69), Expect = 3.6 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 8/55 (14%) Frame = +2
Query: 290 QYYMINLQSHSTQHQEKLSTN--------KAQSTLLQKQSPIPFKFDEHRKKLST 430 +YY +N +S+ + + KL N + ++L++++P P + + RK+L+T Sbjct: 434 EYYQLNKESNQKRRESKLIHNDIVKKRVTEITPSMLKRENPFPVRREAQRKRLTT 488
>sp|O35028|YFKR_BACSU Putative spore germination protein yfkR OS=Bacillus subtilis GN=yfkR PE=3 SV=1 Length = 384
Score = 30.8 bits (68), Expect = 4.7 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = +2
Query: 284 NDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEM 463 NDQYY+I + T ++ +ST L K P F+ R +T+N +K++ EE+ Sbjct: 301 NDQYYIIQKALNRTIKKDVISTVHRLQKL--KADPAGFQDRTIRSTATTKNLLKKEWEEV 358
Query: 464 EALQHLH 484 +H Sbjct: 359 YKDMEVH 365
>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2 Length = 1672
Score = 30.8 bits (68), Expect = 4.7 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +2
Query: 338 KLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEALQHLHSESGISKPLQK 517 K+ + QS+L +K+ P P TR EK ++ +A +H HS+SG S+ Sbjct: 1222 KIGSISRQSSLSEKKVPEPSPV--------TRRKAYEKADKPKAKEHKHSDSGASETSLS 1273
Query: 518 P 520 P Sbjct: 1274 P 1274
>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 OS=Gallus gallus GN=CHRNA4 PE=1 SV=1 Length = 622
Score = 30.8 bits (68), Expect = 4.7 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +1
Query: 241 LSHPQK*AAQTVAHE*SILHDQPPKSLHTTPRKTFHQQSSKHITTKTKPNSLQI 402 L P K ++ + + S+LH +PP+ ++P+ + H S T+ +K SL + Sbjct: 412 LEEPAKPMCKSPSGQYSMLHPEPPQVTCSSPKPSCHPLSDTQTTSISKGRSLSV 465
>sp|Q88WR8|OXAA2_LACPL Membrane protein oxaA 2 OS=Lactobacillus plantarum GN=oxaA2 PE=3 SV=1 Length = 307
Score = 30.4 bits (67), Expect = 6.2 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = +2
Query: 299 MINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEALQH 478 MIN Q ST QEK+S + Q +Q R+K +T T +EK L Sbjct: 78 MINQQRKSTYQQEKMSAVRPQMEKIQA-----------RQKAAT--TQEEKAAISNELMQ 124
Query: 479 LHSESGIS 502 L+ ++GIS Sbjct: 125 LYRDNGIS 132
>sp|Q81JV2|UVSE_BACAN UV DNA damage endonuclease OS=Bacillus anthracis GN=uvsE PE=3 SV=2 Length = 317
Score = 30.0 bits (66), Expect = 8.1 Identities = 23/95 (24%), Positives = 44/95 (46%) Frame = +2
Query: 179 LVNTSKIALVVLGTFPNKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKA 358 + ++S I + V G + NK+KA +R H N + +++ T + + A Sbjct: 144 IADSSYINIHVGGAYGNKEKA--------IERFHENIKKLPAHIKKQMTLENDDKTCTTA 195
Query: 359 QSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEM 463 ++ + ++ IPF FD H N +E +EE+ Sbjct: 196 ETLSICQKEKIPFVFDYHH---HMANLCEEPLEEL 227
>sp|Q60665|SKIL_MOUSE Ski-like protein OS=Mus musculus GN=Skil PE=2 SV=2 Length = 675
Score = 30.0 bits (66), Expect = 8.1 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = +2
Query: 278 HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVE 457 +M D+ N+ S Q K +T S KQS P + +H+K +S + E+ E Sbjct: 400 YMCDKVVAPNVSLTSAASQSKEATKAETSKSTSKQSEKPHESSQHQKTVSYPDVSLEEQE 459
Query: 458 EME 466 +M+ Sbjct: 460 KMD 462
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0BXV4 |
Definition |
tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, whole genome shotgun sequence OS=Paramecium tetraurelia |
Align length |
74 |
Score (bit) |
35.8 |
E-value |
1.6 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918368|Adiantum capillus-veneris mRNA, clone: YMU001_000112_F10. (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, who... 36 1.6 tr|Q1XBU0|Q1XBU0_MYTED Foot protein 1 OS=Mytilus edulis GN=fp-1 ... 35 3.6 tr|Q83CE2|Q83CE2_COXBU Putative uncharacterized protein OS=Coxie... 35 3.6 tr|A9NDQ0|A9NDQ0_COXBR Putative uncharacterized protein OS=Coxie... 35 3.6 tr|A0C7C4|A0C7C4_PARTE Chromosome undetermined scaffold_155, who... 35 3.6 tr|B6IZU6|B6IZU6_COXB2 Putative uncharacterized protein OS=Coxie... 34 4.7 tr|A9KFN6|A9KFN6_COXBN Putative uncharacterized protein OS=Coxie... 34 4.7 tr|B2A810|B2A810_NATTJ Peptide chain release factor 2 (BRF-2) OS... 34 6.2 tr|Q4XUR1|Q4XUR1_PLACH Putative uncharacterized protein (Fragmen... 34 6.2 tr|B4LXE7|B4LXE7_DROVI GJ22874 OS=Drosophila virilis GN=GJ22874 ... 34 6.2
>tr|A0BXV4|A0BXV4_PARTE Chromosome undetermined scaffold_135, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00033224001 PE=4 SV=1 Length = 1826
Score = 35.8 bits (81), Expect = 1.6 Identities = 20/74 (27%), Positives = 33/74 (44%) Frame = +2
Query: 278 HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVE 457 + ND Y+ + +S +HQ K S N +S + + + KF E L T N EK + Sbjct: 1125 NQNDNKYLFSSRSDENEHQNKQSVNTQESIM---KGSLHLKFPERNLALKTMNKFMEKRK 1181
Query: 458 EMEALQHLHSESGI 499 + + S+ I Sbjct: 1182 QQDFFNETDSKLAI 1195
>tr|Q1XBU0|Q1XBU0_MYTED Foot protein 1 OS=Mytilus edulis GN=fp-1 PE=2 SV=1 Length = 565
Score = 34.7 bits (78), Expect = 3.6 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +3
Query: 324 HNTKKNFPPTKLKAHYYKNKAQFPSNLMNTAKNFPPEIQ*KKRWKRWKHY-STYIQSRAY 500 + K ++PPT YK K +PS ++PP + K +K Y STY Y Sbjct: 321 YKAKSSYPPTYKAKPTYKAKPTYPST-YKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPTY 379
Query: 501 PSLFK 515 PS +K Sbjct: 380 PSTYK 384
>tr|Q83CE2|Q83CE2_COXBU Putative uncharacterized protein OS=Coxiella burnetii GN=CBU_1178 PE=4 SV=1 Length = 377
Score = 34.7 bits (78), Expect = 3.6 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2
Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469 + Q QH EKL + K Q L + P F + ++ + ++M+EK E+ + Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKSEISS 64
Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556 LQH S L KP++ F L Y + Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93
>tr|A9NDQ0|A9NDQ0_COXBR Putative uncharacterized protein OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=COXBURSA331_A1328 PE=4 SV=1 Length = 377
Score = 34.7 bits (78), Expect = 3.6 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2
Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469 + Q QH EKL + K Q L + P F + ++ + ++M+EK E+ + Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKSEISS 64
Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556 LQH S L KP++ F L Y + Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93
>tr|A0C7C4|A0C7C4_PARTE Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00035821001 PE=4 SV=1 Length = 440
Score = 34.7 bits (78), Expect = 3.6 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +2
Query: 299 MINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNT 439 M+N +S Q Q +++T K QST QK+ P +F E ++ + T NT Sbjct: 269 MMNYKSEPNQMQNQMATKKVQSTPQQKEQKSPNRF-EQQQVMQTENT 314
>tr|B6IZU6|B6IZU6_COXB2 Putative uncharacterized protein OS=Coxiella burnetii (strain CbuG_Q212) GN=CbuG_0833 PE=4 SV=1 Length = 377
Score = 34.3 bits (77), Expect = 4.7 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2
Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469 + Q QH EKL + K Q L + P F + ++ + ++M+EK E+ + Sbjct: 5 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKPEISS 64
Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556 LQH S L KP++ F L Y + Sbjct: 65 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 93
>tr|A9KFN6|A9KFN6_COXBN Putative uncharacterized protein OS=Coxiella burnetii (strain Dugway 5J108-111) GN=CBUD_1270 PE=4 SV=1 Length = 404
Score = 34.3 bits (77), Expect = 4.7 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2
Query: 305 NLQSHSTQHQEKLSTN-----KAQSTLLQKQSPIPFKFDEHRKKLSTRNTMKEKVEEMEA 469 + Q QH EKL + K Q L + P F + ++ + ++M+EK E+ + Sbjct: 32 HFQKEFQQHMEKLLEDPELQRKFQQNLNELIIEDPQAFQQRIQEKFSTSSMEEKKPEISS 91
Query: 470 LQHLHSESGISKPLQKPSYGNFTLIYTNI 556 LQH S L KP++ F L Y + Sbjct: 92 LQHNALSQSHSSTLIKPAFFLFLLYYRQL 120
>tr|B2A810|B2A810_NATTJ Peptide chain release factor 2 (BRF-2) OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=Nther_2216 PE=4 SV=1 Length = 344
Score = 33.9 bits (76), Expect = 6.2 Identities = 18/94 (19%), Positives = 47/94 (50%) Frame = +2
Query: 215 GTFPNKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIP 394 G + ++ +A + RQ + H+++ + L+ + E ++ T +++ Sbjct: 16 GFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEEDETDGTNMKEIKQAL 75
Query: 395 FKFDEHRKKLSTRNTMKEKVEEMEALQHLHSESG 496 F+F+E ++ +N +K++ +E A+ LH+ +G Sbjct: 76 FQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAG 109
>tr|Q4XUR1|Q4XUR1_PLACH Putative uncharacterized protein (Fragment) OS=Plasmodium chabaudi GN=PC105986.00.0 PE=4 SV=1 Length = 373
Score = 33.9 bits (76), Expect = 6.2 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +2
Query: 263 QHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQKQSPIPFKFDEHRKKLSTRNTM 442 Q+K + ND INLQ HST+H + + K+ T K + I K+ +NT Sbjct: 117 QNKNPNYNDNIN-INLQQHSTKHIDNVIKKKSMQTKRNKSNTIIGDHIIQPNKMEDKNTK 175
Query: 443 KE--KVEEMEA 469 KE K++E A Sbjct: 176 KEVNKLKERNA 186
>tr|B4LXE7|B4LXE7_DROVI GJ22874 OS=Drosophila virilis GN=GJ22874 PE=4 SV=1 Length = 1013
Score = 33.9 bits (76), Expect = 6.2 Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Frame = +2
Query: 227 NKQKA*ATPRNRQHKR*HMNDQYYMINLQSHSTQHQEKLSTNKAQSTLLQ-KQSPIPFKF 403 N K + + +Q ++ H Q Q H QHQ++L + Q Q +Q + Sbjct: 407 NSNKLASLQQQQQQQQQHFQQQQQQQQQQQHLQQHQKQLQQQQQQHQQKQLQQQQQQHQQ 466
Query: 404 DEHRKKLSTRNTMKEKVEEMEALQHLHSESGISKPLQKPSYGNFTLIY 547 + +++ + +++ ++ + QH H + + Q+ + N Y Sbjct: 467 QQQQQQQQLQQQQQQQQQQQQQAQHHHQQQQQQQQQQQQQFANINRNY 514
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