BP918369 |
Clone id |
YMU001_000112_F11 |
Library |
YMU01 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_F11. |
Accession |
BP918369 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL468Contig1 |
Sequence |
CCCCGAGTTTATCTCAAAAAGAATAGAGCAATTACAAAGGACCTCTTCAGTTGTGCAAAA AACTTCCTGAAGTTCCAACTCTTAGCATACAGAGTACCCCACAAACCTATTCAATTGCCT CATGTCCTTCGGTGAGAACTTTTCACCTCATGAATCATAAGAAAATAACAGGGTTGAGGT AGGAATAGCCAGACATTCATAAACCCACCTATGCGCTGACCCTGTTATCTAAAGCTGAAG TGCAGAATTCATATCAAAGAGGAAACTCATTTTCCTGCCTCTGCACGCTTTTTGAAAGAA AGCAAAACTCCATTCTGGCATACCATGGAATCTTACCAAGATGCCCCTATTCTATTGGCA CCCAACGCCTATACATTGACTCATCATGTGCATAGTGTCAAAACCTTATGTCATCTTGTT TTGAATCTGCCGGTGAACGTGGACAAGGTACTCCACATACGAAAGACCCAAAGCATTCTT GTCCTCCACAAGAAGTGAAAAGAAAAGAAACTCCAACGGATCTCCTCTTCGGCACCAGTG GAATCGCAAGTAAGAGCATCGTTCTTTTCGAATCTCATTGACCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M291 |
Definition |
sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana |
Align length |
58 |
Score (bit) |
68.2 |
E-value |
3.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S9N4 |
Definition |
tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
58 |
Score (bit) |
90.1 |
E-value |
8.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918369|Adiantum capillus-veneris mRNA, clone: YMU001_000112_F11. (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella paten... 90 8e-17 tr|A7P0Y5|A7P0Y5_VITVI Chromosome chr19 scaffold_4, whole genome... 88 3e-16 tr|Q2QSF9|Q2QSF9_ORYSJ Retrotransposon protein, putative, unclas... 84 4e-15 tr|B8BPD2|B8BPD2_ORYSI Putative uncharacterized protein OS=Oryza... 84 4e-15 tr|B8BKI0|B8BKI0_ORYSI Putative uncharacterized protein OS=Oryza... 84 8e-15 tr|Q2R4A0|Q2R4A0_ORYSJ Protein transport protein Sec24-like CEF,... 82 2e-14 tr|Q0ISQ1|Q0ISQ1_ORYSJ Os11g0482100 protein (Fragment) OS=Oryza ... 82 2e-14 tr|B8BKH9|B8BKH9_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A3CBA1|A3CBA1_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A9S9P0|A9S9P0_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|Q0INL9|Q0INL9_ORYSJ Os12g0430000 protein OS=Oryza sativa subs... 71 4e-11 tr|A3CGV8|A3CGV8_ORYSJ Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|Q27GK4|Q27GK4_ARATH Uncharacterized protein At3g44340.1 OS=Ar... 68 3e-10 tr|Q00YP1|Q00YP1_OSTTA S24C_ARATH Protein transport protein Sec2... 62 2e-08 tr|A4S4Y9|A4S4Y9_OSTLU Predicted protein OS=Ostreococcus lucimar... 62 2e-08 tr|B4I2G8|B4I2G8_DROSE GM18251 OS=Drosophila sechellia GN=GM1825... 52 2e-05 tr|Q9VQ94|Q9VQ94_DROME CG10882 OS=Drosophila melanogaster GN=CG1... 52 2e-05 tr|B4Q805|B4Q805_DROSI GD22860 OS=Drosophila simulans GN=GD22860... 52 2e-05 tr|B4NW71|B4NW71_DROYA GE15184 OS=Drosophila yakuba GN=GE15184 P... 52 2e-05 tr|B3N9H8|B3N9H8_DROER GG24544 OS=Drosophila erecta GN=GG24544 P... 51 5e-05 tr|B3MJA3|B3MJA3_DROAN GF15295 OS=Drosophila ananassae GN=GF1529... 51 5e-05 tr|B5DIC2|B5DIC2_DROPS GA25950 OS=Drosophila pseudoobscura pseud... 50 9e-05 tr|B4G951|B4G951_DROPE GL19411 OS=Drosophila persimilis GN=GL194... 50 9e-05 tr|B4KFK7|B4KFK7_DROMO GI18047 OS=Drosophila mojavensis GN=GI180... 48 5e-04 tr|B4JR04|B4JR04_DROGR GH13795 OS=Drosophila grimshawi GN=GH1379... 47 6e-04 tr|B4MVV1|B4MVV1_DROWI GK14994 OS=Drosophila willistoni GN=GK149... 46 0.001 tr|Q641I5|Q641I5_XENLA MGC80413 protein OS=Xenopus laevis GN=sec... 46 0.002 tr|A4QN88|A4QN88_DANRE Wu:fd10d12 protein (Fragment) OS=Danio re... 46 0.002 tr|O61607|O61607_DROHE F12F6.6 (Fragment) OS=Drosophila heterone... 46 0.002 tr|B6NFE8|B6NFE8_BRAFL Putative uncharacterized protein OS=Branc... 45 0.002
>tr|A9S9N4|A9S9N4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_76562 PE=4 SV=1 Length = 1007
Score = 90.1 bits (222), Expect = 8e-17 Identities = 42/58 (72%), Positives = 49/58 (84%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 VNEIR++RCSYLR +RGDP E LF++ LVEDK+ALGLSYVEYLV HRQIQN+MT Sbjct: 950 VNEIRRQRCSYLRLCMLKRGDPRELLFYNYLVEDKSALGLSYVEYLVQTHRQIQNRMT 1007
>tr|A7P0Y5|A7P0Y5_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027411001 PE=4 SV=1 Length = 77
Score = 88.2 bits (217), Expect = 3e-16 Identities = 40/58 (68%), Positives = 48/58 (82%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 VNEIR++RCSYLR CR+GD LFFS +VEDK A+GLSYVE+LVH+HRQIQ KM+ Sbjct: 20 VNEIRRQRCSYLRIKLCRKGDASGMLFFSFMVEDKTAIGLSYVEFLVHIHRQIQIKMS 77
>tr|Q2QSF9|Q2QSF9_ORYSJ Retrotransposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g24250 PE=4 SV=1 Length = 1083
Score = 84.3 bits (207), Expect = 4e-15 Identities = 41/58 (70%), Positives = 46/58 (79%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 VNEIR++RCSYLR C+ GDP F SLLVEDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 1026 VNEIRRQRCSYLRLRLCKHGDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 1083
>tr|B8BPD2|B8BPD2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38153 PE=4 SV=1 Length = 1094
Score = 84.3 bits (207), Expect = 4e-15 Identities = 41/58 (70%), Positives = 46/58 (79%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 VNEIR++RCSYLR C+ GDP F SLLVEDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 1037 VNEIRRQRCSYLRLRLCKHGDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 1094
>tr|B8BKI0|B8BKI0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36108 PE=4 SV=1 Length = 784
Score = 83.6 bits (205), Expect = 8e-15 Identities = 39/58 (67%), Positives = 46/58 (79%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 +NEIR++RCSYLR CRRG+P F S L+EDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 727 INEIRRQRCSYLRLRLCRRGEPSGDFFRSFLIEDKAPGGLSYVEFLVHVHRQIQSKMT 784
>tr|Q2R4A0|Q2R4A0_ORYSJ Protein transport protein Sec24-like CEF, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g29200 PE=4 SV=1 Length = 810
Score = 82.4 bits (202), Expect = 2e-14 Identities = 39/58 (67%), Positives = 45/58 (77%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 +NEIR++RCSYLR CRRG+P F S L EDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 753 INEIRRQRCSYLRLRLCRRGEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 810
>tr|Q0ISQ1|Q0ISQ1_ORYSJ Os11g0482100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0482100 PE=4 SV=1 Length = 577
Score = 82.4 bits (202), Expect = 2e-14 Identities = 39/58 (67%), Positives = 45/58 (77%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 +NEIR++RCSYLR CRRG+P F S L EDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 520 INEIRRQRCSYLRLRLCRRGEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 577
>tr|B8BKH9|B8BKH9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36107 PE=4 SV=1 Length = 363
Score = 82.4 bits (202), Expect = 2e-14 Identities = 39/58 (67%), Positives = 45/58 (77%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 +NEIR++RCSYLR CRRG+P F S L EDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 306 INEIRRQRCSYLRLRLCRRGEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 363
>tr|A3CBA1|A3CBA1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032573 PE=4 SV=1 Length = 834
Score = 82.4 bits (202), Expect = 2e-14 Identities = 39/58 (67%), Positives = 45/58 (77%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLEFLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKMT 409 +NEIR++RCSYLR CRRG+P F S L EDK GLSYVE+LVHVHRQIQ+KMT Sbjct: 777 INEIRRQRCSYLRLRLCRRGEPSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKMT 834
>tr|A9S9P0|A9S9P0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126303 PE=4 SV=1 Length = 1044
Score = 79.3 bits (194), Expect = 1e-13 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%) Frame = -3
Query: 582 VNEIRKERCSYLRFHWCRRGDPLE---FLFFSLLVEDKNALGLSYVEYLVHVHRQIQNKM 412 VNE+R++RCSYLR +RGDP LF + LVEDK ALGLSYVEYLV HRQIQN+M Sbjct: 984 VNELRRQRCSYLRLQLLKRGDPRGTTFLLFQNYLVEDKTALGLSYVEYLVQTHRQIQNRM 1043
Query: 411 T 409 T Sbjct: 1044 T 1044
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