BP918371 |
Clone id |
YMU001_000112_G01 |
Library |
YMU01 |
Length |
393 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000112_G01. |
Accession |
BP918371 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1155Contig1 |
Sequence |
GGCAAACAATGCGTGCATCGAAGACTCCTTGTCGGTGATGGATATGTGATGATAACAAAA GGAGATAGCATTAAGCGGTTCTTTGAACATGCAGAGGAAGCTGAAGAGGAGGAGGACGAT GATGGAATGGACAAGAGTGGAAGTGAACCTGAGAATGAAGGCTTTCGTGTTCAAAAGCAC GCGAAAAGTCCCGAACTTGCACGGGAGTTTCTTCTGGATGCAGCTACAATAATTTTCAAA GAGCAGGTTGAAAAGGCCTTCCGAGAAGGAACTGCCAGACAAAATGCTCACACAATCTTT GTATGTCTTGCTCTGAATTTATTAGAAGAGCGCATACATGTTGCGTACAAGGAAATCAGT ACGCTGGAAAAACAGAAGCAGCTCCTTGAAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6GVH4 |
Definition |
sp|Q6GVH4|GGNB2_CHICK Gametogenetin-binding protein 2 OS=Gallus gallus |
Align length |
84 |
Score (bit) |
40.4 |
E-value |
0.003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TB71 |
Definition |
tr|A9TB71|A9TB71_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
131 |
Score (bit) |
176.0 |
E-value |
4.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918371|Adiantum capillus-veneris mRNA, clone: YMU001_000112_G01. (393 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TB71|A9TB71_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|A7PVZ1|A7PVZ1_VITVI Chromosome chr8 scaffold_34, whole genome... 172 7e-42 tr|Q9M2P3|Q9M2P3_ARATH Putative uncharacterized protein T10K17.2... 171 2e-41 tr|Q8H856|Q8H856_ORYSJ Os03g0226600 protein OS=Oryza sativa subs... 171 2e-41 tr|A2XE49|A2XE49_ORYSI Putative uncharacterized protein OS=Oryza... 171 2e-41 tr|A9S718|A9S718_PHYPA Predicted protein (Fragment) OS=Physcomit... 169 6e-41 tr|P93750|P93750_ARATH Putative uncharacterized protein At2g4196... 167 2e-40 tr|Q33BI2|Q33BI2_ORYSJ Os10g0105400 protein OS=Oryza sativa subs... 166 5e-40 tr|B8BFJ5|B8BFJ5_ORYSI Putative uncharacterized protein OS=Oryza... 166 5e-40 tr|Q8RWH6|Q8RWH6_ARATH Putative uncharacterized protein At2g4196... 166 7e-40 tr|Q8SBB1|Q8SBB1_ORYSJ Putative uncharacterized protein OSJNBa00... 153 4e-36 tr|A3C1U6|A3C1U6_ORYSJ Putative uncharacterized protein OS=Oryza... 153 4e-36 tr|A8I8Q8|A8I8Q8_CHLRE Predicted protein (Fragment) OS=Chlamydom... 68 3e-10 tr|B7ZP33|B7ZP33_MOUSE Putative uncharacterized protein OS=Mus m... 39 0.13 tr|A4QPD5|A4QPD5_MOUSE Ggnbp2 protein OS=Mus musculus GN=Ggnbp2 ... 39 0.13 tr|Q4R3A3|Q4R3A3_MACFA Testis cDNA clone: QtsA-18318, similar to... 39 0.13 tr|B4DWN7|B4DWN7_HUMAN cDNA FLJ56588, highly similar to Protein ... 39 0.13 tr|B3KW40|B3KW40_HUMAN cDNA FLJ42090 fis, clone TESOP2001605, hi... 39 0.13 tr|B2RPK7|B2RPK7_HUMAN Gametogenetin binding protein 2 (Zinc fin... 39 0.13 tr|A8K3S2|A8K3S2_HUMAN cDNA FLJ75663, highly similar to Homo sap... 39 0.13 tr|B8D5G3|B8D5G3_9CREN NADH/ubiquinone/plastoquinone (Complex I)... 36 1.1 tr|Q9ZCM1|Q9ZCM1_RICPR CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF... 35 1.9 tr|Q55FI2|Q55FI2_DICDI Putative uncharacterized protein OS=Dicty... 35 2.4 tr|Q68W35|Q68W35_RICTY Cytochrome c-type biogenesis protein CcmF... 34 4.1 tr|B6H4Q9|B6H4Q9_PENCH Pc13g10090 protein OS=Penicillium chrysog... 34 4.1 tr|A6LIY4|A6LIY4_THEM4 Putative uncharacterized protein OS=Therm... 33 5.4 tr|A6DHH0|A6DHH0_9BACT Putative uncharacterized protein OS=Lenti... 33 5.4 tr|Q228Z0|Q228Z0_TETTH Putative uncharacterized protein OS=Tetra... 33 5.4 tr|Q5LB35|Q5LB35_BACFN Putative uncharacterized protein OS=Bacte... 33 7.1 tr|B6NN39|B6NN39_BRAFL Putative uncharacterized protein (Fragmen... 33 7.1
>tr|A9TB71|A9TB71_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142915 PE=4 SV=1 Length = 554
Score = 176 bits (447), Expect = 4e-43 Identities = 88/131 (67%), Positives = 106/131 (80%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVHRRL+VGDGY+ IT+G+SI+RFF +D G++ E E R QKH Sbjct: 362 GQLCVHRRLIVGDGYLSITQGESIQRFFERAEQTEEEEDEDAIDNDGNDYEGEASRPQKH 421
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAR+FLLDAAT+IFKEQVEKAFREGTARQNAH+IFVC+AL+LLEER+ VA KEI+ Sbjct: 422 AKSPELARDFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCVALSLLEERVRVACKEIT 481
Query: 361 TLEKQKQLLEE 393 +LEKQK+LLEE Sbjct: 482 SLEKQKKLLEE 492
>tr|A7PVZ1|A7PVZ1_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025409001 PE=4 SV=1 Length = 1182
Score = 172 bits (436), Expect = 7e-42 Identities = 93/144 (64%), Positives = 105/144 (72%), Gaps = 13/144 (9%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+QCVH RL+VGDG+V IT+G+SI+RFF MDK G+E + E R QKH Sbjct: 363 GQQCVHCRLVVGDGFVTITRGESIRRFFEHAEEAEEEEDDDSMDKDGNELDGECSRPQKH 422
Query: 181 AKSPELAREFLLDAATIIFKE-------------QVEKAFREGTARQNAHTIFVCLALNL 321 AKSPELAREFLLDAAT+IFKE QVEKAFREGTARQNAH+IFVCLAL L Sbjct: 423 AKSPELAREFLLDAATVIFKEQASVLQLILHCCFQVEKAFREGTARQNAHSIFVCLALKL 482
Query: 322 LEERIHVAYKEISTLEKQKQLLEE 393 LEER+HVA KEI TLEKQ +LLEE Sbjct: 483 LEERVHVACKEIITLEKQMKLLEE 506
>tr|Q9M2P3|Q9M2P3_ARATH Putative uncharacterized protein T10K17.260 OS=Arabidopsis thaliana GN=T10K17.260 PE=4 SV=1 Length = 1209
Score = 171 bits (433), Expect = 2e-41 Identities = 88/131 (67%), Positives = 101/131 (77%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVH RL+VGDG+V I +G+SI+RFF MDK G+E + E R QKH Sbjct: 404 GQNCVHGRLVVGDGFVSIKRGESIRRFFEHAEEAEEEEDEDMMDKDGNELDGECSRPQKH 463
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAAT+IFKEQVEKAFREGTARQNAH+IFVCL L LLE+ +HVA KEI Sbjct: 464 AKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLTLKLLEQHLHVACKEII 523
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 524 TLEKQVKLLEE 534
>tr|Q8H856|Q8H856_ORYSJ Os03g0226600 protein OS=Oryza sativa subsp. japonica GN=OJ1626B05.1 PE=4 SV=1 Length = 1176
Score = 171 bits (433), Expect = 2e-41 Identities = 86/131 (65%), Positives = 101/131 (77%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVH RL+VG+G+V ITKG+SI+ FF MD+ G++ + +G QKH Sbjct: 365 GQSCVHHRLVVGNGFVTITKGESIRSFFEHAEEAEEEDEEDAMDRDGNDLDGDGLHPQKH 424
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAA +IFKEQVEKAFREGTARQNAH+IFV LAL LLEER+HVA KEI Sbjct: 425 AKSPELAREFLLDAAAVIFKEQVEKAFREGTARQNAHSIFVSLALELLEERVHVACKEII 484
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 485 TLEKQNKLLEE 495
>tr|A2XE49|A2XE49_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10597 PE=4 SV=1 Length = 1176
Score = 171 bits (433), Expect = 2e-41 Identities = 86/131 (65%), Positives = 101/131 (77%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVH RL+VG+G+V ITKG+SI+ FF MD+ G++ + +G QKH Sbjct: 365 GQSCVHHRLVVGNGFVTITKGESIRSFFEHAEEAEEEDEEDAMDRDGNDLDGDGLHPQKH 424
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAA +IFKEQVEKAFREGTARQNAH+IFV LAL LLEER+HVA KEI Sbjct: 425 AKSPELAREFLLDAAAVIFKEQVEKAFREGTARQNAHSIFVSLALELLEERVHVACKEII 484
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 485 TLEKQNKLLEE 495
>tr|A9S718|A9S718_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_125112 PE=4 SV=1 Length = 572
Score = 169 bits (428), Expect = 6e-41 Identities = 90/138 (65%), Positives = 107/138 (77%), Gaps = 7/138 (5%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXX------GMDKSGSEPENEG 162 G+ CVHRRL++GDGYV ITKG+SI+RFF +DK G++ E E Sbjct: 345 GQLCVHRRLIIGDGYVSITKGESIQRFFERAEETEEEQFLICVQDEDAVDKDGNDYEGEA 404
Query: 163 FRVQKHAKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHV 342 R QKHAKSPELAR+FLLDAAT+IFKEQVEKAFREGTARQNAH+IFVCLAL+LLEER+ V Sbjct: 405 SRPQKHAKSPELARDFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALSLLEERVRV 464
Query: 343 AYKEISTLEKQK-QLLEE 393 A KEI++LEKQ+ +LLEE Sbjct: 465 ACKEITSLEKQQNKLLEE 482
>tr|P93750|P93750_ARATH Putative uncharacterized protein At2g41960 OS=Arabidopsis thaliana GN=At2g41960 PE=4 SV=1 Length = 1215
Score = 167 bits (424), Expect = 2e-40 Identities = 84/131 (64%), Positives = 101/131 (77%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+QCVH RL+VGDG+V I +G+ I+ FF +DK G+E + E R QKH Sbjct: 373 GQQCVHSRLVVGDGFVSIKRGECIRMFFEHAEEAEEEEDEVLIDKDGNELDGECLRPQKH 432
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAAT+IFKEQVEKAFR+GTARQNAH+IFVCL+ LLE+R+H+A KEI Sbjct: 433 AKSPELAREFLLDAATVIFKEQVEKAFRDGTARQNAHSIFVCLSSELLEQRVHIACKEIV 492
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 493 TLEKQNKLLEE 503
>tr|Q33BI2|Q33BI2_ORYSJ Os10g0105400 protein OS=Oryza sativa subsp. japonica GN=Os10g0105400 PE=4 SV=1 Length = 1168
Score = 166 bits (420), Expect = 5e-40 Identities = 83/131 (63%), Positives = 100/131 (76%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVHRRL+VGDG+V ITKG+SI+ FF MD+ G++ + +G QKH Sbjct: 362 GQSCVHRRLIVGDGFVTITKGESIQSFFEHAEEAEEEDEDDAMDRDGNDTDVDGVHPQKH 421
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAA +IFKEQVEK+ RE TA+QNAH++FV LAL LLEER+HVA KEI Sbjct: 422 AKSPELAREFLLDAAAVIFKEQVEKSLREATAQQNAHSVFVSLALKLLEERVHVACKEII 481
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 482 TLEKQTKLLEE 492
>tr|B8BFJ5|B8BFJ5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32509 PE=4 SV=1 Length = 1176
Score = 166 bits (420), Expect = 5e-40 Identities = 83/131 (63%), Positives = 100/131 (76%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+ CVHRRL+VGDG+V ITKG+SI+ FF MD+ G++ + +G QKH Sbjct: 362 GQSCVHRRLIVGDGFVTITKGESIQSFFEHAEEAEEEDEDDAMDRDGNDTDVDGVHPQKH 421
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAA +IFKEQVEK+ RE TA+QNAH++FV LAL LLEER+HVA KEI Sbjct: 422 AKSPELAREFLLDAAAVIFKEQVEKSLREATAQQNAHSVFVSLALKLLEERVHVACKEII 481
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 482 TLEKQTKLLEE 492
>tr|Q8RWH6|Q8RWH6_ARATH Putative uncharacterized protein At2g41960 (Fragment) OS=Arabidopsis thaliana GN=At2g41960 PE=2 SV=1 Length = 534
Score = 166 bits (419), Expect = 7e-40 Identities = 83/131 (63%), Positives = 100/131 (76%) Frame = +1
Query: 1 GKQCVHRRLLVGDGYVMITKGDSIKRFFXXXXXXXXXXXXXGMDKSGSEPENEGFRVQKH 180 G+QCVH RL+VGDG+V I +G+ I+ FF +DK G+E + E R QKH Sbjct: 373 GQQCVHSRLVVGDGFVSIKRGECIRMFFEHAEEAEEEEDEVLIDKDGNELDGECLRPQKH 432
Query: 181 AKSPELAREFLLDAATIIFKEQVEKAFREGTARQNAHTIFVCLALNLLEERIHVAYKEIS 360 AKSPELAREFLLDAAT+IFKEQVEKAFR+GTA QNAH+IFVCL+ LLE+R+H+A KEI Sbjct: 433 AKSPELAREFLLDAATVIFKEQVEKAFRDGTAHQNAHSIFVCLSSELLEQRVHIACKEIV 492
Query: 361 TLEKQKQLLEE 393 TLEKQ +LLEE Sbjct: 493 TLEKQNKLLEE 503
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