BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918372|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_G02.
         (505 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34137|PTP1_DICDI Tyrosine-protein phosphatase 1 OS=Dictyoste...    30   6.5  
sp|Q9HUK1|PARC_PSEAE DNA topoisomerase 4 subunit A OS=Pseudomona...    30   6.5  

>sp|P34137|PTP1_DICDI Tyrosine-protein phosphatase 1
           OS=Dictyostelium discoideum GN=ptpA1-1 PE=2 SV=2
          Length = 522

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = -2

Query: 264 GSLANTCLHKVKNSCINPSHT*SNPSADPIGSSNDLYTNQGSLR*TR*GSFPSSPISVSP 85
           GS+ N   +K+  S + P  T SN S     SS+  ++  GSL     GS P++  S SP
Sbjct: 12  GSIENKT-NKIDISVLRPLPTRSNSSISLSSSSHSSFSRMGSL-----GSLPTNSGSSSP 65

Query: 84  LY 79
            Y
Sbjct: 66  YY 67


>sp|Q9HUK1|PARC_PSEAE DNA topoisomerase 4 subunit A OS=Pseudomonas
           aeruginosa GN=parC PE=3 SV=1
          Length = 754

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
 Frame = +2

Query: 89  LTLIGLDGKLPYLVYRRL--PWL------V*RSLELPMGSAEGLLHVCEGLMQLFLTL 238
           L +IGLDGK      R+L   WL      V R L+  +   E  LH+ +GL+  FL L
Sbjct: 336 LNIIGLDGKPQVKDLRQLLSEWLQFRIGTVRRRLQFRLDKVERRLHLLDGLLIAFLNL 393

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918372|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_G02.
         (505 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0CSJ6|B0CSJ6_LACBS Expansin family protein OS=Laccaria bicol...    34   3.5  
tr|B6TQT6|B6TQT6_MAIZE Dof domain, zinc finger family protein OS...    33   7.6  

>tr|B0CSJ6|B0CSJ6_LACBS Expansin family protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_306030 PE=4 SV=1
          Length = 263

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
 Frame = -2

Query: 318 YTGLHDATLHTVIFIDA--RGSLANTCLHKVKNSCINPSHT*S--------NPSADPIGS 169
           Y  L     H   F D+     LAN  L      C NPS T S        +PSADP+  
Sbjct: 44  YMALQCNVKHNTAFFDSCCHPLLANESLATRPAQC-NPSATPSTAAAASAASPSADPVDD 102

Query: 168 SNDLYTNQGSLR*TR*GSFPSSPISVSPLYP 76
             D Y + G        S P +P + +PL P
Sbjct: 103 DEDEYCDDGDDEPPSSSSAPIAPAATTPLVP 133


>tr|B6TQT6|B6TQT6_MAIZE Dof domain, zinc finger family protein
           OS=Zea mays PE=2 SV=1
          Length = 315

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = -3

Query: 383 SNKSVAKPLYDCHTSK--WSSC*ATRDFMMPHCTPLSS*TQEGPWLIHAFTRSRTAASIP 210
           +N + ++P + C   +  W+   + R+       P+   T++ P L H    +R A   P
Sbjct: 109 NNYNTSQPRHFCRACRRYWTLGGSLRN------VPVGGSTRKRPRLAHHHQHARLAPPAP 162

Query: 209 HIHEATPLQIP*VAPMTSTPTKEASDK-RGKEASHLAQL 96
           H+   TP+  P + P +ST + +   + +G+    L  L
Sbjct: 163 HVFGLTPMMPPPLQPSSSTSSSQGQGQGQGQSGGLLGSL 201