BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918380|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_G10.
         (372 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99J23|GHDC_MOUSE GH3 domain-containing protein OS=Mus muscul...    31   1.7  
sp|P56157|DPO3A_HELPY DNA polymerase III subunit alpha OS=Helico...    31   1.7  
sp|Q9ZJF9|DPO3A_HELPJ DNA polymerase III subunit alpha OS=Helico...    31   2.2  
sp|Q89RW4|Y2648_BRAJA Uncharacterized RNA methyltransferase bll2...    29   6.3  
sp|A7MPR2|UXAB_ENTS8 Altronate oxidoreductase OS=Enterobacter sa...    29   8.3  

>sp|Q99J23|GHDC_MOUSE GH3 domain-containing protein OS=Mus musculus
           GN=Ghdc PE=2 SV=1
          Length = 532

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 203 PTAPWLCANTWLGKPLGIVYP 265
           PT+PW C+  WLG  LG V P
Sbjct: 157 PTSPWPCSVPWLGHALGRVSP 177


>sp|P56157|DPO3A_HELPY DNA polymerase III subunit alpha
           OS=Helicobacter pylori GN=dnaE PE=3 SV=1
          Length = 1211

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 286 QYDRILYRIHNPERLSKPGICT*PWSSWSFCQARPQTIYPRLVE 155
           +YD +  R  NPER+S P I T       FCQ R + I   ++E
Sbjct: 407 KYDLLFERFLNPERISMPDIDT------DFCQRRRKEIIEYMIE 444


>sp|Q9ZJF9|DPO3A_HELPJ DNA polymerase III subunit alpha
           OS=Helicobacter pylori J99 GN=dnaE PE=3 SV=1
          Length = 1211

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 286 QYDRILYRIHNPERLSKPGICT*PWSSWSFCQARPQTIYPRLVE 155
           +YD +  R  NPER+S P I T       FCQ R + I   ++E
Sbjct: 407 KYDLLFERFLNPERVSMPDIDT------DFCQRRRKEIIEYMIE 444


>sp|Q89RW4|Y2648_BRAJA Uncharacterized RNA methyltransferase bll2648
           OS=Bradyrhizobium japonicum GN=bll2648 PE=3 SV=1
          Length = 415

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 213 GAVGAFVKPDHKPFIRD*LKIKS*LRCKPRTIRREPL-PRKLRNF 82
           GAV A  K    P ++        +RC+PR + R PL P++LR+F
Sbjct: 304 GAVAALAKAARTPGLKP-------IRCEPRDLFRRPLVPQELRDF 341


>sp|A7MPR2|UXAB_ENTS8 Altronate oxidoreductase OS=Enterobacter
           sakazakii (strain ATCC BAA-894) GN=uxaB PE=3 SV=1
          Length = 483

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 325 MFRNLVRDV*VYCQYDRILYRIHNPE 248
           + R++ R++ VY QYD  L   HNP+
Sbjct: 88  LIRSVNREISVYAQYDEFLKLAHNPD 113

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918380|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_G10.
         (372 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q14MM8|Q14MM8_SPICI Plectrovirus spv1-r8a2b orf 1 n-terminal ...    34   3.2  
tr|A9NJV6|A9NJV6_PICSI Putative uncharacterized protein OS=Picea...    27   8.3  
tr|B3LZR3|B3LZR3_DROAN GF18292 OS=Drosophila ananassae GN=GF1829...    33   9.2  

>tr|Q14MM8|Q14MM8_SPICI Plectrovirus spv1-r8a2b orf 1 n-terminal and
           c-terminal truncated transmembrane protein
           OS=Spiroplasma citri GN=orf1 PE=4 SV=1
          Length = 306

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
 Frame = +1

Query: 1   TDLVSALRLEMTVLPDLKELVKECFLHKISQLPRKWLSSDSSWL-----TSQLALDFQLI 165
           TD + +  ++  +    KE+V+    +K +  PR  L  D+  L        L  +  + 
Sbjct: 96  TDFIYSFAVKYKMFNVSKEIVENVDRYKENHYPRVKLKVDNWKLILNISNENLQKEINIK 155

Query: 166 SDKWFVV-GLDKSSNCSMVMCKY 231
           +DKW++V G +K SN ++  CK+
Sbjct: 156 NDKWYIVIGRNKRSNSNISFCKF 178


>tr|A9NJV6|A9NJV6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 52

 Score = 26.9 bits (58), Expect(2) = 8.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  LHKISQLPRKWLSSDSSWLTS 138
           +HK+   PR WLS  SSWL S
Sbjct: 1   MHKLKS-PRLWLSPPSSWLCS 20



 Score = 25.8 bits (55), Expect(2) = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 200 APTAPWLCANTWLGKPLG 253
           +P + WLC+NT   +P+G
Sbjct: 12  SPPSSWLCSNTTTPRPIG 29


>tr|B3LZR3|B3LZR3_DROAN GF18292 OS=Drosophila ananassae GN=GF18292
           PE=4 SV=1
          Length = 394

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 292 YCQYDRILYRIHNPERLSKPGICT*PWSSW-SFCQARPQTIYPRLVENQE 146
           +CQ +  + R+HNP  +S PG    P S+  S C  +P T++ R+  N++
Sbjct: 43  HCQVE--MERLHNPISVSSPGTAAPPSSAQSSSCGRQPWTVFQRVQRNRQ 90