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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918385
Clone id YMU001_000112_H05
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAGTGGAGAGGAGAGTCCATCAAGGGTGGCTATGGATGGAGGCGAAGTCGAACGCAAAAG
GTCCTTGGAGGTCAAGATCTGGGAGTCACGCGATAAGGGTGAGGGAATCTTGAAGAAATC
TTTTTTCTAGAGGAGTGCCAGTATGTACTCTGATGATGTGTCCATTCTTGAAAGGAATGT
GACGATGTGATCAAGCATGCTTTAGGTTGTTGGCACGGCCCTTTAACGATCTATGTTTTG
ATGGTGGTGCGAAAAAAGAAAAATTGCAATGAGTTGGCACTGACGTGTCTCAAGTTTTGT
GGAAAGTGTGGATGTGTATTGGGATGGCATCTCCAGAACTCACATTTGCATAGCTCGTCC
AAGCCATCTTGCCTTTGTTGTCCTCAATTGGAAAACACACACATTCCCTCATGCAAA
■■Homology search results ■■ -
sp_hit_id O74853
Definition sp|O74853|FAP1H_SCHPO FKBP12-associated protein 1 homolog OS=Schizosaccharomyces pombe
Align length 84
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918385|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_H05.
         (417 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O74853|FAP1H_SCHPO FKBP12-associated protein 1 homolog OS=Sch...    33   0.44 
sp|O82277|TCP10_ARATH Transcription factor TCP10 OS=Arabidopsis ...    33   0.58 
sp|Q61SD1|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis brig...    31   2.2  
sp|Q9BSD3|CL032_HUMAN Uncharacterized protein C12orf32 OS=Homo s...    31   2.2  
sp|P03517|VGLM_PTPV Envelope glycoprotein OS=Punta toro phlebovi...    30   2.9  
sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa GN=P...    30   2.9  
sp|Q19338|MON2_CAEEL Protein MON2 homolog OS=Caenorhabditis eleg...    30   2.9  
sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor ...    30   4.9  
sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditi...    30   4.9  
sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest v...    30   4.9  
sp|O43482|MS18B_HUMAN Protein Mis18-beta OS=Homo sapiens GN=OIP5...    29   6.4  
sp|P35928|POLR_ELV RNA replicase polyprotein OS=Erysimum latent ...    29   6.4  
sp|Q71M42|PC11X_PANTR Protocadherin-11 X-linked OS=Pan troglodyt...    29   6.4  
sp|Q6WYY1|PC11X_PANPA Protocadherin-11 X-linked OS=Pan paniscus ...    29   6.4  
sp|Q9BZA7|PC11X_HUMAN Protocadherin-11 X-linked OS=Homo sapiens ...    29   6.4  
sp|Q6X862|PC11X_GORGO Protocadherin-11 X-linked OS=Gorilla goril...    29   6.4  
sp|P24617|T2P2_NEIGO Type-2 restriction enzyme NgoPII OS=Neisser...    29   8.4  

>sp|O74853|FAP1H_SCHPO FKBP12-associated protein 1 homolog
           OS=Schizosaccharomyces pombe GN=fap1 PE=1 SV=1
          Length = 1077

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
 Frame = +1

Query: 208 CWHGPLTIYVLMVVRKKKNCNELALTCLKFCGK---CG--CVLGWHLQNSHLHSSSKP-S 369
           C  G   I  L+   ++K+C++   TC   CGK   CG  C    HL +    S +    
Sbjct: 449 CPCGKEDISFLLKGHERKSCSDPIPTCENICGKLLSCGHRCKYKCHLGSCGTCSETLTIP 508

Query: 370 CLC--------CPQLENTHIPSCK 417
           C C        C QL+N  IP+C+
Sbjct: 509 CRCTANEVQVTCEQLQNGFIPTCE 532


>sp|O82277|TCP10_ARATH Transcription factor TCP10 OS=Arabidopsis
           thaliana GN=TCP10 PE=1 SV=1
          Length = 361

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
 Frame = -2

Query: 326 HPNTHPHFPQNLRHVSANSLQXXXFRTTIKT*IVKGPCQQPKACLITSS---HSFQEWTH 156
           HP+ H H P  +  +++   Q            + G  QQ +   + SS   HSF+ W H
Sbjct: 249 HPHHHHHQPSMMTLLNSQQQQV----------FLGGQQQQQQRGTLQSSLFPHSFRSWDH 298

Query: 155 HQSTY-WHSSRKKISSRF 105
           HQ+T   H  + + SS F
Sbjct: 299 HQTTSDHHHHQNQASSMF 316


>sp|Q61SD1|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis briggsae
            GN=CBG06228 PE=3 SV=1
          Length = 1645

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 261  KLQ*VGTDVSQVLWKV-WMCIGMASPELTFA*LVQAILPLLSSIGKHTHSL 410
            K++ VG D S+ +W V + C+  +  +  FA    A   LL ++  H H+L
Sbjct: 957  KMESVGNDASEAVWMVLYTCLSESCVDTRFAVRKSACQTLLQTVTAHGHAL 1007


>sp|Q9BSD3|CL032_HUMAN Uncharacterized protein C12orf32 OS=Homo
           sapiens GN=C12orf32 PE=1 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 173 FQEWTHHQSTYWHSSRKKISSRFPHPYRVTPRS*PPRTFCVRL 45
           F  +  HQ+   HSSRK  +S+FPH    +P+S    T  + L
Sbjct: 69  FPAYQKHQNRARHSSRKPTTSKFPHLTFESPQSSSSETLGIPL 111


>sp|P03517|VGLM_PTPV Envelope glycoprotein OS=Punta toro phlebovirus
           GN=M PE=3 SV=1
          Length = 1313

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 320 WDGISRTHICIARPSHLAFVVLNWKTHTFPH 412
           WD  SR  +C +  S L  +V  W+TH+  H
Sbjct: 24  WDSTSRNDMCFSNDSPLEGLVYYWETHSKRH 54


>sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa
            GN=PCDH11X PE=2 SV=1
          Length = 1117

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -2

Query: 209  QPKACLITSSHSFQEWTHHQSTYWHSSRKKISSRFPHPYRVTPRS*PPRTFCVRLRLHP* 30
            QP+  L +  H  QE     +     S  K SS    PY V+  S P  TF   + +H  
Sbjct: 952  QPETPLNSKHHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTR 1011

Query: 29   PPLMDS 12
            PP+ ++
Sbjct: 1012 PPMKEA 1017


>sp|Q19338|MON2_CAEEL Protein MON2 homolog OS=Caenorhabditis elegans
            GN=F11A10.4 PE=2 SV=2
          Length = 1646

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 261  KLQ*VGTDVSQVLWKV-WMCIGMASPELTFA*LVQAILPLLSSIGKHTHSL 410
            K++ VG D S+ +W V + C+  +  +  FA    A   LL ++  H H+L
Sbjct: 957  KMESVGNDASEAVWMVLYTCLSESCVDSRFAVRKSACQTLLQTVTAHGHAL 1007


>sp|Q5VY43|PEAR1_HUMAN Platelet endothelial aggregation receptor 1
           OS=Homo sapiens GN=PEAR1 PE=1 SV=1
          Length = 1037

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 271 ELALTCLKFCGKCGCVLGWHLQNSHLHSSSKPSCLCCPQLENTHIPSCK 417
           E +L+C    G+C C+ GW    + LH +       CPQ  +TH P C+
Sbjct: 368 EHSLSCHPMNGECSCLPGW----AGLHCNES-----CPQ--DTHGPGCQ 405


>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis
           elegans GN=lam-2 PE=1 SV=2
          Length = 1535

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +1

Query: 298 CGKCGCVLGWHLQNSHLHSSSKPSCLCCPQLENTHIPSCK 417
           C  CGC     L N     SS  SC C   +E      CK
Sbjct: 432 CKNCGCETSGSLNNQPRCDSSSGSCSCKLNVEGRQCDKCK 471


>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus
            PE=2 SV=2
          Length = 2410

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -2

Query: 92   RVTPRS*PPRTFCVRLRLHP*PP 24
            R TP   PPRTF VR  +H  PP
Sbjct: 1714 RTTPPPKPPRTFTVRAEVHQAPP 1736
tr_hit_id Q4FXI5
Definition tr|Q4FXI5|Q4FXI5_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin
Align length 42
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918385|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_H05.
         (417 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4FXI5|Q4FXI5_LEIMA Putative uncharacterized protein OS=Leish...    35   2.4  
tr|B2CVP2|B2CVP2_ARATH TCP10 (Fragment) OS=Arabidopsis thaliana ...    34   4.1  
tr|Q6WNV6|Q6WNV6_9REOV VP3 OS=Avian rotavirus A PE=4 SV=1              33   9.2  
tr|B4M7B5|B4M7B5_DROVI GJ16487 OS=Drosophila virilis GN=GJ16487 ...    33   9.2  
tr|B2CVP5|B2CVP5_ARATH TCP10 (Fragment) OS=Arabidopsis thaliana ...    33   9.2  

>tr|Q4FXI5|Q4FXI5_LEIMA Putative uncharacterized protein
           OS=Leishmania major strain Friedlin GN=LMJ_0860 PE=4
           SV=1
          Length = 613

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 289 LKFCGKCGCVLGWHLQNSHLHSSSKPSCLCCPQLENTHIPSC 414
           L +C  C CV+GWH    H+  SS  + L        H PSC
Sbjct: 526 LNYCYVCDCVIGWHRMAEHVMGSSHRTAL-------EHNPSC 560


>tr|B2CVP2|B2CVP2_ARATH TCP10 (Fragment) OS=Arabidopsis thaliana
           GN=TCP10 PE=4 SV=1
          Length = 159

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = -2

Query: 326 HPNTHPHFPQNLRHVSANSLQXXXFRTTIKT*IVKGPCQQPKACLITSS---HSFQEWTH 156
           HP+ H H P  +  +++   Q            + G  QQ +   + SS   HSF+ W H
Sbjct: 72  HPHHHHHQPSMMTLLNSQQQQV----------FLGGQQQQQQRGTLQSSLFPHSFRSWDH 121

Query: 155 HQST--YWHSSRKKISSRF 105
           HQ+T  + H  + + SS F
Sbjct: 122 HQTTSDHHHHHQNQASSMF 140


>tr|Q6WNV6|Q6WNV6_9REOV VP3 OS=Avian rotavirus A PE=4 SV=1
          Length = 829

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 24/114 (21%), Positives = 47/114 (41%)
 Frame = -1

Query: 402 VCVFQLRTTKARWLGRAMQM*VLEMPSQYTSTLSTKLETRQCQLIAIFLFSHHHQNIDR* 223
           +C  ++   K R++ +      +         +S   + +      + L+S  ++N DR 
Sbjct: 409 ICTQEMLQDKKRFVPKGAFYSFINNTKTDNVFVSPVYKVKPTNKFVVALYSLSNENNDRD 468

Query: 222 RAVPTT*SMLDHIVTFLSRMDTSSEYILALL*KKDFFKIPSPLSRDSQILTSKD 61
           + +  T      I+T       + EY L      D+  +PS +SR+  I+TS D
Sbjct: 469 KVIDFTQKQKRGIITLRMNNTFNYEYRLQFKSTYDYLYLPSEVSREGTIVTSYD 522


>tr|B4M7B5|B4M7B5_DROVI GJ16487 OS=Drosophila virilis GN=GJ16487
           PE=4 SV=1
          Length = 880

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 292 KFCGKCGCVLGWHLQNSHLHSSSKPSCLCCPQLENTH 402
           K+C  C C   +H  N HLH+S+ P+   C    N++
Sbjct: 659 KYCKHCCCNGRYHSGNIHLHASNNPTASICNSNSNSN 695


>tr|B2CVP5|B2CVP5_ARATH TCP10 (Fragment) OS=Arabidopsis thaliana
           GN=TCP10 PE=4 SV=1
          Length = 158

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
 Frame = -2

Query: 326 HPNTHPHFPQNLRHVSANSLQXXXFRTTIKT*IVKGPCQQPKACLITSS---HSFQEWTH 156
           HP+ H H P  +  +++   Q            + G  QQ +   + SS   HSF+ W H
Sbjct: 72  HPHHHHHQPSMMTLLNSQQQQV----------FLGGQQQQQQRGTLQSSLFPHSFRSWDH 121

Query: 155 HQSTY-WHSSRKKISSRF 105
           HQ+T   H  + + SS F
Sbjct: 122 HQTTSDHHHHQNQASSMF 139