BP918389
Clone id YMU001_000112_H10
Library
Length 297
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000112_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGGAGCAAGCTCAATAATACATGTTGCCTTTGAGTCCTTCATTGGCCATGCTTCGTGTT
CGTGGTGTTTGCTATATCAAACACCATCCCCTCTTTCCTTCTCTCATTAGCATGTGAAGG
CATCTCATCAGCTGTTGGAGTTAATGGAACTTTATCAAAGATGAGAAACATTGTTGTTGC
TTTGATCTGTGGTAGGCAAGCTAAATGCCTCATAACAATTTGTCTTCCAAATGGCTTGGT
AAAGTCATTGGCTATTGCAGATGGTCTTCATGGGGCACGATGCTCCTTATATGTGTA
■■Homology search results ■■ -
sp_hit_id Q9LWR0
Definition sp|Q9LWR0|TIP42_ORYSJ Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918389|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_H10.
(297 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LWR0|TIP42_ORYSJ Probable aquaporin TIP4-2 OS=Oryza sativa ... 29 6.5
sp|Q7S1I0|ATG26_NEUCR Sterol 3-beta-glucosyltransferase OS=Neuro... 29 8.4
sp|Q49823|Y2424_MYCLE Uncharacterized protein ML2424 OS=Mycobact... 29 8.5

>sp|Q9LWR0|TIP42_ORYSJ Probable aquaporin TIP4-2 OS=Oryza sativa
subsp. japonica GN=TIP4-2 PE=2 SV=2
Length = 256

Score = 29.3 bits (64), Expect = 6.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2

Query: 122 ISSAVGVNGTLSKMRNIVVALICGRQAKCLITICLPNGLVKSL-AIADGL 268
+S AVG + TL + V A + G CL+ CL G + A+ADG+
Sbjct: 92 LSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGV 141


>sp|Q7S1I0|ATG26_NEUCR Sterol 3-beta-glucosyltransferase
OS=Neurospora crassa GN=atg-26 PE=3 SV=1
Length = 1553

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1

Query: 264 PSAIANDFTKPFGRQIVMRHLACLPQIKATTMFLIFDKVPLTPTADEMPSHANERRKEG 88
P+ +A F P G + R+ +K+ + ++F+K P + T D PS+ + RR G
Sbjct: 151 PNHMAMTFAGP-GIKGTARNRETAGTVKSLSQTVVFNKPPASATVDAGPSNIHRRRLPG 208


>sp|Q49823|Y2424_MYCLE Uncharacterized protein ML2424
OS=Mycobacterium leprae GN=ML2424 PE=3 SV=1
Length = 300

Score = 28.9 bits (63), Expect = 8.5
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2

Query: 122 ISSAVGVNGTLSKMRNIVVALICGRQAKCLITICLPNGLVKSLAIADGLHGARCSLY 292
I+ +G+ G L + V + GR L+ V+SLAI +GL+ RC+ Y
Sbjct: 173 IARRLGLTGALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAY 229


tr_hit_id A9S939
Definition tr|A9S939|A9S939_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 49
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918389|Adiantum capillus-veneris mRNA, clone:
YMU001_000112_H10.
(297 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S939|A9S939_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.1
tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g2584... 33 7.0
tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana ... 33 7.0
tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein At4g2584... 33 7.0
tr|A7SGS2|A7SGS2_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 7.0

>tr|A9S939|A9S939_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163550 PE=4 SV=1
Length = 467

Score = 33.9 bits (76), Expect = 4.1
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2

Query: 65 VFAISN-TIPSFLLSLACEGISSAVGVNGTLSKMRNIVVALICGRQAKC 208
V++I N TI S L L G+SS+ VNG LS +R + I GR ++C
Sbjct: 70 VYSIENVTIESCRLLLRIRGLSSSGKVNGVLSLLRKGIGGGISGRHSEC 118


>tr|Q9SW01|Q9SW01_ARATH Putative uncharacterized protein AT4g25840
OS=Arabidopsis thaliana GN=AT4g25840 PE=2 SV=1
Length = 221

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1

Query: 144 LTPTADEMPSHANERRK---EGMVFDIANTTNTKHGQ*RTQRQHVLLSLLH 1
L PT+D MP + R +G+ IA T+T+H +TQR L SL+H
Sbjct: 73 LFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELFSLMH 123


>tr|Q8L8P9|Q8L8P9_ARATH GS1-like protein OS=Arabidopsis thaliana
PE=2 SV=1
Length = 298

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1

Query: 144 LTPTADEMPSHANERRK---EGMVFDIANTTNTKHGQ*RTQRQHVLLSLLH 1
L PT+D MP + R +G+ IA T+T+H +TQR L SL+H
Sbjct: 150 LFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELFSLMH 200


>tr|Q8GW23|Q8GW23_ARATH Putative uncharacterized protein
At4g25840/F14M19_120 (At4g25840) OS=Arabidopsis thaliana
GN=At4g25840/F14M19_120 PE=2 SV=1
Length = 249

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1

Query: 144 LTPTADEMPSHANERRK---EGMVFDIANTTNTKHGQ*RTQRQHVLLSLLH 1
L PT+D MP + R +G+ IA T+T+H +TQR L SL+H
Sbjct: 101 LFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELFSLMH 151


>tr|A7SGS2|A7SGS2_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g117722 PE=3 SV=1
Length = 249

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2

Query: 2 WSKLNNTCCL*VLHWPCFVFVVFAISNTIPSFLLSLACEGISSAVGVNGTLS 157
W + T C+ +LHWP ++F I +P ++ GI V LS
Sbjct: 125 WGYASGTGCIVLLHWPWRFLLIFIIGFLVPLIIMVFCYAGILVVVSSKARLS 176