BP918396
Clone id YMU001_000113_A07
Library
Length 400
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATCAGACCATTAAAAAACTTTTACCATTGTTTATGGGCATACGATTTCTGGACCATCCC
AATTCTTTAAGCTTGTGACTGGTTCTTGGCATAACTTGGGCCAGTGGCCATACCAGTAGC
ATGTACAACATCTCTTGCCACGAAGTTTATGACTTCTTGAACTTCATTGTCACACTCAGT
GCAGACCCAGAAAATCGTCTTTACTCTTGGCCTCTGCATACGCAGTTGATTGCATCGCCA
CTAATCCCTGCATACCCTTCTACTAATGCTCCCAGATTGTTGACAAGAAAATAGGCAACT
TTTGCCAGGGAGACGACAATTTGTCTATAACTGTCAATGTTACACTATCCCACGTACCCT
TGCCCAAATAACTCCAAATATGAATATGCACTGAATACTG
■■Homology search results ■■ -
sp_hit_id Q09GJ8
Definition sp|Q09GJ8|CLECA_PHIOL C-type lectin subunit A OS=Philodryas olfersii
Align length 37
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918396|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A07.
(400 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09GJ8|CLECA_PHIOL C-type lectin subunit A OS=Philodryas olfe... 31 2.2

>sp|Q09GJ8|CLECA_PHIOL C-type lectin subunit A OS=Philodryas
olfersii PE=2 SV=1
Length = 160

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1

Query: 145 LRGKR-CCTCYWYGHWPKLCQEPVTSLKNWDGPEIVC 38
LRG CC C W + K C + KNWD E C
Sbjct: 18 LRGSEACCPCGW-SSYDKYCYKVFDKRKNWDDAERFC 53


tr_hit_id Q9CP47
Definition tr|Q9CP47|Q9CP47_PASMU Putative uncharacterized protein PM0213 OS=Pasteurella multocida
Align length 54
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918396|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A07.
(400 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9CP47|Q9CP47_PASMU Putative uncharacterized protein PM0213 O... 35 2.4
tr|B1EFD5|B1EFD5_9ESCH Putative uncharacterized protein OS=Esche... 33 7.0

>tr|Q9CP47|Q9CP47_PASMU Putative uncharacterized protein PM0213
OS=Pasteurella multocida GN=PM0213 PE=4 SV=1
Length = 149

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1

Query: 19 LLPLFMGIRFLDHPNSLSL*LVLGITWASGHTSSMYNISCHEVYDF-LNFIVTL 177
LLP F+ + F ++LSL ++ + W S H + YN+ C+ Y L +IVTL
Sbjct: 71 LLPFFLILGFFTRCSALSLTILTAVAWYSVHAGAGYNV-CNNGYKMALIYIVTL 123


>tr|B1EFD5|B1EFD5_9ESCH Putative uncharacterized protein
OS=Escherichia albertii TW07627 GN=ESCAB7627_0651 PE=4
SV=1
Length = 273

Score = 33.1 bits (74), Expect = 7.0
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -3

Query: 200 RRFSGSALSVTMKFKKS*TSWQEM----LYMLLVWPLAQVMPRTSHKLKELGWSRNRMPI 33
+R+ VT+K +KS +SW E LY L W H LK+LG NR+ I
Sbjct: 190 QRYMKEVFDVTLKIQKSFSSWDEFNKSYLYGYLWWSGED----QQHDLKKLGCYHNRIMI 245

Query: 32 NNGKSFL 12
N + ++
Sbjct: 246 INKQQYV 252