BP918399
Clone id YMU001_000113_A10
Library
Length 464
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTGGAAGAATTCGCGGAAAACTATACGAGACATACGAAATAACTAATATACGAAACGA
AAGCGACCAATGAAAATACGTCAGTTTCTTACTCATGTAAATAAACTATTTCTTAGCGAC
GGCGACAACTTTTCTAAAGCCTTATTCGGTTATGGTCGATCAATCGGGTGAGAGTTCCCT
GCCTGACCGCCGATTCAGAACCGCCCGTGACAGTTTCCTGTCATACGGCTCCCCGCATCC
CATCAGGTAGGGGTTCTGGAATGCAAGCTCCCCTGCCCTCTTCCGATCGTAACAATGCCC
ATATAGCAACTGTCGCAGGTACTATTAGCAGCTCATGCCTCCCAAACAACGTAAAATGAT
GCAATCTCTTTTTACTTATAATGTCCACAGGCAAGAAAAACACACACACAAAAAACACCT
ACGCCGGCCGCGGGTTCTACTTTCTTGTCGCTTTAGCCTTATCG
■■Homology search results ■■ -
sp_hit_id Q07990
Definition sp|Q07990|YL042_YEAST Cell wall protein YLR042C OS=Saccharomyces cerevisiae
Align length 73
Score (bit) 32.7
E-value 0.71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918399|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A10.
(446 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q07990|YL042_YEAST Cell wall protein YLR042C OS=Saccharomyces... 33 0.71
sp|P16766|UL35_HCMVA Protein UL35 OS=Human cytomegalovirus (stra... 26 2.6
sp|P05716|RT14_VICFA Ribosomal protein S14, mitochondrial OS=Vic... 31 2.7
sp|P26873|RT14_MARPO Ribosomal protein S14, mitochondrial OS=Mar... 30 3.5
sp|P31362|PO2F3_MOUSE POU domain, class 2, transcription factor ... 30 6.0
sp|Q8TFG4|YL54_SCHPO Uncharacterized protein PB18E9.04c OS=Schiz... 29 7.8
sp|P58813|APGM_METKA 2,3-bisphosphoglycerate-independent phospho... 29 7.8

>sp|Q07990|YL042_YEAST Cell wall protein YLR042C OS=Saccharomyces
cerevisiae GN=YLR042C PE=1 SV=1
Length = 161

Score = 32.7 bits (73), Expect = 0.71
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3

Query: 168 TADSEPPVTVSCHTAPRIPSGRGSGMQ--APLPSSDRNNAHIATVAGTISSSCLP---NN 332
++ S P VT S T+ S + + PLPSS RN + TISSS +
Sbjct: 83 SSSSIPKVTSSVITSINYQSSNSTVVTQFTPLPSSSRNETKSSQTTNTISSSTSTGGVGS 142

Query: 333 VK*CNLFLLIMST 371
VK C F+L++ T
Sbjct: 143 VKPCLYFVLMLET 155


>sp|P16766|UL35_HCMVA Protein UL35 OS=Human cytomegalovirus (strain
AD169) GN=UL35 PE=3 SV=1
Length = 640

Score = 25.8 bits (55), Expect(2) = 2.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2

Query: 320 PPKQRKMMQSLFTYNVHRQEKHTHKKHLRR 409
PP+QR+ M S+ ++ + H++H RR
Sbjct: 567 PPRQRRRMVSVTLFSPYSVAYSHHRRHRRR 596



Score = 23.5 bits (49), Expect(2) = 2.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3

Query: 219 IPSGRGSGMQAPLPSSDRNNAHIATVAGTISSSCL 323
+PS R S + P+S +A ++ G + SS L
Sbjct: 519 LPSARSSSTRTTTPASTYTSAGTSSTTGLLLSSSL 553


>sp|P05716|RT14_VICFA Ribosomal protein S14, mitochondrial OS=Vicia
faba GN=RPS14 PE=3 SV=2
Length = 100

Score = 30.8 bits (68), Expect = 2.7
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = -1

Query: 128 NKALEKLSPSLRNSLFT*VRNXXXXXXXXXFVY*LFRMSRIV 3
+K KLS RNS F VRN VY LFR+SRIV
Sbjct: 41 DKLRYKLSKLPRNSSFARVRNRCISTGRPRSVYELFRISRIV 82


>sp|P26873|RT14_MARPO Ribosomal protein S14, mitochondrial
OS=Marchantia polymorpha GN=RPS14 PE=3 SV=2
Length = 99

Score = 30.4 bits (67), Expect = 3.5
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -1

Query: 143 DRP*PNKA----LEKLSPSLRNSLFT*VRNXXXXXXXXXFVY*LFRMSRIV 3
DR PNK KLS RNS T VRN VY LFR+SRIV
Sbjct: 31 DRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFTGRPRSVYKLFRISRIV 81


>sp|P31362|PO2F3_MOUSE POU domain, class 2, transcription factor 3
OS=Mus musculus GN=Pou2f3 PE=2 SV=2
Length = 431

Score = 29.6 bits (65), Expect = 6.0
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3

Query: 138 SINRVRVPCLTADSEPPVTVSCHTAPRI-PSGRGSGMQAPLPSSDRNNAHIATVAGTISS 314
S+ + VP + + VT SC PS GSG+ A P++ +NN+ A + + SS
Sbjct: 355 SLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAMNSSSSSS 414


>sp|Q8TFG4|YL54_SCHPO Uncharacterized protein PB18E9.04c
OS=Schizosaccharomyces pombe GN=SPAPB18E9.04c PE=2 SV=1
Length = 800

Score = 29.3 bits (64), Expect = 7.8
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Frame = +3

Query: 183 PPVTVSCHTAPRIPSGRGSGMQAPL----PSSDRNNAHI-----ATVAGTISSSCLPNNV 335
P + SC T+ IP+G S + P+ P + ++ I +T + +SS LP
Sbjct: 223 PTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTS 282

Query: 336 K*CNLFLLIMSTGKKNT 386
C I TG T
Sbjct: 283 TSCTTSTSIPPTGNSTT 299


>sp|P58813|APGM_METKA 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase OS=Methanopyrus kandleri GN=apgM
PE=3 SV=1
Length = 422

Score = 29.3 bits (64), Expect = 7.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3

Query: 156 VPCLTADSEPPVTVSCHTAPRIP 224
V CLTAD PV V HTA +P
Sbjct: 350 VVCLTADHSTPVAVGDHTADPVP 372


tr_hit_id A8XCI6
Definition tr|A8XCI6|A8XCI6_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae
Align length 68
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918399|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A10.
(446 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8XCI6|A8XCI6_CAEBR Putative uncharacterized protein OS=Caeno... 38 0.22
tr|Q5MA47|Q5MA47_TOBAC Putative uncharacterized protein orf121a ... 38 0.28
tr|B6K9I4|B6K9I4_TOXGO Putative uncharacterized protein OS=Toxop... 28 0.53
tr|B0XDT1|B0XDT1_CULQU Dynamnin-like protein OS=Culex quinquefas... 33 5.3
tr|A1DBC4|A1DBC4_NEOFI Peroxisomal membrane protein (Pex13), put... 33 7.0
tr|B5VMX5|B5VMX5_YEAS6 YLR042Cp-like protein OS=Saccharomyces ce... 33 9.1
tr|B3LT13|B3LT13_YEAS1 Putative uncharacterized protein OS=Sacch... 33 9.1
tr|A7A0U7|A7A0U7_YEAS7 Conserved protein OS=Saccharomyces cerevi... 33 9.1

>tr|A8XCI6|A8XCI6_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG11242 PE=4 SV=1
Length = 2482

Score = 38.1 bits (87), Expect = 0.22
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +3

Query: 138 SINRVRVPCLTADSEPPVTVSCHTAPRIPSGRGSGMQAPLPSSDRNNAHIATVAGTIS-- 311
S + V P +T+ S P + S T P P G + Q+P PSS + +TV + S
Sbjct: 1194 SFSTVSTPSMTSGSTPGASSSLSTQPSTPGGSTASSQSPGPSSSSPSPQTSTVRASTSSP 1253

Query: 312 ---SSCLP 326
SSC P
Sbjct: 1254 SQQSSCSP 1261


>tr|Q5MA47|Q5MA47_TOBAC Putative uncharacterized protein orf121a
OS=Nicotiana tabacum GN=orf121a PE=4 SV=1
Length = 121

Score = 37.7 bits (86), Expect = 0.28
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3

Query: 27 LIYETKATNENTSVSYSCK*TIS*RRRQL 113
LIY T+AT NTSVSYSCK T+S + QL
Sbjct: 20 LIYRTRATRVNTSVSYSCKGTLSWQLGQL 48


>tr|B6K9I4|B6K9I4_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_115290 PE=4 SV=1
Length = 1174

Score = 28.1 bits (61), Expect(2) = 0.53
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2

Query: 311 QLMPPKQRKMMQSLFTYNVHRQEKHTHKKHLRRPRVLLSCRFSL 442
Q P ++ S + R+++ + K H RPR LLSC SL
Sbjct: 84 QATPSDIAALLSSTGKERMRRRKRDSEKPHDSRPRDLLSCSASL 127



Score = 27.7 bits (60), Expect(2) = 0.53
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3

Query: 150 VRVPCLTADSEPPVTVSCHTAPRIPSGRGS---GMQAPLPS 263
V PC +ADS P + S A +PS + S +++PLPS
Sbjct: 23 VSSPCRSADSSPICSFSSSRASCLPSEQDSHEEPLESPLPS 63


>tr|B0XDT1|B0XDT1_CULQU Dynamnin-like protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ017686 PE=4 SV=1
Length = 138

Score = 33.5 bits (75), Expect = 5.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3

Query: 138 SINRVRVPCLTADSEPPVTVSCHTAPRIPSGRGSGMQAPLP 260
S+ + VP ++ PP S AP IPS G G PLP
Sbjct: 76 SLGSMGVPAISGRGPPPAPSSARPAPAIPSRPGGGNVPPLP 116


>tr|A1DBC4|A1DBC4_NEOFI Peroxisomal membrane protein (Pex13),
putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=NFIA_097930 PE=4 SV=1
Length = 465

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -2

Query: 283 WALLRSEEGRGACIPEPLPDGMRGAV*QETVTGGSESAVRQGTLTRLID 137
W R+ +GR +P P + ++ Q+ +T GSE+ R T+T +I+
Sbjct: 386 WWRCRARDGRVGYLPGPYLETIQRRPAQQAITSGSEAGSRSNTMTSVIE 434


>tr|B5VMX5|B5VMX5_YEAS6 YLR042Cp-like protein OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=AWRI1631_120870 PE=4
SV=1
Length = 161

Score = 32.7 bits (73), Expect = 9.1
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3

Query: 168 TADSEPPVTVSCHTAPRIPSGRGSGMQ--APLPSSDRNNAHIATVAGTISSSCLP---NN 332
++ S P VT S T+ S + + PLPSS RN + TISSS +
Sbjct: 83 SSSSIPKVTSSVITSINYQSSNSTVVTQFTPLPSSSRNETKSSQTTNTISSSTSTGGVGS 142

Query: 333 VK*CNLFLLIMST 371
VK C F+L++ T
Sbjct: 143 VKPCLYFVLMLET 155


>tr|B3LT13|B3LT13_YEAS1 Putative uncharacterized protein
OS=Saccharomyces cerevisiae (strain RM11-1a)
GN=SCRG_05028 PE=4 SV=1
Length = 161

Score = 32.7 bits (73), Expect = 9.1
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3

Query: 168 TADSEPPVTVSCHTAPRIPSGRGSGMQ--APLPSSDRNNAHIATVAGTISSSCLP---NN 332
++ S P VT S T+ S + + PLPSS RN + TISSS +
Sbjct: 83 SSSSIPKVTSSVITSINYQSSNSTVVTQFTPLPSSSRNETKSSQTTNTISSSTSTGGVGS 142

Query: 333 VK*CNLFLLIMST 371
VK C F+L++ T
Sbjct: 143 VKPCLYFVLMLET 155


>tr|A7A0U7|A7A0U7_YEAS7 Conserved protein OS=Saccharomyces
cerevisiae (strain YJM789) GN=SCY_3621 PE=4 SV=1
Length = 161

Score = 32.7 bits (73), Expect = 9.1
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3

Query: 168 TADSEPPVTVSCHTAPRIPSGRGSGMQ--APLPSSDRNNAHIATVAGTISSSCLP---NN 332
++ S P VT S T+ S + + PLPSS RN + TISSS +
Sbjct: 83 SSSSIPKVTSSVITSINYQSSNSTVVTQFTPLPSSSRNETKSSQTTNTISSSTSTGGVGS 142

Query: 333 VK*CNLFLLIMST 371
VK C F+L++ T
Sbjct: 143 VKPCLYFVLMLET 155