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NBDC - LSDB Archive
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BP918400
Clone id YMU001_000113_A11
Library
Length 368
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTTTTCAATAACAGGTTCGTCAATGTTCTCCCAAGTGCACTCATCATAAGGTAGACCACA
CCACTTGACCAATACTTCATGAGCATCAGTCAGTTCCTGGCGCTTTGCTACAATGCGCTG
TGGCTTGCACCACATTTCATTAACTAGATTTATACAAGCATTTCTGTACTTAAATCTGTA
GTTATCAAGTTTCCGCTTCGCGAGTGCTTTCAACTCTGTTCCTTTCACCCATTGGTCGTG
AATATGCGACTTGCCAACCCACTTCACTAGAAATTCATACAACAGAGGCGGCTTGTCGTC
ATTAGCATCCAGATCCTTCTGAGCCTCACTTATTTCATCGTTTTCACGTCCAACCATAGT
GTGAGCTT
■■Homology search results ■■ -
sp_hit_id Q9US25
Definition sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe
Align length 131
Score (bit) 62.8
E-value 5.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918400|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A11.
         (368 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar...    63   5e-10
sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1...    54   2e-07
sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1...    53   4e-07
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE...    50   3e-06
sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch...    49   1e-05
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar...    47   3e-05
sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7...    47   4e-05
sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2...    46   5e-05
sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7...    46   7e-05
sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7...    46   7e-05
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5...    45   1e-04
sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6...    45   1e-04
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3...    43   4e-04
sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8...    40   0.003
sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9...    40   0.005
sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9...    39   0.008
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4...    37   0.023
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4...    37   0.023
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M...    35   0.089
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3...    35   0.12 
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3...    33   0.58 
sp|Q9P793|MIT1_SCHPO Chromatin remodeling factor mit1 OS=Schizos...    31   2.2  
sp|A7M9B2|YCF1_CUSRE Putative membrane protein ycf1 OS=Cuscuta r...    30   2.9  
sp|Q54F49|GERL3_DICDI Uncharacterized gerABC family protein DDB_...    30   2.9  
sp|Q6ZPJ0|TEX2_MOUSE Testis-expressed sequence 2 protein OS=Mus ...    30   3.7  
sp|A1W446|HIS2_ACISJ Phosphoribosyl-ATP pyrophosphatase OS=Acido...    30   3.7  
sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petun...    29   6.4  
sp|Q9LTV2|FBD8_ARATH Putative FBD-associated F-box protein At3g1...    29   8.3  
sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapien...    29   8.3  

>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1
           OS=Schizosaccharomyces pombe GN=hrp1 PE=1 SV=1
          Length = 1373

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
 Frame = -3

Query: 339 DEISEAQKDLDANDDKPPLLYEFLVKWVGKSHIHDQWVKGTELKAL-AKRKLDNY----- 178
           D +   +K  DA DD P   Y++L+KW   SH+H+ W   + L ++   +K+DNY     
Sbjct: 210 DFVLNHRKRADAQDDDPKSSYQYLIKWQEVSHLHNTWEDYSTLSSVRGYKKVDNYIKQNI 269

Query: 177 ------------------RFKYRNACINLVNEMWCKPQRIVAKRQELTDAHEVLVKWCGL 52
                                      N++ E +   +RIVA         E  VKW  L
Sbjct: 270 IYDREIREDPTTTFEDIEALDIERERKNMLFEEYKIVERIVASETNEEGKTEYFVKWRQL 329

Query: 51  PYDECTWENID 19
           PYD CTWE+ D
Sbjct: 330 PYDNCTWEDAD 340


>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1
           OS=Homo sapiens GN=CHD1 PE=1 SV=1
          Length = 1709

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 27/128 (21%)
 Frame = -3

Query: 327 EAQKDLDAN--DDKPPLLYEFLVKWVGKSHIHDQWVKGTELK---ALAKRKLDNYRFK-- 169
           EA  D +A    +K P   ++L+KW G SHIH+ W     LK       +KLDNY+ K  
Sbjct: 298 EADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQ 357

Query: 168 ---------------YRNACINLVNEMWCKPQ---RIVAKRQELTDA--HEVLVKWCGLP 49
                          Y N    L +++  + Q   RI+A   + + A   +   KW GLP
Sbjct: 358 ETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVGRIIAHSNQKSAAGYPDYYCKWQGLP 417

Query: 48  YDECTWEN 25
           Y EC+WE+
Sbjct: 418 YSECSWED 425


>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1
           OS=Mus musculus GN=Chd1 PE=1 SV=2
          Length = 1711

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
 Frame = -3

Query: 297 DKPPLLYEFLVKWVGKSHIHDQWVKGTELK---ALAKRKLDNYRFK-------------- 169
           +K P   ++L+KW G SHIH+ W     LK       +KLDNY+ K              
Sbjct: 308 NKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPE 367

Query: 168 ---YRNACINLVNEMWCKPQ---RIVAKRQELTDA--HEVLVKWCGLPYDECTWEN 25
              Y N    L +++  + Q   RI+A   + + A   +   KW GLPY EC+WE+
Sbjct: 368 DVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWED 423


>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE
           OS=Arabidopsis thaliana GN=PKL PE=1 SV=1
          Length = 1384

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
 Frame = -3

Query: 330 SEAQKDLDANDDKPPLLYEFLVKWVGKSHIHDQWVKGTELKAL------AKRKLDNYR-- 175
           S  Q   DA + KP  + ++LVKW G S++H  WV   E +         K +++N+   
Sbjct: 113 SSEQGSSDA-EPKPIFVKQYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQ 171

Query: 174 ---FKYRNACINLVNEMWCKPQRIVAKRQELTDAHEVLVKWCGLPYDECTWEN 25
              F         +   W    RI+A R+E  +  E LVK+  L YDEC WE+
Sbjct: 172 MESFNNSEDDFVAIRPEWTTVDRILACREEDGEL-EYLVKYKELSYDECYWES 223


>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1
           OS=Saccharomyces cerevisiae GN=CHD1 PE=1 SV=1
          Length = 1468

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
 Frame = -3

Query: 279 YEFLVKWVGKSHIHDQWVKGTEL-KALAKRKLDNY--RFKYRNACINL------------ 145
           YEFL+KW  +SH+H+ W     + +    ++LDNY  +F   +  + L            
Sbjct: 211 YEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIM 270

Query: 144 ---------VNEMWCKPQRIV----AKRQELTDAHEVLVKWCGLPYDECTWENIDEPV 10
                      E +  P+RI+    A  ++ T   + LVKW  L YDE TWEN  + V
Sbjct: 271 DMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIV 328


>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3
           OS=Schizosaccharomyces pombe GN=hrp3 PE=1 SV=1
          Length = 1388

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
 Frame = -3

Query: 279 YEFLVKWVGKSHIHDQWVKGTELKAL-AKRKLDNYRFKY-------------RNACINLV 142
           YEFL+KWV  SH+H  W     +  +   +K+DN+  +                  I  +
Sbjct: 214 YEFLIKWVNFSHLHCTWEPYNNISMIRGSKKVDNHIKQVILLDREIREDPTTTREDIEAM 273

Query: 141 N----------EMWCKPQRIVAKRQELTDAHEVLVKWCGLPYDECTWE--NIDEPV 10
           +          E + +  RIVAK      + E LVKW  L YD CTWE  +I EP+
Sbjct: 274 DIEKERKRENYEEYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWEASSIIEPI 329


>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7
            OS=Mus musculus GN=Chd7 PE=2 SV=1
          Length = 2986

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
 Frame = -3

Query: 276  EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEM--------WCKP 121
            EF VK+   S++H QW    +L+   + +    RFK +      ++E+        + + 
Sbjct: 815  EFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEV 874

Query: 120  QRIVAKRQELTDAHE----VLVKWCGLPYDECTWE---NIDEPVIE 4
             RI+   +   D  E     LVKWC LPY++ TWE   +ID+  IE
Sbjct: 875  DRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDIDQTKIE 920


>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2
           OS=Homo sapiens GN=CHD2 PE=1 SV=2
          Length = 1828

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 40/143 (27%)
 Frame = -3

Query: 315 DLDANDDKPPLLYEFLVKWVGKSHIHDQWVKGTEL---KALAKRKLDNYR---------- 175
           D D   D+  + Y  L+KW G S+IH  W     L   K    +KL+N++          
Sbjct: 295 DFDTEKDEGEIQY--LIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL 352

Query: 174 ----------FKYRNACINLVNEMWCKPQRIVAKRQELTD-------AH----------E 76
                     F  +    + +N+ +   +R++A +   +        AH          E
Sbjct: 353 GKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPE 412

Query: 75  VLVKWCGLPYDECTWENIDEPVI 7
            L KW GLPY EC+WE  DE +I
Sbjct: 413 YLCKWMGLPYSECSWE--DEALI 433


>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7
            OS=Homo sapiens GN=CHD7 PE=1 SV=3
          Length = 2997

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
 Frame = -3

Query: 276  EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEM--------WCKP 121
            EF VK+   S++H QW    +L+   + +    RFK +      ++E+        + + 
Sbjct: 825  EFYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEV 884

Query: 120  QRIVAKRQELTDAHE----VLVKWCGLPYDECTWE---NIDEPVIE 4
             RI+   +   D  E     LVKWC LPY++ TWE   +ID+  IE
Sbjct: 885  DRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIE 930


>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7
            OS=Gallus gallus GN=CHD7 PE=2 SV=1
          Length = 3011

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
 Frame = -3

Query: 276  EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEM--------WCKP 121
            EF VK+   S++H QW    EL    + +    RFK +      ++E+        + + 
Sbjct: 826  EFYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEI 885

Query: 120  QRIVAKRQELTDAHE----VLVKWCGLPYDECTWE---NIDEPVIE 4
             RI+   +   D  E     LVKWC LPY++ TWE   +ID+  IE
Sbjct: 886  DRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIE 931
tr_hit_id B8B6D8
Definition tr|B8B6D8|B8B6D8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 91
Score (bit) 137.0
E-value 3.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918400|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_A11.
         (368 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8B6D8|B8B6D8_ORYSI Putative uncharacterized protein OS=Oryza...   137   3e-31
tr|A7P2P8|A7P2P8_VITVI Chromosome chr1 scaffold_5, whole genome ...   123   5e-27
tr|O48579|O48579_ARATH Mi-2 autoantigen-like protein (Helicase-l...   119   1e-25
tr|A3BK09|A3BK09_ORYSJ Putative uncharacterized protein OS=Oryza...    97   3e-19
tr|A9S4A6|A9S4A6_PHYPA SNF2 family DNA-dependent ATPase (Fragmen...    96   9e-19
tr|A9TG47|A9TG47_PHYPA SNF2 family DNA-dependent ATPase OS=Physc...    96   1e-18
tr|A8IVE5|A8IVE5_CHLRE SNF2 family chromodomain-helicase OS=Chla...    84   5e-15
tr|Q012A3|Q012A3_OSTTA Chromodomain helicase DNA binding protein...    69   9e-11
tr|A8PK99|A8PK99_BRUMA Type III restriction enzyme, res subunit ...    63   6e-09
tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza...    63   8e-09
tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza...    63   8e-09
tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza...    63   8e-09
tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ...    63   8e-09
tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza...    63   8e-09
tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza...    63   8e-09
tr|A2EGL7|A2EGL7_TRIVA SNF2 family N-terminal domain containing ...    62   1e-08
tr|A2FI37|A2FI37_TRIVA SNF2 family N-terminal domain containing ...    58   2e-07
tr|O61845|O61845_CAEEL Temporarily assigned gene name protein 19...    57   4e-07
tr|A4RMS0|A4RMS0_MAGGR Putative uncharacterized protein OS=Magna...    57   5e-07
tr|Q2U2M2|Q2U2M2_ASPOR Chromodomain-helicase DNA-binding protein...    57   6e-07
tr|B8NIR4|B8NIR4_ASPFL Chromodomain helicase (Chd1), putative OS...    57   6e-07
tr|Q2HG50|Q2HG50_CHAGB Putative uncharacterized protein OS=Chaet...    56   1e-06
tr|O17909|O17909_CAEEL Protein H06O01.2, partially confirmed by ...    55   1e-06
tr|B4KHL3|B4KHL3_DROMO GI10771 OS=Drosophila mojavensis GN=GI107...    55   2e-06
tr|Q800S6|Q800S6_TAEGU Chromo-helicase DNA-binding protein OS=Ta...    55   2e-06
tr|B2AYT1|B2AYT1_PODAN Predicted CDS Pa_1_12130 OS=Podospora ans...    55   2e-06
tr|Q1LVN0|Q1LVN0_DANRE Novel protein similar to human chromodoma...    54   3e-06
tr|B5RHT6|B5RHT6_MUSBA Uncharacterized protein OS=Musa balbisian...    54   3e-06
tr|B3MMA3|B3MMA3_DROAN GF14337 OS=Drosophila ananassae GN=GF1433...    54   4e-06
tr|Q17RZ3|Q17RZ3_HUMAN Chromodomain helicase DNA binding protein...    54   4e-06

>tr|B8B6D8|B8B6D8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26092 PE=4 SV=1
          Length = 2275

 Score =  137 bits (344), Expect = 3e-31
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = -3

Query: 279 YEFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKR 100
           YEFLVKWVGKS+IH+ W+  +ELKALAKRKL+NY+ KY    IN+  E WC+PQR++A R
Sbjct: 550 YEFLVKWVGKSNIHNSWISESELKALAKRKLENYKAKYGTGLINICKEQWCQPQRVIALR 609

Query: 99  QELTDAHEVLVKWCGLPYDECTWENIDEPVI 7
             L +  E L+KWC LPYDECTWE +DEP +
Sbjct: 610 TSLDEIEEALIKWCALPYDECTWERLDEPTM 640


>tr|A7P2P8|A7P2P8_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030136001
           PE=4 SV=1
          Length = 836

 Score =  123 bits (308), Expect = 5e-27
 Identities = 59/118 (50%), Positives = 76/118 (64%)
 Frame = -3

Query: 357 MVGRENDEISEAQKDLDANDDKPPLLYEFLVKWVGKSHIHDQWVKGTELKALAKRKLDNY 178
           M G   + + +A     A+ D   + YEFLVKWVGKSHIH+ W+  ++LK LAKRKL+NY
Sbjct: 141 MGGGAENTVQDATLAESASFDGEMVSYEFLVKWVGKSHIHNSWISESQLKLLAKRKLENY 200

Query: 177 RFKYRNACINLVNEMWCKPQRIVAKRQELTDAHEVLVKWCGLPYDECTWENIDEPVIE 4
           + KY  A IN+  E W +PQR++A            VKW GLPYDECTWE +DEPV+E
Sbjct: 201 KAKYGMAVINICEEQWKQPQRVIAL---------PFVKWNGLPYDECTWERLDEPVVE 249


>tr|O48579|O48579_ARATH Mi-2 autoantigen-like protein (Helicase-like
           protein) OS=Arabidopsis thaliana GN=At5g44800 PE=4 SV=1
          Length = 2228

 Score =  119 bits (297), Expect = 1e-25
 Identities = 52/93 (55%), Positives = 67/93 (72%)
 Frame = -3

Query: 279 YEFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKR 100
           YEFLVKWV KS+IH+ W+   ELK LAKRKL+NY+ KY  A IN+  + W +PQRIVA R
Sbjct: 537 YEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKAKYGTAVINICEDKWKQPQRIVALR 596

Query: 99  QELTDAHEVLVKWCGLPYDECTWENIDEPVIEN 1
                  E  VKW GL YDECTWE+++EP++++
Sbjct: 597 VSKEGNQEAYVKWTGLAYDECTWESLEEPILKH 629


>tr|A3BK09|A3BK09_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023381 PE=4 SV=1
          Length = 2192

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 45/91 (49%), Positives = 55/91 (60%)
 Frame = -3

Query: 279 YEFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKR 100
           YEFLVKWVGKS+IH+ W+  +ELKALAKRKL+NY+ KY                      
Sbjct: 490 YEFLVKWVGKSNIHNSWISESELKALAKRKLENYKAKYGT-------------------- 529

Query: 99  QELTDAHEVLVKWCGLPYDECTWENIDEPVI 7
               +  E L+KWC LPYDECTWE +DEP +
Sbjct: 530 ---DEIEEALIKWCALPYDECTWERLDEPTM 557


>tr|A9S4A6|A9S4A6_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
           OS=Physcomitrella patens subsp. patens GN=CHR1514 PE=4
           SV=1
          Length = 598

 Score = 95.9 bits (237), Expect = 9e-19
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = -3

Query: 276 EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKRQ 97
           EFLVKW G+SHIH++WV    L+ +AKRKL+ +  K   A   +++E   KPQR++A++ 
Sbjct: 99  EFLVKWRGRSHIHNEWVSEKRLQIIAKRKLERFTTKNGRAPQIILDEQCLKPQRVLARKS 158

Query: 96  ELTDAHEVLVKWCGLPYDECTWENIDEPVI 7
                 EVLVKW  +PYDECTWE    PVI
Sbjct: 159 GKNGCSEVLVKWHSVPYDECTWEKEKHPVI 188


>tr|A9TG47|A9TG47_PHYPA SNF2 family DNA-dependent ATPase
           OS=Physcomitrella patens subsp. patens GN=CHR1503 PE=4
           SV=1
          Length = 775

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = -3

Query: 276 EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKRQ 97
           EFLVKW  +SHIH++WV    L+ +AKRKL+ Y+ KY    + L+++   KPQRI+A R 
Sbjct: 80  EFLVKWRDRSHIHNEWVSEERLRTIAKRKLEKYKLKYGTDPLILMDDECLKPQRILATRV 139

Query: 96  ELTDAHEVLVKWCGLPYDECTWENIDEPVI 7
               + EVLVKW   PYD CTWE+   PV+
Sbjct: 140 GKNGSAEVLVKWHSQPYDACTWEDKGHPVV 169


>tr|A8IVE5|A8IVE5_CHLRE SNF2 family chromodomain-helicase
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_13217 PE=4
           SV=1
          Length = 3365

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -3

Query: 276 EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKYRNACINLVNEMWCKPQRIVAKRQ 97
           E+LVKW  +SHIH++W+K + L  LA+RKL N++ +  +   N V+E W KP+R V++R 
Sbjct: 736 EYLVKWAHRSHIHNEWIKESVLMGLARRKLLNFKKRNGDKPCNSVDERWTKPERFVSRRP 795

Query: 96  ELT-DAHEVLVKWCGLPYDECTWE 28
             T    EVL+KW  L Y++ TWE
Sbjct: 796 SPTGPGWEVLIKWTALGYEQATWE 819


>tr|Q012A3|Q012A3_OSTTA Chromodomain helicase DNA binding
           protein-like protein (ISS) OS=Ostreococcus tauri
           GN=Ot09g01180 PE=4 SV=1
          Length = 519

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -3

Query: 276 EFLVKWVGKSHIHDQWVKGTELKALAKRKLDNYRFKY--RNACINLVNEMWCKPQRIVAK 103
           E++V+W GK+HI + WV+G +L++     + ++  +Y  RN  + LV   W  PQR+V  
Sbjct: 80  EYIVRWEGKAHIANTWVRGEQLRSTHPELVADFDAEYADRNDVV-LVKRDWLIPQRVV-N 137

Query: 102 RQELTDAHEVLVKWCGLPYDECTWENID 19
              +  + ++LVKW GLPY +CTWE +D
Sbjct: 138 VTGIPPSTQLLVKWWGLPYVDCTWEKLD 165


>tr|A8PK99|A8PK99_BRUMA Type III restriction enzyme, res subunit
           family protein OS=Brugia malayi GN=Bm1_28925 PE=4 SV=1
          Length = 1595

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
 Frame = -3

Query: 312 LDANDDKPPLLYEFLVKWVGKSHIHDQWVKGTELK---ALAKRKLDNYRFKYRNA----- 157
           L  N  +  L  ++L+KW+G SH+H+ W     LK   A   +K+DNY  + R+      
Sbjct: 276 LAENGTELELERQYLIKWLGWSHLHNTWESENSLKLCNAKGLKKIDNYMKRLRDIEEWKL 335

Query: 156 ---------------CINLVNEMWCKPQRIVA----KRQELTDAHEVLVKWCGLPYDECT 34
                            + +NE +   +R++A    + Q  ++  E  VKWCGLPY ECT
Sbjct: 336 TADKEYIEFFDCEQQMNDELNEQYKVIERVIAHQISRSQGESEGTEYFVKWCGLPYSECT 395

Query: 33  WE 28
           WE
Sbjct: 396 WE 397


>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza
           sativa GN=PKL PE=2 SV=1
          Length = 1360

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
 Frame = -3

Query: 333 ISEAQKDLDANDDKPPLLYE---------------FLVKWVGKSHIHDQWVKGTELKALA 199
           ++E +K LD  + KP    E               +L+KW G SH+H  WV  +E    A
Sbjct: 108 LTEMEKILDCEETKPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETA 167

Query: 198 K------RKLDNYRFKYRNAC-----INLVNEMWCKPQRIVAKRQELTDAHEVLVKWCGL 52
           K       +L+N+  +  +        + +   W    RI+A R+  T   E  VKW  L
Sbjct: 168 KIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVDRILATRKSSTGEREYYVKWKEL 227

Query: 51  PYDECTWEN 25
            YDECTWEN
Sbjct: 228 TYDECTWEN 236