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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918414
Clone id YMU001_000113_C02
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGCACAGAAGTAGTCGTATTGTATATAGTGGGGAATATCCCCTACAACGAGCTGGGTTGC
CTGTGAGATGGTCGATATCTACTGCTACCAGAGGTCCAGCTCTCCCGAGAGATGAAATAA
TTGGCTCCTTATTAAAGGCAGTAGCCGTCGCAAGCCATCCTGATTCAAGGCTGCAAACAT
GCACTCCCTTTGAGATCCCTACTACAGATGACCTATTTGGCCGCTACTGGCACTATCCTC
CCAGGTCCATCAACAGGTTTTGTAAATGACTAACCATACAAATAGTTTCCAGGGACAGGC
ACTGCTTCGCCAAACTAATCCACCACTAACGGCACTATCCTCTCGGGCAATCAAAAGTTT
TTCTAAAATACTGACCTCGACAAAAGGTAACCTATTAGCCAATTGCCTGACAGCACCAGA
GCAAAGTGAAGACCAACATCTATAACACCAACCATCACGAACATTACAATTCATCAAAAG
GGCTTTATTGATAGCAAACCAAAGTAC
■■Homology search results ■■ -
sp_hit_id Q922R5
Definition sp|Q922R5|P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Mus musculus
Align length 56
Score (bit) 35.8
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918414|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C02.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q922R5|P4R3B_MOUSE Serine/threonine-protein phosphatase 4 reg...    36   0.12 
sp|Q2F9P2|FA7_PANTR Coagulation factor VII OS=Pan troglodytes GN...    30   5.0  
sp|P08709|FA7_HUMAN Coagulation factor VII OS=Homo sapiens GN=F7...    30   5.0  
sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio re...    30   6.5  

>sp|Q922R5|P4R3B_MOUSE Serine/threonine-protein phosphatase 4
           regulatory subunit 3B OS=Mus musculus GN=Smek2 PE=2 SV=2
          Length = 820

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = +2

Query: 269 TNHTNSFQGQALLRQTNPPLTALSSRAIKSFSKILTSTKGNLLANCLTAPEQSEDQ 436
           TN TNS   ++++ QT P  + ++S    S +  +T+TKGNL+       ++ ED+
Sbjct: 751 TNGTNSTNSKSVVSQTTPASSNVASSKTTSLATSVTATKGNLVGLVDYPDDEEEDE 806


>sp|Q2F9P2|FA7_PANTR Coagulation factor VII OS=Pan troglodytes GN=F7
           PE=3 SV=1
          Length = 466

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = -1

Query: 447 CYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLFV 277
           C+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ +
Sbjct: 174 CHEGYSLLADGVSCTPTVEYPCGKIPILEKRNASKPQGRIVGGKVCPKGECPWQVLL 230


>sp|P08709|FA7_HUMAN Coagulation factor VII OS=Homo sapiens GN=F7
           PE=1 SV=1
          Length = 466

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = -1

Query: 447 CYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLFV 277
           C+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ +
Sbjct: 174 CHEGYSLLADGVSCTPTVEYPCGKIPILEKRNASKPQGRIVGGKVCPKGECPWQVLL 230


>sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio rerio
           GN=sphkap PE=3 SV=1
          Length = 1596

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 25/86 (29%), Positives = 33/86 (38%)
 Frame = -3

Query: 289 ETICMVSHLQNLLMDLGG*CQ*RPNRSSVVGISKGVHVCSLESGWLATATAFNKEPIISS 110
           ET+C  S+ Q L        + RP     V  S G +  +L    L  A     +   S 
Sbjct: 291 ETLCTSSNSQKLSRTYSAPARGRPTTPKQVKESAGHYATNLAESVLQDAFIRLSQDEPSF 350

Query: 109 LGRAGPLVAVDIDHLTGNPARCRGYS 32
           +  A   V+ DI H T  P R R  S
Sbjct: 351 VAEAAVSVSSDISHSTEAPQRARACS 376
tr_hit_id A9X171
Definition tr|A9X171|A9X171_PAPAN Coagulation factor VII (Predicted) OS=Papio anubis
Align length 61
Score (bit) 35.8
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918414|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C02.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9X171|A9X171_PAPAN Coagulation factor VII (Predicted) OS=Pap...    36   1.2  
tr|A0N0C5|A0N0C5_MACMU Coagulation factor VII protein OS=Macaca ...    36   1.2  
tr|Q2F9N5|Q2F9N5_PONPY Cogulation factor VII (Fragment) OS=Pongo...    35   1.6  
tr|Q2F9N4|Q2F9N4_PONPY Cogulation factor VII (Fragment) OS=Pongo...    35   1.6  
tr|B3T6I8|B3T6I8_9ZZZZ Putative uncharacterized protein OS=uncul...    35   2.7  
tr|B5SNI1|B5SNI1_OTOGA Coagulation factor VII isoform a (Predict...    35   2.7  
tr|B3EAM9|B3EAM9_GEOLS Putative signal peptide protein OS=Geobac...    33   6.0  

>tr|A9X171|A9X171_PAPAN Coagulation factor VII (Predicted) OS=Papio
           anubis GN=F7 PE=3 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -1

Query: 459 RDGWCYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLF 280
           R  WC+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ 
Sbjct: 148 RSCWCHEGYSLLADGVSCMPTVEYPCGKIPILEKRNASKPQGRIVGGRVCPKGECPWQVL 207

Query: 279 V 277
           +
Sbjct: 208 L 208


>tr|A0N0C5|A0N0C5_MACMU Coagulation factor VII protein OS=Macaca
           mulatta PE=2 SV=2
          Length = 472

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -1

Query: 459 RDGWCYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLF 280
           R  WC+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ 
Sbjct: 176 RSCWCHEGYSLLADGVSCMPTVEYPCGKIPILEKRNASKPQGRIVGGRVCPKGECPWQVL 235

Query: 279 V 277
           +
Sbjct: 236 L 236


>tr|Q2F9N5|Q2F9N5_PONPY Cogulation factor VII (Fragment) OS=Pongo
           pygmaeus GN=F7 PE=3 SV=1
          Length = 444

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -1

Query: 459 RDGWCYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLF 280
           R  WC+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ 
Sbjct: 148 RSCWCHEGYSLLADGVSCTPTVEYPCGKIPILEKRNASKPQGRIVGGKVCPKGECPWQVL 207

Query: 279 V 277
           +
Sbjct: 208 L 208


>tr|Q2F9N4|Q2F9N4_PONPY Cogulation factor VII (Fragment) OS=Pongo
           pygmaeus GN=F7 PE=3 SV=1
          Length = 444

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -1

Query: 459 RDGWCYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLF 280
           R  WC+  +S L  G         P  ++ ILEK   ++    + GG V     CPW++ 
Sbjct: 148 RSCWCHEGYSLLADGVSCTPTVEYPCGKIPILEKRNASKPQGRIVGGKVCPKGECPWQVL 207

Query: 279 V 277
           +
Sbjct: 208 L 208


>tr|B3T6I8|B3T6I8_9ZZZZ Putative uncharacterized protein
           OS=uncultured marine microorganism HF4000_APKG2J17
           GN=ALOHA_HF4000APKG2J17ctg1g4 PE=4 SV=1
          Length = 257

 Score = 34.7 bits (78), Expect = 2.7
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 139 AFNKEPIISSLGRAGPLVAVDIDHLTGNPA 50
           A  KEP++S LG  G +V VD  ++ GNPA
Sbjct: 39  AMTKEPLLSKLGTGGGIVEVDETYIGGNPA 68


>tr|B5SNI1|B5SNI1_OTOGA Coagulation factor VII isoform a (Predicted)
           OS=Otolemur garnettii GN=F7 PE=4 SV=1
          Length = 444

 Score = 34.7 bits (78), Expect = 2.7
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -1

Query: 459 RDGWCYRCWSSLCSGAVRQLANRLPFVEVSILEKLLIAREDSAVSGGLVWRSSACPWKLF 280
           R  WC+  +S    G         P  ++ ILEK   +  +  + GG V R   CPW+  
Sbjct: 148 RSCWCHEGYSLQPDGVSCAPTVEYPCGKIPILEKRNTSNPEGRIVGGKVCRKGECPWQAM 207

Query: 279 VWL 271
           + L
Sbjct: 208 LTL 210


>tr|B3EAM9|B3EAM9_GEOLS Putative signal peptide protein OS=Geobacter
           lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)
           GN=Glov_3206 PE=4 SV=1
          Length = 299

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 287 FQGQALLRQTNPPLTALSSRAIKSFSKILTSTKGNLLANCLTAPEQSEDQHL*HQPSRTL 466
           ++G A L         L+ + +   + + T   GNLLA  LTA E+  D  L H   +TL
Sbjct: 204 YRGAAELYFKGLQAAGLNQKRVYFLAGVRTLQSGNLLAEALTAAERHLDAGLAHD-RQTL 262

Query: 467 QFIKRALLIANQ 502
            ++ R  L AN+
Sbjct: 263 LYLTRLALAANR 274