BP918423
Clone id YMU001_000113_C11
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAATTTAGCTTGAAAACCATAATTGAAAGCAATTCTCTTCGGAAAAAACTGGCTATCATC
CTCCTCAGAAGTATAGCTGTCACTGGAACTCGTTAAAAAGCCATTATTGAGTGCATATTG
GCCCCTCTTGTCGGTTCCCTCCTTCACAGTGGAGACACTGCCATCTTGATCCCTTTCAAC
AGCTTGTTCGGGACTCCTTGCAACACAGACGTAGACATGTCTTGCAGCGTGGCCCTTACC
CTTCTTCAATATGAAGGAATTTGAAGTCAAGACGTGTGTTATGCATACTCTTATCCTGGC
CAATGGATTCACATCTACTAAGGTTACTTTATCTGATGCCAGACAAAGGTGAAGCTTGGT
AGATGCGCAGATGGCCATTGTCCAAAGACGCTCTCTCTCTACGGACTTCCTTCAGCGATT
TCCAGTGCTAGAGGCTAGTGACGATAATGCTAAAAATCGCAGAAATATCGCGAAGCTTTG
AAGTTCGATCCAGCAGAGCAAATGCGTGCGTGTAGGCTTCTGGGG
■■Homology search results ■■ -
sp_hit_id Q9USY1
Definition sp|Q9USY1|YOW5_SCHPO UPF0724 protein C1861.05 OS=Schizosaccharomyces pombe
Align length 56
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918423|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C11.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9USY1|YOW5_SCHPO UPF0724 protein C1861.05 OS=Schizosaccharom... 32 1.4
sp|Q685J3|MUC17_HUMAN Mucin-17 OS=Homo sapiens GN=MUC17 PE=1 SV=1 32 2.4
sp|Q9LG11|HAC4_ARATH Histone acetyltransferase HAC4 OS=Arabidops... 30 7.0

>sp|Q9USY1|YOW5_SCHPO UPF0724 protein C1861.05
OS=Schizosaccharomyces pombe GN=SPBC1861.05 PE=2 SV=1
Length = 747

Score = 32.3 bits (72), Expect = 1.4
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2

Query: 236 LPFFNMKEFEVKTCVMHTLILANGFTSTKVT-LSDARQR*SLVDAQMAIVQRRSLS 400
+P ++KE+ K+ + HT++ + FTS T ++D L A MAI++ S S
Sbjct: 457 VPTSSIKEYLTKSSLQHTIVEKSNFTSCSYTAINDCNGNLLLAGADMAIMENLSYS 512


>sp|Q685J3|MUC17_HUMAN Mucin-17 OS=Homo sapiens GN=MUC17 PE=1 SV=1
Length = 4493

Score = 31.6 bits (70), Expect = 2.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3

Query: 232 PRCKTCLRLCCKESRTSC*KGSRWQCLHCEGGNRQEGPICTQ 107
PR TC C+ + + C G W L C+ N G +C +
Sbjct: 4130 PRTTTCFGDGCQNTASRCKNGGTWDGLKCQCPNLYYGELCEE 4171


>sp|Q9LG11|HAC4_ARATH Histone acetyltransferase HAC4 OS=Arabidopsis
thaliana GN=HAC4 PE=2 SV=2
Length = 1470

Score = 30.0 bits (66), Expect = 7.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3

Query: 214 LRLCCKESRTSC*KGSRWQCLHCE 143
L+ CCK T G+RW C HC+
Sbjct: 1176 LQHCCKHCTTLMVSGNRWVCNHCK 1199


tr_hit_id B3CDT0
Definition tr|B3CDT0|B3CDT0_9BACE Putative uncharacterized protein OS=Bacteroides intestinalis DSM 17393
Align length 102
Score (bit) 35.4
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918423|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_C11.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3CDT0|B3CDT0_9BACE Putative uncharacterized protein OS=Bacte... 35 1.8
tr|A1WQY5|A1WQY5_VEREI Putative uncharacterized protein OS=Vermi... 33 6.6
tr|Q5YFJ2|Q5YFJ2_9VIRU DNA-directed RNA polymerase OS=Singapore ... 33 6.7
tr|Q5GAH6|Q5GAH6_9VIRU DNA-directed RNA polymerase OS=Grouper ir... 33 6.7
tr|Q888I3|Q888I3_PSESM 3-phosphoshikimate 1-carboxyvinyltransfer... 33 8.8

>tr|B3CDT0|B3CDT0_9BACE Putative uncharacterized protein
OS=Bacteroides intestinalis DSM 17393 GN=BACINT_02349
PE=4 SV=1
Length = 192

Score = 35.4 bits (80), Expect = 1.8
Identities = 28/102 (27%), Positives = 43/102 (42%)
Frame = -1

Query: 411 RKSVERERLWTMAICASTKLHLCLASDKVTLVDVNPLARIRVCITHVLTSNSFILKKGKG 232
R+ +E ER +T A+ A + L +D+VT R V ++ +FIL G
Sbjct: 43 REKIEEERAYTDAVQAIKERKFVLEADRVTFK--------RGRSAFVTSNTNFILLNGDR 94

Query: 231 HAARHVYVCVARSPEQAVERDQDGSVSTVKEGTDKRGQYALN 106
+ + + P DG+V VK TDK+G N
Sbjct: 95 ASVQIAFNGAFAGPNGIGGVTVDGTVGEVKTTTDKKGNVTCN 136


>tr|A1WQY5|A1WQY5_VEREI Putative uncharacterized protein
OS=Verminephrobacter eiseniae (strain EF01-2)
GN=Veis_4339 PE=4 SV=1
Length = 247

Score = 33.5 bits (75), Expect = 6.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3

Query: 78 CHWNSLKSHY*VHIGPSCRFPPSQWRHCHL-DPFQQLVRDSLQHRRR 215
C W SL SH H P+ ++ ++ RH HL +P Q+ +R HRRR
Sbjct: 105 CPWQSLGSHLHPHGQPAQQWRLARGRHRHLGEPGQRTLRRQGGHRRR 151


>tr|Q5YFJ2|Q5YFJ2_9VIRU DNA-directed RNA polymerase OS=Singapore
grouper iridovirus GN=ORF073L PE=3 SV=1
Length = 1103

Score = 33.5 bits (75), Expect = 6.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 19/78 (24%)
Frame = -1

Query: 363 STKLHLCLASDKVTLVDVNPLARIRVCITHVLTSNSFILK-------------KGKG--- 232
+ LHLC A+ T+ + P + +RV ++ +L++N+F K KGK
Sbjct: 362 TNSLHLCFATGNWTVKRIGPPSYVRVGVSQILSNNNFGAKLSHLRRIMHAVSFKGKNIKM 421

Query: 231 ---HAARHVYVCVARSPE 187
H + + ++C +PE
Sbjct: 422 RQLHTSHYGFLCPYETPE 439


>tr|Q5GAH6|Q5GAH6_9VIRU DNA-directed RNA polymerase OS=Grouper
iridovirus GN=GIV40 PE=3 SV=1
Length = 1103

Score = 33.5 bits (75), Expect = 6.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 19/78 (24%)
Frame = -1

Query: 363 STKLHLCLASDKVTLVDVNPLARIRVCITHVLTSNSFILK-------------KGKG--- 232
+ LHLC A+ T+ + P + +RV ++ +L++N+F K KGK
Sbjct: 362 TNSLHLCFATGNWTVKRIGPPSYVRVGVSQILSNNNFGAKLSHLRRIMHAVSFKGKNIKM 421

Query: 231 ---HAARHVYVCVARSPE 187
H + + ++C +PE
Sbjct: 422 RQLHTSHYGFLCPYETPE 439


>tr|Q888I3|Q888I3_PSESM 3-phosphoshikimate 1-carboxyvinyltransferase
OS=Pseudomonas syringae pv. tomato GN=aroA PE=3 SV=1
Length = 418

Score = 33.1 bits (74), Expect = 8.8
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +1

Query: 112 CILAPLVGSLLHSGDTAILIPFNSLFGTPCNTDVD------MSCSVALTLLQYEGI*SQD 273
C +AP G + GD I+ +L GT N +D ++ AL L+ +GI QD
Sbjct: 337 CAIAP--GLAVEEGDDLIVHANPALAGTTVNALIDTHSDHRIAMCFALAGLKIKGIHIQD 394

Query: 274 V-CYAYSYPGQW 306
C A +YPG W
Sbjct: 395 PDCVAKTYPGYW 406