BP918424 |
Clone id |
YMU001_000113_D01 |
Library |
YMU01 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000113_D01. |
Accession |
BP918424 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTGTATAGAAGCTGTAATAACTTTGAATGATCCGCATACTATACACTACGACAAAACT TTTACAGAAAAAATCCATACACAAAATTAGCTCAAACCCCTGGACAAAGACGGCACAGAA TTTGTCTTTTTTAAGAGGTTGTATTAACTGCAGCTGCTGATTCAAATGTTGCTCGTCGAA CAAATTGTCCTTTGACACGGGGCCTTTGTTCGGCCAGCTTCTTCCTACTTTGATAGCGCA CCTTTTTTTCAAAGCACCTCATCTTCCTTTTTTCACGAAATTTGTGAAGAGCTGCTTCTC GAAAGGAGCTCCGGTAGTCATAAACCAAGGGCTTCTGATCTGAGGCATTAGACTCATCAT GAGCATGTACCCCACAGCTATCCATGTCCATCCGGTTACTCTCATTCATGCAGTGCCGGC CACTCAGAGGGTGCCCATCTTGAGCAGCCACACATTCAACAGATCTGCCGGTCATATGCT CTTCAAGCATGCTACTTCCTCGATCACTACAATCGTTACTTCCTCTCCCACTAACCATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q689G6 |
Definition |
sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica |
Align length |
85 |
Score (bit) |
81.6 |
E-value |
2.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BJJ5 |
Definition |
tr|A5BJJ5|A5BJJ5_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
82.4 |
E-value |
1.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918424|Adiantum capillus-veneris mRNA, clone: YMU001_000113_D01. (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BJJ5|A5BJJ5_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|Q84XQ7|Q84XQ7_BRARP Timing of CAB expression 1-like protein (... 82 2e-14 tr|Q0J041|Q0J041_ORYSJ Os09g0532400 protein OS=Oryza sativa subs... 82 2e-14 tr|B8BDU3|B8BDU3_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A9U170|A9U170_PHYPA Circadian clock protein PRR1 (Fragment) O... 82 2e-14 tr|A3C0X1|A3C0X1_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A7Q402|A7Q402_VITVI Chromosome chr13 scaffold_48, whole genom... 80 5e-14 tr|A7NZB2|A7NZB2_VITVI Chromosome chr6 scaffold_3, whole genome ... 80 7e-14 tr|Q2PEF5|Q2PEF5_9ARAE Pseudo-response regulator 95 homologue OS... 80 9e-14 tr|A7PXT9|A7PXT9_VITVI Chromosome chr15 scaffold_37, whole genom... 80 9e-14 tr|Q683A6|Q683A6_ARATH Putative uncharacterized protein At2g4679... 79 1e-13 tr|Q56XM1|Q56XM1_ARATH Putative uncharacterized protein At2g4679... 79 1e-13 tr|Q3EBF0|Q3EBF0_ARATH Uncharacterized protein At2g46670.1 OS=Ar... 79 1e-13 tr|Q2RAB7|Q2RAB7_ORYSJ CCT motif family protein, expressed OS=Or... 79 2e-13 tr|Q2PEF6|Q2PEF6_9ARAE Pseudo-response regulator 59 homologue OS... 79 2e-13 tr|Q0IUG8|Q0IUG8_ORYSJ Os11g0157600 protein OS=Oryza sativa subs... 79 2e-13 tr|B8BJ76|B8BJ76_ORYSI Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|A9SIB9|A9SIB9_PHYPA Circadian clock protein PRR2 OS=Physcomit... 79 2e-13 tr|A7QEV3|A7QEV3_VITVI Chromosome chr16 scaffold_86, whole genom... 79 2e-13 tr|Q2PEF2|Q2PEF2_LEMGI Pseudo-response regulator 95 homologue OS... 78 3e-13 tr|B6U1H8|B6U1H8_MAIZE Two-component response regulator-like PRR... 78 3e-13 tr|B4FWH6|B4FWH6_MAIZE Putative uncharacterized protein OS=Zea m... 77 4e-13 tr|Q2PEF3|Q2PEF3_LEMGI Pseudo-response regulator 59 homologue OS... 77 6e-13 tr|B4FPX9|B4FPX9_MAIZE Putative uncharacterized protein OS=Zea m... 77 8e-13 tr|Q2PEF7|Q2PEF7_9ARAE Pseudo-response regulator 37 homologue OS... 76 1e-12 tr|B8ALJ0|B8ALJ0_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|A3AGR4|A3AGR4_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|Q4PRK6|Q4PRK6_ARATH Pseudo response regulator 3 OS=Arabidopsi... 75 2e-12 tr|Q4PRK5|Q4PRK5_ARATH Pseudo response regulator 3 OS=Arabidopsi... 75 2e-12 tr|A7J5U5|A7J5U5_AEGTA Pseudo-response regulator OS=Aegilops tau... 75 2e-12
>tr|A5BJJ5|A5BJJ5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1 Length = 991
Score = 82.4 bits (202), Expect = 1e-14 Identities = 47/97 (48%), Positives = 60/97 (61%) Frame = -3
Query: 439 DGHPLSGRHCMNESNRMDMDSCGVHAHDESNASDQKPLVYDYRSSFREAALHKFREKRKM 260 DG+P S + + ++ G+ +D D + S+ REAAL KFR KRK Sbjct: 654 DGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDS------HHSTQREAALMKFRLKRKD 707
Query: 259 RCFEKKVRYQSRKKLAEQRPRVKGQFVRRATFESAAA 149 RCFEKKVRYQSRK+LAEQRPRVKGQFVR+ ++ A Sbjct: 708 RCFEKKVRYQSRKRLAEQRPRVKGQFVRQVQTDTPTA 744
>tr|Q84XQ7|Q84XQ7_BRARP Timing of CAB expression 1-like protein (Fragment) OS=Brassica rapa subsp. pekinensis PE=2 SV=1 Length = 104
Score = 82.0 bits (201), Expect = 2e-14 Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = -3
Query: 433 HPLSGRHCMNESNRMDMDSCGVHAHDESNASDQKPLVYDYRSSF-REAALHKFREKRKMR 257 HP +G M+ R + S H+ +++ S V + S REAAL+KFR KRK R Sbjct: 6 HPFNGS--MDAEERRHISSTTEHSAIDNHCSANSSSVGRTQQSLQREAALNKFRMKRKDR 63
Query: 256 CFEKKVRYQSRKKLAEQRPRVKGQFVRR 173 CF+KKVRY+SRKKLAEQRPR+KGQFVR+ Sbjct: 64 CFDKKVRYESRKKLAEQRPRIKGQFVRQ 91
>tr|Q0J041|Q0J041_ORYSJ Os09g0532400 protein OS=Oryza sativa subsp. japonica GN=Os09g0532400 PE=2 SV=1 Length = 623
Score = 81.6 bits (200), Expect = 2e-14 Identities = 49/85 (57%), Positives = 56/85 (65%) Frame = -3
Query: 427 LSGRHCMNESNRMDMDSCGVHAHDESNASDQKPLVYDYRSSFREAALHKFREKRKMRCFE 248 LSG C + SN M + + SN + P + S REAAL+KFR KRK RCFE Sbjct: 539 LSGSVCDSSSNHM------IAPTESSNVVPENPDGLRHLSQ-REAALNKFRLKRKDRCFE 591
Query: 247 KKVRYQSRKKLAEQRPRVKGQFVRR 173 KKVRYQSRK LAEQRPRVKGQFVR+ Sbjct: 592 KKVRYQSRKLLAEQRPRVKGQFVRQ 616
>tr|B8BDU3|B8BDU3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32150 PE=4 SV=1 Length = 623
Score = 81.6 bits (200), Expect = 2e-14 Identities = 49/85 (57%), Positives = 56/85 (65%) Frame = -3
Query: 427 LSGRHCMNESNRMDMDSCGVHAHDESNASDQKPLVYDYRSSFREAALHKFREKRKMRCFE 248 LSG C + SN M + + SN + P + S REAAL+KFR KRK RCFE Sbjct: 539 LSGSVCDSSSNHM------IAPTESSNVVPENPDGLRHLSQ-REAALNKFRLKRKDRCFE 591
Query: 247 KKVRYQSRKKLAEQRPRVKGQFVRR 173 KKVRYQSRK LAEQRPRVKGQFVR+ Sbjct: 592 KKVRYQSRKLLAEQRPRVKGQFVRQ 616
>tr|A9U170|A9U170_PHYPA Circadian clock protein PRR1 (Fragment) OS=Physcomitrella patens subsp. patens GN=PpPRR1 PE=4 SV=1 Length = 425
Score = 81.6 bits (200), Expect = 2e-14 Identities = 40/54 (74%), Positives = 47/54 (87%) Frame = -3
Query: 313 RSSFREAALHKFREKRKMRCFEKKVRYQSRKKLAEQRPRVKGQFVRRATFESAA 152 R + REAAL+KFR+KRK RCFEKKVRYQSRKKLAEQRPRV+G FVR+A + +A Sbjct: 368 RFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGLFVRQAAHDPSA 421
>tr|A3C0X1|A3C0X1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028943 PE=4 SV=1 Length = 665
Score = 81.6 bits (200), Expect = 2e-14 Identities = 49/85 (57%), Positives = 56/85 (65%) Frame = -3
Query: 427 LSGRHCMNESNRMDMDSCGVHAHDESNASDQKPLVYDYRSSFREAALHKFREKRKMRCFE 248 LSG C + SN M + + SN + P + S REAAL+KFR KRK RCFE Sbjct: 581 LSGSVCDSSSNHM------IAPTESSNVVPENPDGLRHLSQ-REAALNKFRLKRKDRCFE 633
Query: 247 KKVRYQSRKKLAEQRPRVKGQFVRR 173 KKVRYQSRK LAEQRPRVKGQFVR+ Sbjct: 634 KKVRYQSRKLLAEQRPRVKGQFVRQ 658
>tr|A7Q402|A7Q402_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029486001 PE=4 SV=1 Length = 711
Score = 80.5 bits (197), Expect = 5e-14 Identities = 37/43 (86%), Positives = 42/43 (97%) Frame = -3
Query: 301 REAALHKFREKRKMRCFEKKVRYQSRKKLAEQRPRVKGQFVRR 173 REAAL+KFR+KRK RCFEKKVRYQSRK+LAEQRPR++GQFVRR Sbjct: 657 REAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRR 699
>tr|A7NZB2|A7NZB2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024444001 PE=4 SV=1 Length = 719
Score = 80.1 bits (196), Expect = 7e-14 Identities = 39/54 (72%), Positives = 46/54 (85%) Frame = -3
Query: 325 VYDYRSSFREAALHKFREKRKMRCFEKKVRYQSRKKLAEQRPRVKGQFVRRATF 164 V + R + REAAL KFR+KRK RCFEKKVRYQSRKKLAEQRPR++GQFVR+ + Sbjct: 661 VEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQNVY 714
>tr|Q2PEF5|Q2PEF5_9ARAE Pseudo-response regulator 95 homologue OS=Lemna paucicostata GN=LpPRRH95 PE=2 SV=1 Length = 448
Score = 79.7 bits (195), Expect = 9e-14 Identities = 42/63 (66%), Positives = 46/63 (73%) Frame = -3
Query: 361 HDESNASDQKPLVYDYRSSFREAALHKFREKRKMRCFEKKVRYQSRKKLAEQRPRVKGQF 182 H + + P + S REAAL KFR KRK RCFEKKVRYQSRKKLAEQRPRVKGQF Sbjct: 381 HSSITSENGAPQAKIWLSVEREAALTKFRLKRKDRCFEKKVRYQSRKKLAEQRPRVKGQF 440
Query: 181 VRR 173 VR+ Sbjct: 441 VRQ 443
>tr|A7PXT9|A7PXT9_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026171001 PE=4 SV=1 Length = 497
Score = 79.7 bits (195), Expect = 9e-14 Identities = 40/56 (71%), Positives = 46/56 (82%) Frame = -3
Query: 316 YRSSFREAALHKFREKRKMRCFEKKVRYQSRKKLAEQRPRVKGQFVRRATFESAAA 149 + S+ REAAL KFR KRK RCFEKKVRYQSRK+LAEQRPRVKGQFVR+ ++ A Sbjct: 440 HHSTQREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVQTDTPTA 495
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