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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918432
Clone id YMU001_000113_D10
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGCATTTTCCCGGGATTGTCCATCAAAGGGAAGGTGTGTGTACTGGGAAGCCATGTCAC
CAGTTTGTGACACTTGAGCAGTTCCTAAGTTCTTGCTTTAAGCGCAGGCTGGAGCTGCTT
GTTTTTCTCTTGTTCGGTTTTCAAAGTACTAAAGTTGTTCAAGTCCTGCAGATTTTGGTA
GTTCGCTATCTTTCCATCCAATCGCTCGCCAGAAGAGGTTATATATTGGCAGTACATGGC
AACCTCTTGAGTTCCATACGGTTCCATAGCCATAGATCCATCATAGCACCAAATCCATCA
CGCTCCAGCAAAGGAATGGCAGTCTCCAACAATCTTGAGGACATCTCTCAGGGTGGCCTA
GTGATGAGAACGTGTCTCATCTCCTCAATCTCCCTAAGTTCCTACCTGGCCCGACAAAGC
TTGGCCATGTTAATGGGCTTTTCAAGATTCACTATAGAAGTTGGGAGGGAAGAGATGCCT
CGATCTCTCCCGCTTTCTACAG
■■Homology search results ■■ -
sp_hit_id Q63132
Definition sp|Q63132|ROS_RAT Proto-oncogene tyrosine-protein kinase ROS OS=Rattus norvegicus
Align length 17
Score (bit) 30.0
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918432|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_D10.
         (502 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q63132|ROS_RAT Proto-oncogene tyrosine-protein kinase ROS OS=...    30   6.4  
sp|Q9U7D5|ACM3_CAEEL Muscarinic acetylcholine receptor gar-3 OS=...    30   6.4  

>sp|Q63132|ROS_RAT Proto-oncogene tyrosine-protein kinase ROS
            OS=Rattus norvegicus GN=Ros1 PE=2 SV=1
          Length = 2338

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 352  PERCPQDCWRLPFLCWS 302
            P  CP D W L F CW+
Sbjct: 2175 PRNCPDDLWNLMFRCWA 2191


>sp|Q9U7D5|ACM3_CAEEL Muscarinic acetylcholine receptor gar-3
           OS=Caenorhabditis elegans GN=gar-3 PE=1 SV=2
          Length = 611

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -2

Query: 192 KIANYQNLQDLNNFSTLKT----EQEKNKQLQPALKART*ELLKCHKLVTWLP 46
           K + ++N + L NFS+ +     EQ KN++ Q +  A+T   + C  + TW P
Sbjct: 487 KQSPFKNGRILKNFSSQERKSEKEQRKNERKQESKAAKTLSAILCAFIATWTP 539
tr_hit_id B8LXS7
Definition tr|B8LXS7|B8LXS7_9EURO F-box and wd40 domain protein, putative OS=Talaromyces stipitatus ATCC 10500
Align length 68
Score (bit) 34.3
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918432|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_D10.
         (502 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LXS7|B8LXS7_9EURO F-box and wd40 domain protein, putative O...    34   3.3  
tr|Q0W0W8|Q0W0W8_UNCMA Putative tungsten-containing aldehyde:fer...    33   5.8  
tr|A9CRL7|A9CRL7_9MICR t-SNARE complex subunit, syntaxin OS=Ente...    33   7.6  

>tr|B8LXS7|B8LXS7_9EURO F-box and wd40 domain protein, putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_080170 PE=4
           SV=1
          Length = 1260

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +3

Query: 240 QPLEFHTVP*P*IHHSTKSITLQQRNGSLQQS*GHLSGWPSDENVSHLLNL--PKFLPGP 413
           Q L  H +P P I H  + + L+ +  ++++     S WP DE ++ L+ +  P F+   
Sbjct: 238 QDLVLHELPKPVIEHDIR-LYLEDKFSTIRKERSFASNWPGDEVINELVRMSTPLFIFAA 296

Query: 414 TKLGHVNG 437
           T    VNG
Sbjct: 297 TAYRFVNG 304


>tr|Q0W0W8|Q0W0W8_UNCMA Putative tungsten-containing
           aldehyde:ferredoxin oxidoreductase OS=Uncultured
           methanogenic archaeon RC-I GN=aor-2 PE=4 SV=1
          Length = 634

 Score = 33.5 bits (75), Expect = 5.8
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = -1

Query: 238 HVLPIYNLFWRAIGWKDSELP-----KSAGLEQL*YFENRTREKQAAPACA 101
           H+ P+ + ++ A GW  S +P     +S GLE +    NR RE+  APA A
Sbjct: 584 HLDPMLDAYYEARGWDRSGIPTMEKLRSLGLEHVSRDLNRAREEAGAPATA 634


>tr|A9CRL7|A9CRL7_9MICR t-SNARE complex subunit, syntaxin
           OS=Enterocytozoon bieneusi H348 GN=EBI_26386 PE=4 SV=1
          Length = 272

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -2

Query: 252 TQEVAMYCQYITSSGERLDGKIANYQNLQDLNNFSTLKTEQEKNKQLQPALKA 94
           T EV + C Y+     +LD  IA Y+NL + +N  + K E  KNK+    +KA
Sbjct: 19  TCEVYLNCDYLRKHLSQLDKNIAVYKNLINYDNLPSFK-ENVKNKEKIKDIKA 70