BP918434
Clone id YMU001_000113_D12
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTCTAATCGAGTAGCGCGGGGTCATGGTCTCCCCCCATTAGCGTTGATCAGATAGCATCA
TCATCATGGGCTTTGCCTGTTTTGAACTAAACTGATTTTTATATCAAGGCTTAGTCTGTC
TTTGTTGTTTACTGGCGATTATCATCGCTGCTGTTGTTGTTGCCATCACCGCCGCCGCCA
CGATCGTCATCACCATCACCGACCCCATCAAACCTGCCGCACTGAAAAACTCACAGTACA
CATCCCCCTACAGAATGTCCGTACGCTTTCATTTTACCTTTTCGTCTTTTTCTTTTTCTT
CTAGCCAGCAACTCTAGAAGCACATGCACAACTTACTTCCCCTCCCTCAGCACTAAAGCC
ATCAGGCTCACTTGCTTTGTGTTTGTGTGGTGTCATGTGAGTGAAGGGAAATTCTTCTCT
TTTCCTTGGCAACCATAGTAGATGTCTGGGATCATAGTTGTCAGTGCAATAATTTCAGTG
GATTACCACCATTCTTGTACATTAATATTGTGCATTCTTGTGTACTAGTATTGGTTTCAA
GTTTG
■■Homology search results ■■ -
sp_hit_id Q1QUS4
Definition sp|Q1QUS4|LFTR_CHRSD Leucyl/phenylalanyl-tRNA--protein transferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)
Align length 46
Score (bit) 30.8
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918434|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_D12.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1QUS4|LFTR_CHRSD Leucyl/phenylalanyl-tRNA--protein transfera... 31 4.4
sp|O13819|YMR1_SCHPO Probable phosphoinositide 3-phosphatase OS=... 30 5.8

>sp|Q1QUS4|LFTR_CHRSD Leucyl/phenylalanyl-tRNA--protein transferase
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=aat PE=3 SV=1
Length = 256

Score = 30.8 bits (68), Expect = 4.4
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3

Query: 441 LLWLPRKREEFPFTHMTPHKHKASEPDGFSAEGGEVSCA---CASR 313
L WLP R FP +H EPDG A GG+++ A CA R
Sbjct: 2 LPWLPAHRVAFPAV-----EHALREPDGLLAAGGDLTPAWLRCAYR 42


>sp|O13819|YMR1_SCHPO Probable phosphoinositide 3-phosphatase
OS=Schizosaccharomyces pombe GN=SPAC19A8.03 PE=2 SV=1
Length = 559

Score = 30.4 bits (67), Expect = 5.8
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1

Query: 509 NINVQEWW*STEIIALTTMIPD--IYYGCQGKEKN-FPSLT*HHTNTKQVS 366
N N E + +A+ I D IYYGC+ + KN FP+LT H N+ ++
Sbjct: 154 NENYSECHSYPQALAVPASISDSVIYYGCKYRSKNRFPTLTYLHKNSFSIT 204


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918434|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_D12.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******