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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918437
Clone id YMU001_000113_E04
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGCACTTGCTAGAGGTGAAAAGTCTTCTACTTTGGAACCACTGTCACTTTCATTAGTCCA
GGTCTATGCTCATGTTTCCCTCATTGGAGGACATACCACTGAAAGAAGTCCTAACTGTCA
AGGGTGGGAGCATACTGGAACCTTCCTGCTGCCCCTTCAATTCTTCATCTGACCCTCTCA
CTCTTAAACCCCTCGCCGAACCTAGCGATTTCTCTTCTTCCAACTGCCCTGAGTCAAATC
CTCCTTCCACATCAGCTCGGCAGCTTCCCAGCTTCTCATCATCTACCTCATCAGTTTCAT
CATCATCTTCAGCCGTTAGCTTAGCTACAGGCATGGCCCTGCTGAAGTCCCCTGCTGCAA
AATTCTCCTCCGCTTTGATTGACATAATCCACTTAGGCCCTTTCCCAACAATGGGTAGAA
GAGCATTGATTATACTGTCTACAACATCATCATCTGGCGAAACAGTTTGTGCCTTGGCAA
TGCTCAGCACTCGGCTTCTAAAACCTTCCTGATCAGTGTTCTCCAGGAGAGAAGTATCCA
GAGAAGAACATCCAGTATTAAG
■■Homology search results ■■ -
sp_hit_id P52684
Definition sp|P52684|MAUR_KLEPN Malonate utilization transcriptional regulator OS=Klebsiella pneumoniae
Align length 52
Score (bit) 31.6
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918437|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_E04.
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P52684|MAUR_KLEPN Malonate utilization transcriptional regula...    32   2.8  
sp|Q24803|ADH2_ENTHI Aldehyde-alcohol dehydrogenase 2 OS=Entamoe...    30   8.1  

>sp|P52684|MAUR_KLEPN Malonate utilization transcriptional regulator
           OS=Klebsiella pneumoniae GN=mauR PE=4 SV=1
          Length = 308

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 5   LARGEKSSTLEPLSLSLVQVYAHVSLIGGHTTERSPNCQGWEHTGTFLLPLQ 160
           +A+G  + T E + LS V V+  +     HT E    C  + H G  LLPLQ
Sbjct: 21  MAKGNIARTAEAMKLSSVSVHRAL-----HTLEEGVGCPLFVHKGRNLLPLQ 67


>sp|Q24803|ADH2_ENTHI Aldehyde-alcohol dehydrogenase 2 OS=Entamoeba
           histolytica GN=ADH2 PE=1 SV=1
          Length = 870

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 402 FPTMGRRA-LIILSTTSSSGETVCALAMLS 488
           FPTMG++A LI + TTS +G  V   A++S
Sbjct: 593 FPTMGKKARLICIPTTSGTGSEVTPFAVIS 622
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918437|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_E04.
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******