BP918439 |
Clone id |
YMU001_000113_E06 |
Library |
YMU01 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000113_E06. |
Accession |
BP918439 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1216Contig1 |
Sequence |
CCCGTGATCAGAGAGACTTTGTATTATCCAAAATCTTTACATTTCTTCATCATTGTTCAC GTGCCTCTGCTTCACGAACAAGATCCATATTGCACATAAAAGTTGGCCTCTTACCTTAAG CTCTGTTATCCTGCCAGAGTTAATTTCATTGCAGACACCCTTCAATACAATGGCAAATAG GGGCAATAAAAGGAAAGGGGGAGGGGGCCAATGAAGAAAAGGAATAGGAGGGTGGTTAAC CACAGATCCTATTAGCTGAGACGGGCCTCTCTTTGCAAAACCTCTTCCGTAAACTTGATC AAAATCGTTGTCCTTGGCCGTGGTTGACCTTCTACAGGTACGAAGTGTGCTGTAACCCTT GCTGGGAAGCCCGAGCCATCAAGCACACCCTTTACTATGCCTGCAACGTATGCCCCACAA TTAAAAGCTCCCATATCCTTGGGAACAGAAATAAACCTGTTAACAAGTAGCTCTTTTTCG CTGATCATGTACTCATCTTCATTTTCAGTTCCTTTTTCCAAAGAGTCTGCAACCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54YG5 |
Definition |
sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum |
Align length |
89 |
Score (bit) |
112.0 |
E-value |
1.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUE7 |
Definition |
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
91 |
Score (bit) |
169.0 |
E-value |
1.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918439|Adiantum capillus-veneris mRNA, clone: YMU001_000113_E06. (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea... 169 1e-40 tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea m... 166 9e-40 tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert seque... 165 2e-39 tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza... 165 2e-39 tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Popul... 163 4e-39 tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g5... 163 6e-39 tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medic... 162 1e-38 tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Popul... 162 1e-38 tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genom... 162 1e-38 tr|A5BKF7|A5BKF7_VITVI Putative uncharacterized protein OS=Vitis... 162 1e-38 tr|Q9XFA1|Q9XFA1_SOLCH SPP30 OS=Solanum chacoense GN=SPP30 PE=2 ... 160 5e-38 tr|A9TS83|A9TS83_PHYPA Predicted protein OS=Physcomitrella paten... 159 8e-38 tr|A2ZX31|A2ZX31_ORYSJ Putative uncharacterized protein OS=Oryza... 157 2e-37 tr|A9TMK6|A9TMK6_PHYPA Predicted protein OS=Physcomitrella paten... 143 6e-33 tr|A7EE44|A7EE44_SCLS1 Putative uncharacterized protein OS=Scler... 100 4e-20 tr|A6S866|A6S866_BOTFB Putative uncharacterized protein OS=Botry... 100 4e-20 tr|B0CQU1|B0CQU1_LACBS TRAPP complex subunit trs31 OS=Laccaria b... 97 4e-19 tr|B8PC92|B8PC92_9APHY Predicted protein OS=Postia placenta Mad-... 97 5e-19 tr|Q013E9|Q013E9_OSTTA SPP30-like (ISS) OS=Ostreococcus tauri GN... 97 7e-19 tr|B8BSU9|B8BSU9_THAPS Predicted protein OS=Thalassiosira pseudo... 97 7e-19 tr|A3FPW1|A3FPW1_CRYPV 41-2 protein antigen (Fragment) OS=Crypto... 96 9e-19 tr|A8N279|A8N279_COPC7 Putative uncharacterized protein OS=Copri... 96 9e-19 tr|B2B5Z3|B2B5Z3_PODAN Predicted CDS Pa_2_6250 OS=Podospora anse... 95 2e-18 tr|Q7S793|Q7S793_NEUCR Putative uncharacterized protein OS=Neuro... 94 3e-18 tr|A4REB6|A4REB6_MAGGR Putative uncharacterized protein OS=Magna... 94 6e-18 tr|A8J2W3|A8J2W3_CHLRE Component of TRAPP complex OS=Chlamydomon... 93 7e-18 tr|Q5KMH2|Q5KMH2_CRYNE ER to Golgi transport-related protein, pu... 93 7e-18 tr|A4S1I1|A4S1I1_OSTLU Predicted protein OS=Ostreococcus lucimar... 92 1e-17 tr|A3GI95|A3GI95_PICST Transport protein particle (TRAPP) comple... 92 2e-17 tr|Q2GWT9|Q2GWT9_CHAGB Putative uncharacterized protein OS=Chaet... 92 2e-17
>tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 228
Score = 169 bits (427), Expect = 1e-40 Identities = 83/91 (91%), Positives = 89/91 (97%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISE+ELLVNRFISVPKDMG FNCGA+VAGIVKGVLDG+GFPA V Sbjct: 136 VADSLEKGTEHEDEYMISERELLVNRFISVPKDMGNFNCGAFVAGIVKGVLDGAGFPAVV 195
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 +AHFVPVEGQPRPRTTILIKF+EEVLQREAR Sbjct: 196 SAHFVPVEGQPRPRTTILIKFSEEVLQREAR 226
>tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 194
Score = 166 bits (419), Expect = 9e-40 Identities = 82/91 (90%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFISVPKDMGAFNCGA+VAGIVKGVLD +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISVPKDMGAFNCGAFVAGIVKGVLDNAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL REAR Sbjct: 162 TAHFVPIEGQQRPRTTILIKFAEEVLHREAR 192
>tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0510F09.29 PE=2 SV=1 Length = 194
Score = 165 bits (417), Expect = 2e-39 Identities = 81/91 (89%), Positives = 87/91 (95%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVLQREAR Sbjct: 162 TAHFVPIEGQQRPRTTILIKFAEEVLQREAR 192
>tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03459 PE=4 SV=1 Length = 194
Score = 165 bits (417), Expect = 2e-39 Identities = 81/91 (89%), Positives = 87/91 (95%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVLQREAR Sbjct: 162 TAHFVPIEGQQRPRTTILIKFAEEVLQREAR 192
>tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 194
Score = 163 bits (413), Expect = 4e-39 Identities = 80/91 (87%), Positives = 87/91 (95%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL+REAR Sbjct: 162 TAHFVPMEGQHRPRTTILIKFGEEVLRREAR 192
>tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g58030) OS=Arabidopsis thaliana GN=At5g58030 PE=2 SV=1 Length = 195
Score = 163 bits (412), Expect = 6e-39 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFIS+PKDMG FNCGA+VAGIVKGVLD +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF +EVL+REAR Sbjct: 162 TAHFVPIEGQQRPRTTILIKFADEVLKREAR 192
>tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 194
Score = 162 bits (410), Expect = 1e-38 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVN+FIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL REAR Sbjct: 162 TAHFVPMEGQQRPRTTILIKFAEEVLLREAR 192
>tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 194
Score = 162 bits (410), Expect = 1e-38 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFIS+PKDMG FNCGA+VAGIV+GVLD +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL+REAR Sbjct: 162 TAHFVPMEGQQRPRTTILIKFAEEVLRREAR 192
>tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017228001 PE=4 SV=1 Length = 194
Score = 162 bits (410), Expect = 1e-38 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFIS+PKDMG FNCGA+VAGIV+GVLD +GFPA V Sbjct: 102 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVV 161
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL+REAR Sbjct: 162 TAHFVPMEGQQRPRTTILIKFAEEVLRREAR 192
>tr|A5BKF7|A5BKF7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022017 PE=4 SV=1 Length = 122
Score = 162 bits (410), Expect = 1e-38 Identities = 79/91 (86%), Positives = 86/91 (94%) Frame = -3
Query: 533 VADSLEKGTENEDEYMISEKELLVNRFISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARV 354 VADSLEKGTE+EDEYMISEKELLVNRFIS+PKDMG FNCGA+VAGIV+GVLD +GFPA V Sbjct: 30 VADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVV 89
Query: 353 TAHFVPVEGQPRPRTTILIKFTEEVLQREAR 261 TAHFVP+EGQ RPRTTILIKF EEVL+REAR Sbjct: 90 TAHFVPMEGQQRPRTTILIKFAEEVLRREAR 120
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