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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918449
Clone id YMU001_000113_F04
Library
Length 232
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTATCCAATCAAACTGAGAAGCCAAAGGAAGAACTCCTGCTTCTGAAAAATAGAAGTGAC
CTACTTGATAAAGTCCATTAAGTACAGGGGCATTATGAACACCCATGTTTACAAGGTTTC
ATGAGATGAGGGGAGTTGTTCTCTAGGGACCTTCAGCATGTTTTTGTGCTATAGACAACT
TCCTACTTTGCATTTTTTTGGGACAAGAACTGTGCAGAAAACAAAGACGATT
■■Homology search results ■■ -
sp_hit_id Q3UHK6
Definition sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus
Align length 32
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918449|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_F04.
         (232 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Odz4 PE=2 SV=2      29   6.5  
sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2      29   8.4  

>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Odz4 PE=2 SV=2
          Length = 2771

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 118 NLVNMGVHNAPVLNGLYQVGHFYFSEAGVLPL 23
           NL+ M + +A   +G Y  GHF F   G  PL
Sbjct: 264 NLIEMDILSASRHDGAYSDGHFLFKPGGTSPL 295


>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2
          Length = 2769

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 118 NLVNMGVHNAPVLNGLYQVGHFYFSEAGVLPL 23
           NL+ M +  A   +G Y  GHF F   G  PL
Sbjct: 264 NLIEMDILGASRHDGAYSDGHFLFKPGGTSPL 295
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918449|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_F04.
         (232 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******