BP918465
Clone id YMU001_000113_G09
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTTGTGTAGGTCGTCACCTTTTTTGGCTTGATGCTCATTTCTTCAACGAGTTTTTATAT
TTCATGCAATTTTCGAGTAGCTTTTGAATGTCTATTGTTGAGGGAGGGTAGTTAAAGTAC
CTTCAAGATGTTTCTCCTTCTACTTCCAGTCTTCTCACTACACGTGCACTTTTGCCCTTG
GTTGTGGTTGGCGGGTCGTCACCTTTTTTGGCTTGATGCTCATTTCTTCAAGAGTTTTTA
TATTTCATGCAATTTTCGAGTAGCTTTTGAATGTCTATTGTTGAGGGAGGGTAGTTAAAG
TACCTTCGAGATGTTTCTCCTTCTACTTCCAGTCTTCTCACTACACGTGCACTTTTGCCC
TTGGTTGTGGTTGGCGAGTCGTACACCTGCAGGATAGGGATCTTAGGTTTTTAGGGTTTG
CACCGATAGCTTTCTTGGCTTAGGCCTATTTTTGCTATTTTAGCTTTTAGGTTGTGAGAT
TTGTAGGAGCTTCACGTCACATACTATGTGGCCTTGGAGGCTGTGTCCTTTGGGAGAAGC
TTTTTCTATTTGGAGTCATTGTCCCCCCCCCCCAG
■■Homology search results ■■ -
sp_hit_id O67688
Definition sp|O67688|Y1828_AQUAE Uncharacterized protein aq_1828 OS=Aquifex aeolicus
Align length 59
Score (bit) 32.3
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918465|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_G09.
(575 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O67688|Y1828_AQUAE Uncharacterized protein aq_1828 OS=Aquifex... 32 1.7
sp|Q5SRT8|CCNJL_MOUSE Cyclin-J-like protein OS=Mus musculus GN=C... 32 3.0
sp|Q18GF9|RL14_HALWD 50S ribosomal protein L14P OS=Haloquadratum... 30 8.6
sp|O24787|RL14_HALSA 50S ribosomal protein L14P OS=Halobacterium... 30 8.6

>sp|O67688|Y1828_AQUAE Uncharacterized protein aq_1828 OS=Aquifex
aeolicus GN=aq_1828 PE=4 SV=1
Length = 230

Score = 32.3 bits (72), Expect = 1.7
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2

Query: 20 FFGLMLISSTSFYISCNFRVAFECLLLREGS*STFKMFLLLLPVFSLHVHFCPWLWLAG 196
FF ++L F FRV F ++ EG +K+ LLLLP F+L + F +L+L G
Sbjct: 43 FFSIILSWLVMF-----FRVIFYTFIIFEGM--IYKLVLLLLPYFALLLMFAIFLYLKG 94



Score = 30.0 bits (66), Expect = 8.6
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2

Query: 197 RHLFWLDAHFFKSFYIS---CNFRVAFECLLLREGS*STFEMFLLLLPVFSLHVHFCPWL 367
R +L FF S +S FRV F ++ EG +++ LLLLP F+L + F +L
Sbjct: 33 RKFSYLSELFFFSIILSWLVMFFRVIFYTFIIFEGM--IYKLVLLLLPYFALLLMFAIFL 90

Query: 368 WL 373
+L
Sbjct: 91 YL 92


>sp|Q5SRT8|CCNJL_MOUSE Cyclin-J-like protein OS=Mus musculus
GN=Ccnjl PE=2 SV=1
Length = 387

Score = 31.6 bits (70), Expect = 3.0
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2

Query: 125 KMFLLLLPVFSLHVHFCPWLWLAGRHL-FWLDAHFFKSFYISCN---FRVAFECLLL 283
+ F+ +L + S H H CP + RHL +L HF + I+ + + VA CLLL
Sbjct: 39 RFFVDILTLLSRHCHLCP----SARHLAIYLLDHFMDQYNITTSKQLYTVAVSCLLL 91


>sp|Q18GF9|RL14_HALWD 50S ribosomal protein L14P OS=Haloquadratum
walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1
Length = 132

Score = 30.0 bits (66), Expect = 8.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3

Query: 180 QGQKCTCSEKTGSRRRNILKVL*LPSLNNRHSKA 79
+G TC++ TG+R ++ V+ NRH KA
Sbjct: 14 RGSLVTCADNTGARELKVISVMGSSGTKNRHPKA 47


>sp|O24787|RL14_HALSA 50S ribosomal protein L14P OS=Halobacterium
salinarium GN=rpl14p PE=3 SV=1
Length = 132

Score = 30.0 bits (66), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3

Query: 363 QGQKCTCSEKTGSRRRNISKVL*LPSLNNRHSKA 262
+G TC++ TG+R I+ V+ NRH KA
Sbjct: 14 KGSLITCADNTGARELKITSVMGYQGRKNRHPKA 47


tr_hit_id A5ZP28
Definition tr|A5ZP28|A5ZP28_9FIRM Putative uncharacterized protein OS=Ruminococcus obeum ATCC 29174
Align length 104
Score (bit) 35.4
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918465|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_G09.
(575 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5ZP28|A5ZP28_9FIRM Putative uncharacterized protein OS=Rumin... 35 2.3
tr|B5D1J1|B5D1J1_9BACE Putative uncharacterized protein OS=Bacte... 35 3.8
tr|B6PJ67|B6PJ67_BRAFL Putative uncharacterized protein OS=Branc... 35 3.8
tr|B6NX21|B6NX21_BRAFL Putative uncharacterized protein OS=Branc... 35 3.8
tr|Q4YSF8|Q4YSF8_PLABE Putative uncharacterized protein (Fragmen... 34 6.5
tr|A9V702|A9V702_MONBE Predicted protein OS=Monosiga brevicollis... 34 6.5
tr|B6PKK4|B6PKK4_BRAFL Putative uncharacterized protein OS=Branc... 33 8.6
tr|B5DT69|B5DT69_DROPS GA23119 OS=Drosophila pseudoobscura pseud... 33 8.6

>tr|A5ZP28|A5ZP28_9FIRM Putative uncharacterized protein
OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_00745 PE=4
SV=1
Length = 773

Score = 35.4 bits (80), Expect = 2.3
Identities = 31/104 (29%), Positives = 46/104 (44%)
Frame = -3

Query: 381 RLANHNQGQKCTCSEKTGSRRRNISKVL*LPSLNNRHSKATRKLHEIXXXXXX*ASSQKR 202
++A N T +KTG +R I+ L NNR++KAT KL S K+
Sbjct: 644 KVATVNSSGVVTFKKKTGGKRVVITAAL----KNNRNAKATYKLTATKNPVTKITISGKK 699

Query: 201 *RPANHNQGQKCTCSEKTGSRRRNILKVL*LPSLNNRHSKATRK 70
N +Q K S K+G+ K + S NN+++ T K
Sbjct: 700 TMKINKSQRLKAKVSGKSGA-----YKTVKWTSSNNKYATVTSK 738


>tr|B5D1J1|B5D1J1_9BACE Putative uncharacterized protein
OS=Bacteroides plebeius DSM 17135 GN=BACPLE_02835 PE=4
SV=1
Length = 534

Score = 34.7 bits (78), Expect = 3.8
Identities = 31/103 (30%), Positives = 49/103 (47%)
Frame = +2

Query: 29 LMLISSTSFYISCNFRVAFECLLLREGS*STFKMFLLLLPVFSLHVHFCPWLWLAGRHLF 208
L++ STS + N+ + +L+ S T+++++ LLP ++L C W + R F
Sbjct: 287 LVMFFSTSTTLLTNYMTS----ILKVDSTHTYQLYIYLLPGYALGAFICFWWFRWQRWRF 342

Query: 209 WLDAHFFKSFYISCNFRVAFECLLLREGS*STFEMFLLLLPVF 337
F + +SC F F L ST+EM L LPVF
Sbjct: 343 ----RFLIAGGMSC-FAAFFGILYFTVSPESTYEM--LFLPVF 378


>tr|B6PJ67|B6PJ67_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_107590 PE=4 SV=1
Length = 163

Score = 34.7 bits (78), Expect = 3.8
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 28/139 (20%)
Frame = +2

Query: 44 STSFYISCNFRVAFE--------CLLLREGS*STFKMFLLLLPV------FSLHVHFCPW 181
+T YISCN V+F CL++ EG +F+LL+ ++ V F
Sbjct: 2 ATGHYISCNICVSFNEGLRLTLPCLIVLEG-----HIFMLLIMTTGHYISCNICVRFSGG 56

Query: 182 LWLAGRHLFWLDAHFF------KSFYISCNFRVAFECLLLREGS*STFEMFLLLLPVFS- 340
L LA L L+ H F Y+SC C+ EG T + +L + S
Sbjct: 57 LRLALPCLIVLEGHIFMLLIMTTGHYVSCG-----ACVSFNEGQRLTLPCLIFILVIMSP 111

Query: 341 -------LHVHFCPWLWLA 376
++V FC L LA
Sbjct: 112 DHYSSCCVYVGFCDALRLA 130


>tr|B6NX21|B6NX21_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_100131 PE=4 SV=1
Length = 279

Score = 34.7 bits (78), Expect = 3.8
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 25/125 (20%)
Frame = +2

Query: 29 LMLISSTSFYISCN--------FRVAFECLLLREGS*STFKMFLLLLPVF---SLHVHFC 175
++LI +T YISCN R+ CL++ EG F + ++ + F V F
Sbjct: 35 MLLIMATGHYISCNICVRFIGGLRLTLPCLIVLEG--HIFMILIMTIGHFISCGACVSFN 92

Query: 176 PWLWLAGRHLFWLDAHFF------KSFYISCN--------FRVAFECLLLREGS*STFEM 313
L L L L+ H F YISCN R+ CL++ EG +
Sbjct: 93 GGLRLTLPCLIVLEGHIFMLLIMATGHYISCNICVRFIGGLRLTLPCLIVLEG-----HI 147

Query: 314 FLLLL 328
F++L+
Sbjct: 148 FMILI 152


>tr|Q4YSF8|Q4YSF8_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB001633.02.0 PE=4 SV=1
Length = 753

Score = 33.9 bits (76), Expect = 6.5
Identities = 26/89 (29%), Positives = 41/89 (46%)
Frame = -1

Query: 392 LQVYDSPTTTKGKSARVVRRLEVEGETSRRYFNYPPSTIDIQKLLENCMKYKNS*RNEHQ 213
L++ D T K KS ++ LE E E S + + ++ +K+ + + E
Sbjct: 296 LKLADELETEKEKSLKLNDELETEKEKSVKLAD----ELETEKVRSAKLNDELETEKEKS 351

Query: 212 AKKGDDPPTTTKGKSARVVRRLEVEGETS 126
K DD T KG+S ++V LE E E S
Sbjct: 352 VKLADDELETEKGRSLKLVDELETEKEKS 380


>tr|A9V702|A9V702_MONBE Predicted protein OS=Monosiga brevicollis
GN=38323 PE=4 SV=1
Length = 4101

Score = 33.9 bits (76), Expect = 6.5
Identities = 27/89 (30%), Positives = 32/89 (35%)
Frame = +3

Query: 108 VVKVPSRCFSFYFQSSHYTCTFALGCGWRVVTFFGLMLISSRVFIFHAIFE*LLNVYC*G 287
V + PS C Y Q+ +C + CGW T F FHA + C
Sbjct: 1501 VAECPSPC---YQQNDCASCAALVECGWCATT--------QSCFPFHAYLSEYPSGGCLD 1549

Query: 288 RVVKVPSRCFSFYFQSSHYTCTFALGCGW 374
SRC YTCT A CGW
Sbjct: 1550 WQTDA-SRCSVCEAMDDCYTCTTAFECGW 1577


>tr|B6PKK4|B6PKK4_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_131930 PE=4 SV=1
Length = 1260

Score = 33.5 bits (75), Expect = 8.6
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1

Query: 434 ESYRCKP*KPKIPILQVYDSPTTTKGKSARVVRRLEVEGETSR 306
ES R P P+IPI+ + + T+GK +R +R L V+G ++
Sbjct: 1080 ESSRSSPGSPEIPIITIPKASRLTRGKGSRRLRYLFVDGSKAK 1122


>tr|B5DT69|B5DT69_DROPS GA23119 OS=Drosophila pseudoobscura
pseudoobscura GN=GA23119 PE=4 SV=1
Length = 119

Score = 33.5 bits (75), Expect = 8.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1

Query: 290 PPSTIDIQKLLENCMKYKNS*RNEHQAKKGDDPPTTTKGKSARVVRRL 147
P D+QK+ ++C R E A+ D P TT G+S+ RRL
Sbjct: 67 PEGVTDVQKMYDDCYAVYAQYRTEQSARAPDCPSHTTPGRSSVDFRRL 114