BP918468 |
Clone id |
YMU001_000113_G12 |
Library |
YMU01 |
Length |
202 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000113_G12. |
Accession |
BP918468 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCATGCTTCACATCATCGACAATTTTGATAGCAGTATCGCTAACCCTGTAAAACCACTG TGAGGTGAACCATGTGTCTTTCTTGTCATCCTCAAACATCTCAATAATTCGACCTATGAA GTCCTGCTCTCCTCCAGACTGGGAAAAACAAAAAATGCACATGCACACAATTTCCAGCTC ATAGGTAGTCCATCTACTTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94F88 |
Definition |
sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana |
Align length |
42 |
Score (bit) |
44.7 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4XTS9 |
Definition |
tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis guineensis var. tenera |
Align length |
44 |
Score (bit) |
48.5 |
E-value |
0.0002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918468|Adiantum capillus-veneris mRNA, clone: YMU001_000113_G12. (202 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis ... 49 2e-04 tr|A7PVZ4|A7PVZ4_VITVI Chromosome chr8 scaffold_34, whole genome... 48 3e-04 tr|Q4LB18|Q4LB18_HORVU Cytosine-specific methyltransferase (Frag... 47 6e-04 tr|A9STI8|A9STI8_PHYPA Predicted protein (Fragment) OS=Physcomit... 45 0.001 tr|Q0WN75|Q0WN75_ARATH Cytosine-specific methyltransferase OS=Ar... 45 0.002 tr|B8A9C3|B8A9C3_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|Q8SBB4|Q8SBB4_ORYSJ Cytosine-specific methyltransferase OS=Or... 44 0.005 tr|A3C1U4|A3C1U4_ORYSJ Cytosine-specific methyltransferase OS=Or... 44 0.005 tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vi... 43 0.007 tr|Q8H0H2|Q8H0H2_TOBAC Chromomethylase-like protein OS=Nicotiana... 42 0.012 tr|B1GYH3|B1GYH3_NICSY Chromomethylase OS=Nicotiana sylvestris G... 42 0.012 tr|Q8H854|Q8H854_ORYSJ Os03g0226800 protein OS=Oryza sativa subs... 42 0.020 tr|B8AJK7|B8AJK7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020 tr|Q05KC2|Q05KC2_BRACM Cytosine-specific methyltransferase OS=Br... 39 0.13 tr|O50037|O50037_CARAS Chromomethylase (Fragment) OS=Cardaminops... 39 0.13 tr|A7PBE9|A7PBE9_VITVI Cytosine-specific methyltransferase OS=Vi... 38 0.22 tr|B8AZD1|B8AZD1_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.37 tr|A3B1A3|A3B1A3_ORYSJ Cytosine-specific methyltransferase OS=Or... 37 0.37 tr|A7P020|A7P020_VITVI Cytosine-specific methyltransferase OS=Vi... 35 1.4 tr|O49144|O49144_ARASU Chromomethylase (Fragment) OS=Arabidopsis... 33 5.4 tr|A7P7P1|A7P7P1_VITVI Chromosome chr9 scaffold_7, whole genome ... 33 7.1 tr|A5ADT5|A5ADT5_VITVI Putative uncharacterized protein OS=Vitis... 33 7.1 tr|B6PZL3|B6PZL3_BRAFL Putative uncharacterized protein OS=Branc... 33 9.2
>tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 925
Score = 48.5 bits (114), Expect = 2e-04 Identities = 21/44 (47%), Positives = 28/44 (63%) Frame = -2
Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVDDVKHD 1 GE D+IGRI+E FE +F +QWF+R DT IK ++ HD Sbjct: 201 GEPDYIGRIVEFFETTDGQLYFAAQWFFRAEDTVIK---EIAHD 241
>tr|A7PVZ4|A7PVZ4_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025412001 PE=3 SV=1 Length = 816
Score = 47.8 bits (112), Expect = 3e-04 Identities = 18/36 (50%), Positives = 27/36 (75%) Frame = -2
Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25 G+ DFI +I+E+FE ++ +FT+QWF+R DT IK Sbjct: 103 GQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIK 138
>tr|Q4LB18|Q4LB18_HORVU Cytosine-specific methyltransferase (Fragment) OS=Hordeum vulgare GN=cmt1 PE=2 SV=1 Length = 735
Score = 46.6 bits (109), Expect = 6e-04 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 3/46 (6%) Frame = -2
Query: 129 EQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAI---KIVDDVKHD 1 E D+IGRI E FE K +FT +WF+R DT I K V+D HD Sbjct: 33 EADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAKFVNDHTHD 78
>tr|A9STI8|A9STI8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_135156 PE=3 SV=1 Length = 700
Score = 45.4 bits (106), Expect = 0.001 Identities = 21/44 (47%), Positives = 26/44 (59%) Frame = -2
Query: 138 SGGEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVDDVK 7 SG E FIGRI E +E + K WF +QWF+R DT + D K Sbjct: 22 SGLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTVSRNHDPKK 65
>tr|Q0WN75|Q0WN75_ARATH Cytosine-specific methyltransferase OS=Arabidopsis thaliana GN=At1g69770 PE=2 SV=1 Length = 839
Score = 44.7 bits (104), Expect = 0.002 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Frame = -2
Query: 147 FSQSG-GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25 + QSG G+ FI +IIEMFE +FT++WFYR SDT +K Sbjct: 117 YVQSGEGKDPFICKIIEMFEGANGKLYFTARWFYRPSDTVMK 158
>tr|B8A9C3|B8A9C3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02246 PE=4 SV=1 Length = 907
Score = 43.9 bits (102), Expect = 0.004 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Frame = -2
Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1 D+IGRI E FE +FT +WF+R DT I + DD KHD Sbjct: 190 DYIGRITEFFEGTDHCRYFTCRWFFRAEDTVISSIMMENADDEKHD 235
>tr|Q8SBB4|Q8SBB4_ORYSJ Cytosine-specific methyltransferase OS=Oryza sativa subsp. japonica GN=OSJNBa0071K19.15 PE=3 SV=1 Length = 719
Score = 43.5 bits (101), Expect = 0.005 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Frame = -2
Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1 D+IGRI E FE +FT +WF+R DT I + DD KHD Sbjct: 190 DYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHD 235
>tr|A3C1U4|A3C1U4_ORYSJ Cytosine-specific methyltransferase OS=Oryza sativa subsp. japonica GN=OsJ_029266 PE=3 SV=1 Length = 719
Score = 43.5 bits (101), Expect = 0.005 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Frame = -2
Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1 D+IGRI E FE +FT +WF+R DT I + DD KHD Sbjct: 190 DYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHD 235
>tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vitis vinifera GN=GSVIVT00003672001 PE=3 SV=1 Length = 997
Score = 43.1 bits (100), Expect = 0.007 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = -2
Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25 GEQ +GRI+E F+ + + +F QWFYR DT +K Sbjct: 296 GEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMK 331
>tr|Q8H0H2|Q8H0H2_TOBAC Chromomethylase-like protein OS=Nicotiana tabacum GN=A31 PE=2 SV=1 Length = 741
Score = 42.4 bits (98), Expect = 0.012 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -2
Query: 138 SGGEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVD 16 S E D+I +I+E F+ +FT+QWFYR DT IK D Sbjct: 40 SSDEDDYICKIVEFFQAVDGMQYFTAQWFYRAKDTVIKAHD 80
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