BP918468
Clone id YMU001_000113_G12
Library
Length 202
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTCATGCTTCACATCATCGACAATTTTGATAGCAGTATCGCTAACCCTGTAAAACCACTG
TGAGGTGAACCATGTGTCTTTCTTGTCATCCTCAAACATCTCAATAATTCGACCTATGAA
GTCCTGCTCTCCTCCAGACTGGGAAAAACAAAAAATGCACATGCACACAATTTCCAGCTC
ATAGGTAGTCCATCTACTTCTG
■■Homology search results ■■ -
sp_hit_id Q94F88
Definition sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
Align length 42
Score (bit) 44.7
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918468|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_G12.
(202 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=... 45 1e-04
sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea... 44 3e-04
sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea... 44 3e-04
sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea... 43 4e-04
sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase... 33 0.34
sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus GN=S... 29 6.4
sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus nige... 29 8.4
sp|Q7VUH0|ISPE_BORPE 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 29 8.4
sp|Q7W182|ISPE_BORPA 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 29 8.4
sp|Q7WNY5|ISPE_BORBR 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 29 8.4

>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3
OS=Arabidopsis thaliana GN=CMT3 PE=1 SV=2
Length = 839

Score = 44.7 bits (104), Expect = 1e-04
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -2

Query: 147 FSQSG-GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25
+ QSG G+ FI +IIEMFE +FT++WFYR SDT +K
Sbjct: 117 YVQSGEGKDPFICKIIEMFEGANGKLYFTARWFYRPSDTVMK 158


>sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea
mays GN=DMT105 PE=2 SV=1
Length = 915

Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2

Query: 129 EQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKI-----VDDVKHD 1
E D+IGRI E FE + +FT +WF+R DT I VD KHD
Sbjct: 204 EADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGHKHD 251


>sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea
mays GN=ZMET5 PE=2 SV=1
Length = 915

Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2

Query: 129 EQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKI-----VDDVKHD 1
E D+IGRI E FE + +FT +WF+R DT I VD KHD
Sbjct: 204 EADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGHKHD 251


>sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea
mays GN=MET2A PE=1 SV=1
Length = 912

Score = 43.1 bits (100), Expect = 4e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2

Query: 129 EQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK-----IVDDVKHD 1
E D+IGRI E FE + +FT +WF+R DT I VD KHD
Sbjct: 200 EADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHD 247


>sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase
CMT1 OS=Arabidopsis thaliana GN=CMT1 PE=5 SV=2
Length = 791

Score = 33.5 bits (75), Expect = 0.34
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2

Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25
G+ FI ++IE+FE D + +W+YR DT I+
Sbjct: 94 GKLKFIAKVIELFEADDGVPYCRFRWYYRPEDTLIE 129


>sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus
GN=Serinc5 PE=2 SV=1
Length = 461

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2

Query: 201 RSRWTTYELEIVCMCIFCFSQSGG---EQDFIGRIIEMFEDDKKDTWFTSQWFYRV 43
+SR+ ELE V C FCF G EQ + + + D+KK T ++ +F+ V
Sbjct: 343 QSRYGAPELE-VARCCFCFGPDGEDTEEQQNVKKGPRVIYDEKKGTVYSYSYFHFV 397


>sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=dcl2-2 PE=3 SV=2
Length = 1362

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2

Query: 2 SCFTSSTILIAVSLTL*NHCEVNHVSFLSSSNISIIRPMKSCSPPDWEKQKMHMHTISS 178
S FT++T L +++T E NH+ N+ + + +CS W+ ++H +S+
Sbjct: 1146 SAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVH--KNVTTCSIRLWDFLRLHSDALST 1202


>sp|Q7VUH0|ISPE_BORPE 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Bordetella pertussis GN=ispE PE=3 SV=1
Length = 299

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3

Query: 164 ACAFFVFPSLEESRTS*VELLRCLRMTRKTHGSPHSGF 51
AC F FP+L E+ + E+ +R+ KT H GF
Sbjct: 242 ACLFAEFPTLPEAVLAQEEITATMRVAGKTTSHTHPGF 279


>sp|Q7W182|ISPE_BORPA 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Bordetella parapertussis GN=ispE PE=3 SV=1
Length = 299

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3

Query: 164 ACAFFVFPSLEESRTS*VELLRCLRMTRKTHGSPHSGF 51
AC F FP+L E+ + E+ +R+ KT H GF
Sbjct: 242 ACLFAEFPTLPEAVLAQEEITATMRVAGKTTSHTHPGF 279


>sp|Q7WNY5|ISPE_BORBR 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Bordetella bronchiseptica GN=ispE PE=3 SV=1
Length = 299

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3

Query: 164 ACAFFVFPSLEESRTS*VELLRCLRMTRKTHGSPHSGF 51
AC F FP+L E+ + E+ +R+ KT H GF
Sbjct: 242 ACLFAEFPTLPEAVLAQEEITATMRVAGKTTSHTHPGF 279


tr_hit_id B4XTS9
Definition tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis guineensis var. tenera
Align length 44
Score (bit) 48.5
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918468|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_G12.
(202 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis ... 49 2e-04
tr|A7PVZ4|A7PVZ4_VITVI Chromosome chr8 scaffold_34, whole genome... 48 3e-04
tr|Q4LB18|Q4LB18_HORVU Cytosine-specific methyltransferase (Frag... 47 6e-04
tr|A9STI8|A9STI8_PHYPA Predicted protein (Fragment) OS=Physcomit... 45 0.001
tr|Q0WN75|Q0WN75_ARATH Cytosine-specific methyltransferase OS=Ar... 45 0.002
tr|B8A9C3|B8A9C3_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004
tr|Q8SBB4|Q8SBB4_ORYSJ Cytosine-specific methyltransferase OS=Or... 44 0.005
tr|A3C1U4|A3C1U4_ORYSJ Cytosine-specific methyltransferase OS=Or... 44 0.005
tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vi... 43 0.007
tr|Q8H0H2|Q8H0H2_TOBAC Chromomethylase-like protein OS=Nicotiana... 42 0.012
tr|B1GYH3|B1GYH3_NICSY Chromomethylase OS=Nicotiana sylvestris G... 42 0.012
tr|Q8H854|Q8H854_ORYSJ Os03g0226800 protein OS=Oryza sativa subs... 42 0.020
tr|B8AJK7|B8AJK7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020
tr|Q05KC2|Q05KC2_BRACM Cytosine-specific methyltransferase OS=Br... 39 0.13
tr|O50037|O50037_CARAS Chromomethylase (Fragment) OS=Cardaminops... 39 0.13
tr|A7PBE9|A7PBE9_VITVI Cytosine-specific methyltransferase OS=Vi... 38 0.22
tr|B8AZD1|B8AZD1_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.37
tr|A3B1A3|A3B1A3_ORYSJ Cytosine-specific methyltransferase OS=Or... 37 0.37
tr|A7P020|A7P020_VITVI Cytosine-specific methyltransferase OS=Vi... 35 1.4
tr|O49144|O49144_ARASU Chromomethylase (Fragment) OS=Arabidopsis... 33 5.4
tr|A7P7P1|A7P7P1_VITVI Chromosome chr9 scaffold_7, whole genome ... 33 7.1
tr|A5ADT5|A5ADT5_VITVI Putative uncharacterized protein OS=Vitis... 33 7.1
tr|B6PZL3|B6PZL3_BRAFL Putative uncharacterized protein OS=Branc... 33 9.2

>tr|B4XTS9|B4XTS9_ELAGV CMT-type DNA-methyltransferase OS=Elaeis
guineensis var. tenera PE=2 SV=1
Length = 925

Score = 48.5 bits (114), Expect = 2e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -2

Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVDDVKHD 1
GE D+IGRI+E FE +F +QWF+R DT IK ++ HD
Sbjct: 201 GEPDYIGRIVEFFETTDGQLYFAAQWFFRAEDTVIK---EIAHD 241


>tr|A7PVZ4|A7PVZ4_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025412001
PE=3 SV=1
Length = 816

Score = 47.8 bits (112), Expect = 3e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = -2

Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25
G+ DFI +I+E+FE ++ +FT+QWF+R DT IK
Sbjct: 103 GQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIK 138


>tr|Q4LB18|Q4LB18_HORVU Cytosine-specific methyltransferase
(Fragment) OS=Hordeum vulgare GN=cmt1 PE=2 SV=1
Length = 735

Score = 46.6 bits (109), Expect = 6e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -2

Query: 129 EQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAI---KIVDDVKHD 1
E D+IGRI E FE K +FT +WF+R DT I K V+D HD
Sbjct: 33 EADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAKFVNDHTHD 78


>tr|A9STI8|A9STI8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_135156 PE=3 SV=1
Length = 700

Score = 45.4 bits (106), Expect = 0.001
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -2

Query: 138 SGGEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVDDVK 7
SG E FIGRI E +E + K WF +QWF+R DT + D K
Sbjct: 22 SGLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTVSRNHDPKK 65


>tr|Q0WN75|Q0WN75_ARATH Cytosine-specific methyltransferase
OS=Arabidopsis thaliana GN=At1g69770 PE=2 SV=1
Length = 839

Score = 44.7 bits (104), Expect = 0.002
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -2

Query: 147 FSQSG-GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25
+ QSG G+ FI +IIEMFE +FT++WFYR SDT +K
Sbjct: 117 YVQSGEGKDPFICKIIEMFEGANGKLYFTARWFYRPSDTVMK 158


>tr|B8A9C3|B8A9C3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02246 PE=4 SV=1
Length = 907

Score = 43.9 bits (102), Expect = 0.004
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -2

Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1
D+IGRI E FE +FT +WF+R DT I + DD KHD
Sbjct: 190 DYIGRITEFFEGTDHCRYFTCRWFFRAEDTVISSIMMENADDEKHD 235


>tr|Q8SBB4|Q8SBB4_ORYSJ Cytosine-specific methyltransferase OS=Oryza
sativa subsp. japonica GN=OSJNBa0071K19.15 PE=3 SV=1
Length = 719

Score = 43.5 bits (101), Expect = 0.005
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -2

Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1
D+IGRI E FE +FT +WF+R DT I + DD KHD
Sbjct: 190 DYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHD 235


>tr|A3C1U4|A3C1U4_ORYSJ Cytosine-specific methyltransferase OS=Oryza
sativa subsp. japonica GN=OsJ_029266 PE=3 SV=1
Length = 719

Score = 43.5 bits (101), Expect = 0.005
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -2

Query: 123 DFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIV-----DDVKHD 1
D+IGRI E FE +FT +WF+R DT I + DD KHD
Sbjct: 190 DYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHD 235


>tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vitis
vinifera GN=GSVIVT00003672001 PE=3 SV=1
Length = 997

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2

Query: 132 GEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIK 25
GEQ +GRI+E F+ + + +F QWFYR DT +K
Sbjct: 296 GEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMK 331


>tr|Q8H0H2|Q8H0H2_TOBAC Chromomethylase-like protein OS=Nicotiana
tabacum GN=A31 PE=2 SV=1
Length = 741

Score = 42.4 bits (98), Expect = 0.012
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -2

Query: 138 SGGEQDFIGRIIEMFEDDKKDTWFTSQWFYRVSDTAIKIVD 16
S E D+I +I+E F+ +FT+QWFYR DT IK D
Sbjct: 40 SSDEDDYICKIVEFFQAVDGMQYFTAQWFYRAKDTVIKAHD 80