BP918475
Clone id YMU001_000113_H07
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000113_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATTCGCGGCCGCGAATTCTTCCAGTTGCCGCAGGAATTTTTTTTTTTTTTTTGGAACCA
AAATGTCATCAATAGAATAGATAGAAATAGCACTAATTCATATGTGTTCTACACATGGTA
ATACCATTATTTATCATTCTCCATTATAATTCTCAGTATCCACTTTGCAAATCCAATATG
CTGATCATCTCAATGCATAGAAATCATGCAAAACTGCCCTTTACAAAAAACCTCCATTTA
TTTCTTTCCTTCTAAATGGAGGACAGATTTTTCTAAGTGTGTGTCCAAAGTAGGCTGTGT
GATTTTTTCACCTTCTTTGGCAGGTACAGGTGGCTTGGAACACTTGAAGCCCTTCAAGAC
CGAACCCAGCTGGGGTACTCCACGTCAAGAGAACTGCAAGTAACTCTCAAGGGTTTCCTT
CAGCAGGCTCAATAATAAACATATTGCCAGAGCTCTGAATACAAAAAGGCTCAACCCACG
TGAGTGGGCC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918475|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_H07.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9GKE2
Definition tr|Q9GKE2|Q9GKE2_PIG SR-PSOX OS=Sus scrofa
Align length 46
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918475|Adiantum capillus-veneris mRNA, clone:
YMU001_000113_H07.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9GKE2|Q9GKE2_PIG SR-PSOX OS=Sus scrofa PE=2 SV=1 36 1.1

>tr|Q9GKE2|Q9GKE2_PIG SR-PSOX OS=Sus scrofa PE=2 SV=1
Length = 250

Score = 35.8 bits (81), Expect = 1.1
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1

Query: 350 LLAVLLTWSTPAGFGLEGLQVFQATCTCQRR*KNHTAYFGHTLRKI 213
LLA+ L W TP G G EG +C C RR +H+ H +R +
Sbjct: 10 LLALFLAWLTPPGNGNEGSMA--GSCPCNRRISSHSPPTDHDMRHL 53