BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918477|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_A02.
         (327 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS...    30   5.0  
sp|P04371|COX1_TRYBB Cytochrome c oxidase subunit 1 OS=Trypanoso...    29   6.5  

>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A
           OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1
          Length = 421

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 272 NALSRGWSKFGNSKSLRALENICLSTKMQSHL 177
           N  +  W +FGN +S+R+L ++ L+  ++S L
Sbjct: 168 NGGNGNWERFGNPRSIRSLSSVILADDLKSKL 199


>sp|P04371|COX1_TRYBB Cytochrome c oxidase subunit 1 OS=Trypanosoma
           brucei brucei GN=COXI PE=3 SV=1
          Length = 549

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +2

Query: 59  GWSSFPHFVMIPFH*LTVPSLNC--IIPSSHVWSSFAISSSVN--GFAF*C*GRYFLVL 223
           GW+ +P  + I FH     SL C  II S H     +I +S+N  G  F C  +YF  L
Sbjct: 128 GWTLYPTLICIDFH----SSLACDFIIFSVHFLGISSILNSINVVGTIFCCRRKYFSFL 182

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918477|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_A02.
         (327 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FWN1|B7FWN1_PHATR Predicted protein (Fragment) OS=Phaeodact...    33   5.4  
tr|Q3AYL7|Q3AYL7_SYNS9 Putative uncharacterized protein OS=Synec...    33   7.0  
tr|Q9GBH4|Q9GBH4_9BIVA Cytochrome c oxidase subunit 1 (Fragment)...    33   7.0  

>tr|B7FWN1|B7FWN1_PHATR Predicted protein (Fragment)
           OS=Phaeodactylum tricornutum CCAP 1055/1
           GN=PHATRDRAFT_26775 PE=4 SV=1
          Length = 593

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = -1

Query: 141 LDGIIQFKLGTVN*WKG--IITKCGKLDHPVRKNLVDGEWSLLGRGK 7
           +DG ++ K G  + W G  +I  C +LD+   +N++DG+   +GRG+
Sbjct: 188 VDGTVRQKNGNPDVWYGRSVIKSCARLDYATAQNIIDGK---VGRGE 231


>tr|Q3AYL7|Q3AYL7_SYNS9 Putative uncharacterized protein
           OS=Synechococcus sp. (strain CC9902) GN=Syncc9902_0844
           PE=4 SV=1
          Length = 403

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 273 QCSVSWLEQIWKL*EPESTRKYLPQH*NAKPFTEDEMAKDDHTWLDGIIQFK 118
           Q S+ WLE++W++ +P     +L Q  +  PF + E+ +    WL G+   K
Sbjct: 340 QRSLQWLEELWRVLQPLCPGVHLAQLHDHLPFHQRELEQAFGGWLPGLKSLK 391


>tr|Q9GBH4|Q9GBH4_9BIVA Cytochrome c oxidase subunit 1 (Fragment)
           OS=Barbatia fusca GN=co1 PE=3 SV=1
          Length = 302

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +2

Query: 56  TGWSSFPHFVMIPFH*LTVPSLNCIIPSSHVWSSFAISSSVNGFAF*C*GRYFLVL 223
           TGW+ +P    I FH  + P+++ +I S H+    +I SS+N  +    GR+F +L
Sbjct: 43  TGWTLYPPLSSIEFH--SSPAVDLVIFSLHIAGLASIFSSMNFMSTAVGGRFFNLL 96