BP918483 |
Clone id |
YMU001_000114_A08 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_A08. |
Accession |
BP918483 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2289Contig1 |
Sequence |
AAATTAGTAGCATTCACCCCGAACAATATAAATACACCAGACAATCTAAGTAGCAGCCCT TTTTGTTAAAGGGCGTACATCAATTACTATACTTGTCCTCCAAAGCCCCGTCATTCTTCA TCTCTCAAACTGCTGTGAACTGTGGTGGCAGATGTTGGTTCATGCGCAACTGTTGTGCAT ACACCCATGTGTTGAACAAGCAATCCTCAAAGGCCAAGGAGTCGATGTATACTCTCAATT ATACAGCTATCCACATATTAAATGATGATGGGAGCAGAACTGCTTTTTCTGCCGCGTTTT CTCCGAGGATTTGCCTCAAGAGAGCAAAAGTTCACCACATTACTTTCCTCACAAATAACG ATGTTTGCCCCTGCAGGATTCTCCAGCAACATCTTGGAGACAAGATAACCCGCGACAGAC CATGTCTGATAAAGCCGAGACTGTTTTCCAATAAATCGTCCTGTACGAGTATCATAATAC TCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C501 |
Definition |
sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana |
Align length |
104 |
Score (bit) |
34.7 |
E-value |
0.23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QBF0 |
Definition |
tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
77 |
Score (bit) |
93.6 |
E-value |
4.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918483|Adiantum capillus-veneris mRNA, clone: YMU001_000114_A08. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genom... 94 4e-18 tr|Q9FK88|Q9FK88_ARATH At5g22510 OS=Arabidopsis thaliana GN=At5g... 92 2e-17 tr|Q8H975|Q8H975_TOBAC Invertase (Fragment) OS=Nicotiana tabacum... 89 1e-16 tr|A7PQG4|A7PQG4_VITVI Chromosome chr6 scaffold_25, whole genome... 88 2e-16 tr|Q56UM2|Q56UM2_ORYSI Neutral/alkaline invertase 1 (Fragment) O... 85 2e-15 tr|Q10MC0|Q10MC0_ORYSJ Os03g0314800 protein OS=Oryza sativa subs... 85 2e-15 tr|A9RKW9|A9RKW9_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15 tr|A3AHC3|A3AHC3_ORYSJ Putative uncharacterized protein OS=Oryza... 83 8e-15 tr|B8AMY9|B8AMY9_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|B8AMY8|B8AMY8_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|A9IVZ2|A9IVZ2_VITVI Putative neutral invertase OS=Vitis vinif... 81 3e-14 tr|A9IVY1|A9IVY1_VITVI Putative neutral invertase OS=Vitis vinif... 81 3e-14 tr|A7PRN8|A7PRN8_VITVI Chromosome chr14 scaffold_27, whole genom... 81 3e-14 tr|A7LH71|A7LH71_VITVI Neutral invertase OS=Vitis vinifera GN=NI... 80 4e-14 tr|A9IVX2|A9IVX2_VITVI Putative neutral invertase OS=Vitis vinif... 80 5e-14 tr|A9IVW3|A9IVW3_VITVI Putative neutral invertase OS=Vitis vinif... 80 5e-14 tr|A7Q8U5|A7Q8U5_VITVI Chromosome chr5 scaffold_64, whole genome... 80 5e-14 tr|A5B5N8|A5B5N8_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|Q6JJ23|Q6JJ23_IPOTF Putative neutral invertase OS=Ipomoea tri... 80 7e-14 tr|A0PAD6|A0PAD6_IPOTF Putative uncharacterized protein OS=Ipomo... 80 7e-14 tr|Q5ZA27|Q5ZA27_ORYSJ Neutral invertase-like protein OS=Oryza s... 79 1e-13 tr|Q5ZA22|Q5ZA22_ORYSJ cDNA clone:J023002G12, full insert sequen... 79 1e-13 tr|Q56UM1|Q56UM1_ORYSI Neutral/alkaline invertase 2 (Fragment) O... 79 1e-13 tr|A2ZSM4|A2ZSM4_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|A0AQX5|A0AQX5_PRUPE Putative neutral invertase (Fragment) OS=... 79 1e-13 tr|Q84XG8|Q84XG8_ORYSI Invertase OS=Oryza sativa subsp. indica G... 78 2e-13 tr|A2WPE3|A2WPE3_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|Q9FXA8|Q9FXA8_ARATH Putative invertase (At1g56560) (Putative ... 78 2e-13 tr|Q8L6W3|Q8L6W3_BETVU Neutral invertase OS=Beta vulgaris GN=nin... 77 4e-13 tr|Q9ZR47|Q9ZR47_DAUCA Neutral invertase OS=Daucus carota PE=2 SV=1 75 2e-12
>tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034936001 PE=4 SV=1 Length = 651
Score = 93.6 bits (231), Expect = 4e-18 Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 3/77 (3%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEE-SNVVN--FCSLEA 312 EYYDT+ RFIGKQ+ L+QTWS+AGYLV+K+LL +P A I+I EE S +VN C + A Sbjct: 575 EYYDTKKARFIGKQACLFQTWSIAGYLVAKLLLSDPTAAKILITEEDSELVNAFSCMISA 634
Query: 311 NPRRKRGRKSSSAPIII 261 NPRRKRGRKSS+ I+ Sbjct: 635 NPRRKRGRKSSTQTFIV 651
>tr|Q9FK88|Q9FK88_ARATH At5g22510 OS=Arabidopsis thaliana GN=At5g22510 PE=2 SV=1 Length = 617
Score = 91.7 bits (226), Expect = 2e-17 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 3/77 (3%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVVN---FCSLEA 312 EYYDT+ RFIGKQ+RLYQTWS+AGYLV+K+LL NPA A + EE + + C L A Sbjct: 541 EYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMLSA 600
Query: 311 NPRRKRGRKSSSAPIII 261 NPRR RG K + P I+ Sbjct: 601 NPRRTRGPKKAQQPFIV 617
>tr|Q8H975|Q8H975_TOBAC Invertase (Fragment) OS=Nicotiana tabacum GN=NtINV2 PE=2 SV=1 Length = 117
Score = 89.0 bits (219), Expect = 1e-16 Identities = 42/70 (60%), Positives = 57/70 (81%), Gaps = 3/70 (4%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVIC-EESNVVN--FCSLEA 312 EYYDT+ RF+GKQ+RL+QTWS+AGYLV+K+LL NP+ A I+I E+S ++N C++ + Sbjct: 47 EYYDTKKARFVGKQARLFQTWSIAGYLVAKLLLANPSAAKILITQEDSELLNAFSCAISS 106
Query: 311 NPRRKRGRKS 282 NPRRKRG KS Sbjct: 107 NPRRKRGPKS 116
>tr|A7PQG4|A7PQG4_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022057001 PE=4 SV=1 Length = 639
Score = 87.8 bits (216), Expect = 2e-16 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 3/77 (3%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVI-CEESNVVNFCS--LEA 312 EYYDT+ GRFIGKQ+RL+QTWS+AGYLVSK+LL NP ANI++ E+S++V+ S L A Sbjct: 563 EYYDTKQGRFIGKQARLFQTWSIAGYLVSKLLLANPDAANILVNREDSDLVSAFSSMLSA 622
Query: 311 NPRRKRGRKSSSAPIII 261 NPRRKR K I+ Sbjct: 623 NPRRKRDWKGLKQKFIV 639
>tr|Q56UM2|Q56UM2_ORYSI Neutral/alkaline invertase 1 (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 149
Score = 85.1 bits (209), Expect = 2e-15 Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 3/77 (3%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312 EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+ Sbjct: 73 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 132
Query: 311 NPRRKRGRKSSSAPIII 261 + R K R+++ + +++ Sbjct: 133 SARTKCSRRAARSQVLV 149
>tr|Q10MC0|Q10MC0_ORYSJ Os03g0314800 protein OS=Oryza sativa subsp. japonica GN=Os03g0314800 PE=4 SV=1 Length = 628
Score = 85.1 bits (209), Expect = 2e-15 Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 3/77 (3%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312 EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+ Sbjct: 552 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 611
Query: 311 NPRRKRGRKSSSAPIII 261 + R K R+++ + +++ Sbjct: 612 SARTKCSRRAARSQVLV 628
>tr|A9RKW9|A9RKW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_203483 PE=4 SV=1 Length = 606
Score = 84.0 bits (206), Expect = 3e-15 Identities = 42/68 (61%), Positives = 50/68 (73%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVVNFCSLEANPR 303 EYYDT+ GRFIGKQ+RLYQTWS+AGYL SK+L +NP AN + CEE + LEANP Sbjct: 534 EYYDTKKGRFIGKQARLYQTWSIAGYLTSKLLSKNPDAANWLTCEEDDHYAIL-LEANPN 592
Query: 302 RKRGRKSS 279 KR K+S Sbjct: 593 LKRKFKAS 600
>tr|A3AHC3|A3AHC3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010195 PE=4 SV=1 Length = 704
Score = 82.8 bits (203), Expect = 8e-15 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 3/75 (4%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312 EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+ Sbjct: 503 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 562
Query: 311 NPRRKRGRKSSSAPI 267 + R K R+++ + + Sbjct: 563 SARTKCSRRAARSQL 577
>tr|B8AMY9|B8AMY9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11303 PE=4 SV=1 Length = 298
Score = 82.4 bits (202), Expect = 1e-14 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 3/71 (4%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312 EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+ Sbjct: 167 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 226
Query: 311 NPRRKRGRKSS 279 + R K R+++ Sbjct: 227 SARTKCSRRAA 237
>tr|B8AMY8|B8AMY8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11302 PE=4 SV=1 Length = 683
Score = 82.4 bits (202), Expect = 1e-14 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 3/71 (4%) Frame = -3
Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312 EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+ Sbjct: 552 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 611
Query: 311 NPRRKRGRKSS 279 + R K R+++ Sbjct: 612 SARTKCSRRAA 622
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