BP918483
Clone id YMU001_000114_A08
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAATTAGTAGCATTCACCCCGAACAATATAAATACACCAGACAATCTAAGTAGCAGCCCT
TTTTGTTAAAGGGCGTACATCAATTACTATACTTGTCCTCCAAAGCCCCGTCATTCTTCA
TCTCTCAAACTGCTGTGAACTGTGGTGGCAGATGTTGGTTCATGCGCAACTGTTGTGCAT
ACACCCATGTGTTGAACAAGCAATCCTCAAAGGCCAAGGAGTCGATGTATACTCTCAATT
ATACAGCTATCCACATATTAAATGATGATGGGAGCAGAACTGCTTTTTCTGCCGCGTTTT
CTCCGAGGATTTGCCTCAAGAGAGCAAAAGTTCACCACATTACTTTCCTCACAAATAACG
ATGTTTGCCCCTGCAGGATTCTCCAGCAACATCTTGGAGACAAGATAACCCGCGACAGAC
CATGTCTGATAAAGCCGAGACTGTTTTCCAATAAATCGTCCTGTACGAGTATCATAATAC
TCCG
■■Homology search results ■■ -
sp_hit_id Q9C501
Definition sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana
Align length 104
Score (bit) 34.7
E-value 0.23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918483|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_A08.
(484 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protei... 35 0.23
sp|P21012|VD10_VACCC mRNA-decapping protein D10 OS=Vaccinia viru... 32 2.0
sp|P04312|VD10_VACCW mRNA-decapping protein D10 OS=Vaccinia viru... 31 2.6
sp|P33071|VD10_VARV mRNA-decapping protein D10 OS=Variola virus ... 30 4.4
sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo ... 30 5.7
sp|Q54DN3|XPO7_DICDI Exportin-7 OS=Dictyostelium discoideum GN=x... 30 5.7
sp|P23665|GUNA_FIBSU Endoglucanase A OS=Fibrobacter succinogenes... 30 5.7

>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein
At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538

Score = 34.7 bits (78), Expect = 0.23
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +3

Query: 63 LLKGVHQLLYLSSKAPSFFISQTAVNCGGRCWFMRNCCAYTHVLNKQSSKAKESMYTLNY 242
L KG+H Y + F+S + V+ G+C + + + +K+S A SM +N
Sbjct: 278 LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSM--INC 335

Query: 243 TAIHILNDDGSRTAFSAAFSP--RICLKRAKVHHITFLTNNDVC 368
A+H G A F ++ + K HITF+ + C
Sbjct: 336 FALH-----GRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374


>sp|P21012|VD10_VACCC mRNA-decapping protein D10 OS=Vaccinia virus
(strain Copenhagen) GN=D10R PE=3 SV=1
Length = 248

Score = 31.6 bits (70), Expect = 2.0
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3

Query: 255 ILNDDGSRTAFSAAFSPRI--CLKRAKVHHITFLTNNDVCPCRILQQHLGDKITRDRPCL 428
I+ +D S+ AF + C KR V I T+N + C L +I R R
Sbjct: 23 IICEDDSQIITLTAFVNQCLWCHKRVSVSAILLTTDNKILVCNRRDSFLYSEIIRTRNMF 82

Query: 429 IKPRLFSNKSSCTS 470
K RLF N S+ S
Sbjct: 83 RKKRLFLNYSNYLS 96


>sp|P04312|VD10_VACCW mRNA-decapping protein D10 OS=Vaccinia virus
(strain Western Reserve) GN=D10R PE=1 SV=1
Length = 248

Score = 31.2 bits (69), Expect = 2.6
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3

Query: 255 ILNDDGSRTAFSAAFSPRI--CLKRAKVHHITFLTNNDVCPCRILQQHLGDKITRDRPCL 428
I+ +D S+ AF + C KR V I T+N + C L +I R R
Sbjct: 23 IICEDDSQIITLTAFVNQCLWCHKRVSVSAILLTTDNKILVCNRRDSFLYSEIIRTRNMF 82

Query: 429 IKPRLFSNKSS 461
K RLF N S+
Sbjct: 83 RKKRLFLNYSN 93


>sp|P33071|VD10_VARV mRNA-decapping protein D10 OS=Variola virus
GN=D10R PE=3 SV=1
Length = 248

Score = 30.4 bits (67), Expect = 4.4
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3

Query: 255 ILNDDGSRTAFSAAFSPRI--CLKRAKVHHITFLTNNDVCPCRILQQHLGDKITRDRPCL 428
I+ +D S+ AF + C KR V I T+N + C L +I R R
Sbjct: 23 IICEDDSQIITLTAFVNQCLWCHKRVSVSAILLTTDNKILVCNRRDSFLYSEIIRTRNMS 82

Query: 429 IKPRLFSNKSS 461
K RLF N S+
Sbjct: 83 RKKRLFLNYSN 93


>sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo
sapiens GN=TATDN2 PE=1 SV=2
Length = 761

Score = 30.0 bits (66), Expect = 5.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1

Query: 10 AFTPNNINTPDNLSSSPFC*RAYINYYTCPPKP 108
+FT + + P +L SSP+C Y +Y+T PKP
Sbjct: 362 SFTTDYVMYPPHLYSSPWC--DYASYWTSSPKP 392


>sp|Q54DN3|XPO7_DICDI Exportin-7 OS=Dictyostelium discoideum GN=xpo7
PE=3 SV=2
Length = 1007

Score = 30.0 bits (66), Expect = 5.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3

Query: 419 SVAGYLVSKMLLENPAGANIVICEESNVVNFCSLEANPRRK 297
SV G+ SKML++N +I+ S V F +NPR +
Sbjct: 562 SVNGHSTSKMLIDNKITKDILKTHSSQVFPFLEKNSNPRNR 602


>sp|P23665|GUNA_FIBSU Endoglucanase A OS=Fibrobacter succinogenes
GN=endA PE=1 SV=1
Length = 453

Score = 30.0 bits (66), Expect = 5.7
Identities = 19/95 (20%), Positives = 39/95 (41%)
Frame = +3

Query: 72 GVHQLLYLSSKAPSFFISQTAVNCGGRCWFMRNCCAYTHVLNKQSSKAKESMYTLNYTAI 251
GV L+Y F + + G + + A+ + L+ + + E M +
Sbjct: 330 GVLDLIYEEKAKDKIFQNPNGMGSGKFPVRVPSGGAFLYALSDKFNNTNEHMEMIEKNVS 389

Query: 252 HILNDDGSRTAFSAAFSPRICLKRAKVHHITFLTN 356
++L D+GS+ ++ FS ++ HH + N
Sbjct: 390 YLLGDNGSKKSYVVGFSKNGANAPSRPHHRGYYAN 424


tr_hit_id A7QBF0
Definition tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera
Align length 77
Score (bit) 93.6
E-value 4.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918483|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_A08.
(484 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genom... 94 4e-18
tr|Q9FK88|Q9FK88_ARATH At5g22510 OS=Arabidopsis thaliana GN=At5g... 92 2e-17
tr|Q8H975|Q8H975_TOBAC Invertase (Fragment) OS=Nicotiana tabacum... 89 1e-16
tr|A7PQG4|A7PQG4_VITVI Chromosome chr6 scaffold_25, whole genome... 88 2e-16
tr|Q56UM2|Q56UM2_ORYSI Neutral/alkaline invertase 1 (Fragment) O... 85 2e-15
tr|Q10MC0|Q10MC0_ORYSJ Os03g0314800 protein OS=Oryza sativa subs... 85 2e-15
tr|A9RKW9|A9RKW9_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15
tr|A3AHC3|A3AHC3_ORYSJ Putative uncharacterized protein OS=Oryza... 83 8e-15
tr|B8AMY9|B8AMY9_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14
tr|B8AMY8|B8AMY8_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14
tr|A9IVZ2|A9IVZ2_VITVI Putative neutral invertase OS=Vitis vinif... 81 3e-14
tr|A9IVY1|A9IVY1_VITVI Putative neutral invertase OS=Vitis vinif... 81 3e-14
tr|A7PRN8|A7PRN8_VITVI Chromosome chr14 scaffold_27, whole genom... 81 3e-14
tr|A7LH71|A7LH71_VITVI Neutral invertase OS=Vitis vinifera GN=NI... 80 4e-14
tr|A9IVX2|A9IVX2_VITVI Putative neutral invertase OS=Vitis vinif... 80 5e-14
tr|A9IVW3|A9IVW3_VITVI Putative neutral invertase OS=Vitis vinif... 80 5e-14
tr|A7Q8U5|A7Q8U5_VITVI Chromosome chr5 scaffold_64, whole genome... 80 5e-14
tr|A5B5N8|A5B5N8_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14
tr|Q6JJ23|Q6JJ23_IPOTF Putative neutral invertase OS=Ipomoea tri... 80 7e-14
tr|A0PAD6|A0PAD6_IPOTF Putative uncharacterized protein OS=Ipomo... 80 7e-14
tr|Q5ZA27|Q5ZA27_ORYSJ Neutral invertase-like protein OS=Oryza s... 79 1e-13
tr|Q5ZA22|Q5ZA22_ORYSJ cDNA clone:J023002G12, full insert sequen... 79 1e-13
tr|Q56UM1|Q56UM1_ORYSI Neutral/alkaline invertase 2 (Fragment) O... 79 1e-13
tr|A2ZSM4|A2ZSM4_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|A0AQX5|A0AQX5_PRUPE Putative neutral invertase (Fragment) OS=... 79 1e-13
tr|Q84XG8|Q84XG8_ORYSI Invertase OS=Oryza sativa subsp. indica G... 78 2e-13
tr|A2WPE3|A2WPE3_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13
tr|Q9FXA8|Q9FXA8_ARATH Putative invertase (At1g56560) (Putative ... 78 2e-13
tr|Q8L6W3|Q8L6W3_BETVU Neutral invertase OS=Beta vulgaris GN=nin... 77 4e-13
tr|Q9ZR47|Q9ZR47_DAUCA Neutral invertase OS=Daucus carota PE=2 SV=1 75 2e-12

>tr|A7QBF0|A7QBF0_VITVI Chromosome chr13 scaffold_74, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034936001
PE=4 SV=1
Length = 651

Score = 93.6 bits (231), Expect = 4e-18
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEE-SNVVN--FCSLEA 312
EYYDT+ RFIGKQ+ L+QTWS+AGYLV+K+LL +P A I+I EE S +VN C + A
Sbjct: 575 EYYDTKKARFIGKQACLFQTWSIAGYLVAKLLLSDPTAAKILITEEDSELVNAFSCMISA 634

Query: 311 NPRRKRGRKSSSAPIII 261
NPRRKRGRKSS+ I+
Sbjct: 635 NPRRKRGRKSSTQTFIV 651


>tr|Q9FK88|Q9FK88_ARATH At5g22510 OS=Arabidopsis thaliana
GN=At5g22510 PE=2 SV=1
Length = 617

Score = 91.7 bits (226), Expect = 2e-17
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVVN---FCSLEA 312
EYYDT+ RFIGKQ+RLYQTWS+AGYLV+K+LL NPA A + EE + + C L A
Sbjct: 541 EYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMLSA 600

Query: 311 NPRRKRGRKSSSAPIII 261
NPRR RG K + P I+
Sbjct: 601 NPRRTRGPKKAQQPFIV 617


>tr|Q8H975|Q8H975_TOBAC Invertase (Fragment) OS=Nicotiana tabacum
GN=NtINV2 PE=2 SV=1
Length = 117

Score = 89.0 bits (219), Expect = 1e-16
Identities = 42/70 (60%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVIC-EESNVVN--FCSLEA 312
EYYDT+ RF+GKQ+RL+QTWS+AGYLV+K+LL NP+ A I+I E+S ++N C++ +
Sbjct: 47 EYYDTKKARFVGKQARLFQTWSIAGYLVAKLLLANPSAAKILITQEDSELLNAFSCAISS 106

Query: 311 NPRRKRGRKS 282
NPRRKRG KS
Sbjct: 107 NPRRKRGPKS 116


>tr|A7PQG4|A7PQG4_VITVI Chromosome chr6 scaffold_25, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022057001
PE=4 SV=1
Length = 639

Score = 87.8 bits (216), Expect = 2e-16
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVI-CEESNVVNFCS--LEA 312
EYYDT+ GRFIGKQ+RL+QTWS+AGYLVSK+LL NP ANI++ E+S++V+ S L A
Sbjct: 563 EYYDTKQGRFIGKQARLFQTWSIAGYLVSKLLLANPDAANILVNREDSDLVSAFSSMLSA 622

Query: 311 NPRRKRGRKSSSAPIII 261
NPRRKR K I+
Sbjct: 623 NPRRKRDWKGLKQKFIV 639


>tr|Q56UM2|Q56UM2_ORYSI Neutral/alkaline invertase 1 (Fragment)
OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 149

Score = 85.1 bits (209), Expect = 2e-15
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312
EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+
Sbjct: 73 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 132

Query: 311 NPRRKRGRKSSSAPIII 261
+ R K R+++ + +++
Sbjct: 133 SARTKCSRRAARSQVLV 149


>tr|Q10MC0|Q10MC0_ORYSJ Os03g0314800 protein OS=Oryza sativa subsp.
japonica GN=Os03g0314800 PE=4 SV=1
Length = 628

Score = 85.1 bits (209), Expect = 2e-15
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312
EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+
Sbjct: 552 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 611

Query: 311 NPRRKRGRKSSSAPIII 261
+ R K R+++ + +++
Sbjct: 612 SARTKCSRRAARSQVLV 628


>tr|A9RKW9|A9RKW9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_203483 PE=4 SV=1
Length = 606

Score = 84.0 bits (206), Expect = 3e-15
Identities = 42/68 (61%), Positives = 50/68 (73%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVVNFCSLEANPR 303
EYYDT+ GRFIGKQ+RLYQTWS+AGYL SK+L +NP AN + CEE + LEANP
Sbjct: 534 EYYDTKKGRFIGKQARLYQTWSIAGYLTSKLLSKNPDAANWLTCEEDDHYAIL-LEANPN 592

Query: 302 RKRGRKSS 279
KR K+S
Sbjct: 593 LKRKFKAS 600


>tr|A3AHC3|A3AHC3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_010195 PE=4 SV=1
Length = 704

Score = 82.8 bits (203), Expect = 8e-15
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312
EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+
Sbjct: 503 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 562

Query: 311 NPRRKRGRKSSSAPI 267
+ R K R+++ + +
Sbjct: 563 SARTKCSRRAARSQL 577


>tr|B8AMY9|B8AMY9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_11303 PE=4 SV=1
Length = 298

Score = 82.4 bits (202), Expect = 1e-14
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312
EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+
Sbjct: 167 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 226

Query: 311 NPRRKRGRKSS 279
+ R K R+++
Sbjct: 227 SARTKCSRRAA 237


>tr|B8AMY8|B8AMY8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_11302 PE=4 SV=1
Length = 683

Score = 82.4 bits (202), Expect = 1e-14
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = -3

Query: 482 EYYDTRTGRFIGKQSRLYQTWSVAGYLVSKMLLENPAGANIVICEESNVV---NFCSLEA 312
EYYDTRTGRFIGKQSRLYQTW++AGYL SKMLL+ P A+I+ICEE + CS+
Sbjct: 552 EYYDTRTGRFIGKQSRLYQTWTIAGYLSSKMLLDCPELASILICEEDLELLEGCACSVNK 611

Query: 311 NPRRKRGRKSS 279
+ R K R+++
Sbjct: 612 SARTKCSRRAA 622