BP918487 |
Clone id |
YMU001_000114_A12 |
Library |
YMU01 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_A12. |
Accession |
BP918487 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTAAAAGACATTGATTGGCCCTCTTCCTGTGTATGTACCAGATTAATAATGCTTACAGA AATTTGGCCCACTGCATTAATGAAAGCCATGTATCCTTACCAGCTGTAGCTATTGCCATG CAGAAGCTGCCACCAACGATTTATTTTTCCACCCAAGTAGTAGGACCAGCCCATCTTCCT TTAGCTTGTAACACTCATTGTAAGACTCTAGCAAAGACTTGATAGTGTTATTCACATACA AGCTCAAAGGGCGAGCCTTGAAACCCGCCATCAGCATGCGTGATCTCCATTTACCTGCAA CCTCATAGCGTTCAACCCTTTGCGCCCCTTCACAAGCAATAACATTGACGATTTCACGCG CAAGGCAGTGTTCCTCCACATTGACCCTGTCTTGGCTCTCTCTGTGGAGGGCTACATCAA TGGAGTCGAAAACGGCAGAATAGTAGTCCAAGGTCTCAATAAACCTTGCCAAGAATGGCG CTGTGTTCGTGTTTGCCTCCTGCTCTACCAAAGTAAGCACCTTCGGATTTAAACTTTTCG CCAGTCTCAGAAGACGATCTCGTGGGTTGTCGAGGCACACACTCTCATCTGGCATGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H125 |
Definition |
sp|Q8H125|SCL5_ARATH Scarecrow-like protein 5 OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
221.0 |
E-value |
2.0e-57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TWF6 |
Definition |
tr|A9TWF6|A9TWF6_PHYPA PAL1A AtPAT1-like protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
238.0 |
E-value |
3.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918487|Adiantum capillus-veneris mRNA, clone: YMU001_000114_A12. (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TWF6|A9TWF6_PHYPA PAL1A AtPAT1-like protein OS=Physcomitrel... 238 3e-61 tr|A9U324|A9U324_PHYPA PAL1B encoding AtPAT1-like protein OS=Phy... 236 6e-61 tr|A7P114|A7P114_VITVI Chromosome chr19 scaffold_4, whole genome... 227 5e-58 tr|A7P0E9|A7P0E9_VITVI Chromosome chr19 scaffold_4, whole genome... 225 1e-57 tr|A5ATM5|A5ATM5_VITVI Putative uncharacterized protein OS=Vitis... 225 1e-57 tr|B6SVG7|B6SVG7_MAIZE Chitin-inducible gibberellin-responsive p... 223 9e-57 tr|Q10QK3|Q10QK3_ORYSJ Os03g0193000 protein OS=Oryza sativa subs... 218 3e-55 tr|B8AQ19|B8AQ19_ORYSI Putative uncharacterized protein OS=Oryza... 218 3e-55 tr|B4FXY2|B4FXY2_MAIZE Putative uncharacterized protein OS=Zea m... 218 3e-55 tr|A3AF14|A3AF14_ORYSJ Putative uncharacterized protein OS=Oryza... 218 3e-55 tr|Q00LP6|Q00LP6_SOLLC GRAS2 OS=Solanum lycopersicum GN=GRAS2 PE... 217 4e-55 tr|A7QB46|A7QB46_VITVI Chromosome chr4 scaffold_73, whole genome... 217 5e-55 tr|A5ASP1|A5ASP1_VITVI Putative uncharacterized protein OS=Vitis... 217 5e-55 tr|Q8S5N0|Q8S5N0_ORYSJ Putative SCARECROW gene regulator-like (P... 216 1e-54 tr|Q339D4|Q339D4_ORYSJ Chitin-inducible gibberellin-responsive p... 216 1e-54 tr|Q1WBS8|Q1WBS8_9POAL Putative chitin-inducible gibberellin-res... 216 1e-54 tr|Q0IY48|Q0IY48_ORYSJ Os10g0369600 protein (Fragment) OS=Oryza ... 216 1e-54 tr|A2Z6I1|A2Z6I1_ORYSI Putative uncharacterized protein OS=Oryza... 216 1e-54 tr|Q0D544|Q0D544_ORYSJ Os07g0583600 protein OS=Oryza sativa subs... 215 2e-54 tr|A2YN28|A2YN28_ORYSI Putative uncharacterized protein OS=Oryza... 215 2e-54 tr|Q00LP2|Q00LP2_SOLLC GRAS7 (Fragment) OS=Solanum lycopersicum ... 214 3e-54 tr|A7Q341|A7Q341_VITVI Chromosome chr12 scaffold_47, whole genom... 211 2e-53 tr|Q00LP3|Q00LP3_SOLLC GRAS6 OS=Solanum lycopersicum GN=GRAS6 PE... 210 6e-53 tr|A5HJS4|A5HJS4_9POAL Scarecrow OS=Aeluropus littoralis PE=4 SV=1 209 8e-53 tr|A7NSM0|A7NSM0_VITVI Chromosome chr18 scaffold_1, whole genome... 209 1e-52 tr|A5AZP2|A5AZP2_VITVI Putative uncharacterized protein OS=Vitis... 209 1e-52 tr|Q0D5P2|Q0D5P2_ORYSJ Os07g0545800 protein OS=Oryza sativa subs... 207 4e-52 tr|A3BKV5|A3BKV5_ORYSJ Putative uncharacterized protein OS=Oryza... 207 4e-52 tr|A2YMC9|A2YMC9_ORYSI Putative uncharacterized protein OS=Oryza... 207 4e-52 tr|A7R429|A7R429_VITVI Chromosome undetermined scaffold_610, who... 206 1e-51
>tr|A9TWF6|A9TWF6_PHYPA PAL1A AtPAT1-like protein OS=Physcomitrella patens subsp. patens GN=PAL1A PE=4 SV=1 Length = 355
Score = 238 bits (606), Expect = 3e-61 Identities = 107/162 (66%), Positives = 139/162 (85%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 HMPDESVC NPRDR+L + K+LNPKV+TLVEQE+NTNTAPF RF+E ++YY+A+F+S+ Sbjct: 194 HMPDESVCTSNPRDRILHMVKALNPKVVTLVEQESNTNTAPFFPRFLEAMNYYAAIFESL 253
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 D+ L RES++RVNVE+ CLAR+IVN+IACEG RVER+E+ GKWR+R+ MAGF+ PLS Sbjct: 254 DITLARESKERVNVEQQCLARDIVNIIACEGIDRVERHEMMGKWRARLTMAGFRPYPLSQ 313
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAWQ 113 VNNTIK+LLESY++ Y+LK++G L LGWKN+SL+ +SAWQ Sbjct: 314 TVNNTIKTLLESYSDKYRLKDEGGALYLGWKNRSLIVSSAWQ 355
>tr|A9U324|A9U324_PHYPA PAL1B encoding AtPAT1-like protein OS=Physcomitrella patens subsp. patens GN=PAL1B PE=4 SV=1 Length = 355
Score = 236 bits (603), Expect = 6e-61 Identities = 108/161 (67%), Positives = 135/161 (83%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 HMPDESVC NPRDR+L + K LNPKV+TLVEQE+NTNTAPF RF+E L YYSA+F+S+ Sbjct: 194 HMPDESVCTSNPRDRMLHMIKGLNPKVMTLVEQESNTNTAPFFPRFLEALSYYSAIFESL 253
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 D+ L RES++RVNVE+ CLAR+IVN+IACEG RVER+E+ GKWR+R+ MAGF+ PLS Sbjct: 254 DITLARESKERVNVEQQCLARDIVNIIACEGIDRVERHEMMGKWRARLTMAGFRPYPLSQ 313
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 VNNTIK+LLESY++ Y+LKE+G L LGWKN+ L+ +SAW Sbjct: 314 TVNNTIKTLLESYSDKYRLKEEGGALFLGWKNRPLIVSSAW 354
>tr|A7P114|A7P114_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027444001 PE=4 SV=1 Length = 534
Score = 227 bits (578), Expect = 5e-58 Identities = 107/161 (66%), Positives = 135/161 (83%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H PDESV ++NPRD LLR+ KSL+PKV TLVEQE+NTNT PF RFIETLDYYSA+F+SI Sbjct: 373 HTPDESVDVNNPRDELLRMVKSLSPKVTTLVEQESNTNTTPFFTRFIETLDYYSAMFESI 432
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DVAL RE ++R+NVE+HCLAR+IVN+IACEG +RVER+E+ GKW+SR+ MAGF+ PLS Sbjct: 433 DVALPRERKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQYPLST 492
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 YVN+ I++LL Y+E Y L E +LLGWK+++LV+ASAW Sbjct: 493 YVNSVIRTLLRCYSEHYTLVERDGAMLLGWKDRNLVSASAW 533
>tr|A7P0E9|A7P0E9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027205001 PE=4 SV=1 Length = 526
Score = 225 bits (574), Expect = 1e-57 Identities = 108/161 (67%), Positives = 134/161 (83%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 HMPDESV N RDRLLRL KSL+PKV+TLVEQE+NTNTAPFL+RFIE ++YY AVF+SI Sbjct: 365 HMPDESVDTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLSRFIEAMNYYLAVFESI 424
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DV L R+ ++R+N E+HCLAREIVN+IACEGA+RVER+E+ GKW+SR LMAGF PLS Sbjct: 425 DVTLPRDHKERINAEQHCLAREIVNIIACEGAERVERHELLGKWKSRFLMAGFTPHPLSS 484
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 YVN TIK+LL++Y++ Y L+E L LGW +++LVAA AW Sbjct: 485 YVNATIKTLLQNYSDKYSLEEKDGALYLGWMDRALVAACAW 525
>tr|A5ATM5|A5ATM5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004660 PE=4 SV=1 Length = 444
Score = 225 bits (574), Expect = 1e-57 Identities = 108/161 (67%), Positives = 134/161 (83%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 HMPDESV N RDRLLRL KSL+PKV+TLVEQE+NTNTAPFL+RFIE ++YY AVF+SI Sbjct: 283 HMPDESVDTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLSRFIEAMNYYLAVFESI 342
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DV L R+ ++R+N E+HCLAREIVN+IACEGA+RVER+E+ GKW+SR LMAGF PLS Sbjct: 343 DVTLPRDHKERINAEQHCLAREIVNIIACEGAERVERHELLGKWKSRFLMAGFTPHPLSS 402
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 YVN TIK+LL++Y++ Y L+E L LGW +++LVAA AW Sbjct: 403 YVNATIKTLLQNYSDKYSLEEKDGALYLGWMDRALVAACAW 443
>tr|B6SVG7|B6SVG7_MAIZE Chitin-inducible gibberellin-responsive protein 2 OS=Zea mays PE=2 SV=1 Length = 554
Score = 223 bits (567), Expect = 9e-57 Identities = 104/161 (64%), Positives = 133/161 (82%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H+PDE+V N RDR+LRL K L+PKVLTLVEQE+NTNTAPF RF ETLDYY+A+F+SI Sbjct: 393 HIPDETVSTANHRDRILRLVKGLSPKVLTLVEQESNTNTAPFAQRFAETLDYYTAIFESI 452
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 D+AL R+ ++R+N+E+HCLAREIVN++ACEG +RVER+EV GKW++R++MAGF PLS Sbjct: 453 DLALPRDDRERINIEQHCLAREIVNLVACEGEERVERHEVFGKWKARLMMAGFSPSPLSA 512
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 VN TIK+LL+SY+ YKL E VL LGWKN+ L+ +SAW Sbjct: 513 LVNATIKTLLQSYSPDYKLAERDGVLYLGWKNRPLIVSSAW 553
>tr|Q10QK3|Q10QK3_ORYSJ Os03g0193000 protein OS=Oryza sativa subsp. japonica GN=Os03g0193000 PE=2 SV=1 Length = 535
Score = 218 bits (554), Expect = 3e-55 Identities = 101/162 (62%), Positives = 133/162 (82%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H PDESV ++N RDR+LR+ K L+P+V+TLVEQEANTNTAPF R++ETLDYY+A+F++I Sbjct: 374 HTPDESVGIENHRDRILRMVKGLSPRVVTLVEQEANTNTAPFFNRYLETLDYYTAMFEAI 433
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DVA R+ + R++ E+HC+AR+IVN+IACEGA+RVER+E GKWR+R+ MAGF+ PLS Sbjct: 434 DVACPRDDKKRISTEQHCVARDIVNLIACEGAERVERHEPFGKWRARLSMAGFRPYPLSA 493
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAWQ 113 VNNTIK LL+SY+ YKL+E L LGWKN+ LV +SAW+ Sbjct: 494 LVNNTIKKLLDSYHSYYKLEERDGALYLGWKNRKLVVSSAWR 535
>tr|B8AQ19|B8AQ19_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10352 PE=4 SV=1 Length = 535
Score = 218 bits (554), Expect = 3e-55 Identities = 101/162 (62%), Positives = 133/162 (82%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H PDESV ++N RDR+LR+ K L+P+V+TLVEQEANTNTAPF R++ETLDYY+A+F++I Sbjct: 374 HTPDESVGIENHRDRILRMVKGLSPRVVTLVEQEANTNTAPFFNRYLETLDYYTAMFEAI 433
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DVA R+ + R++ E+HC+AR+IVN+IACEGA+RVER+E GKWR+R+ MAGF+ PLS Sbjct: 434 DVACPRDDKKRISTEQHCVARDIVNLIACEGAERVERHEPFGKWRARLSMAGFRPYPLSA 493
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAWQ 113 VNNTIK LL+SY+ YKL+E L LGWKN+ LV +SAW+ Sbjct: 494 LVNNTIKKLLDSYHSYYKLEERDGALYLGWKNRKLVVSSAWR 535
>tr|B4FXY2|B4FXY2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 570
Score = 218 bits (554), Expect = 3e-55 Identities = 101/161 (62%), Positives = 131/161 (81%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H PDESV ++NPRD LLR+ K L+PKV TLVEQE++TNT PFL RF ETLDYYSA+F+SI Sbjct: 409 HTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFTETLDYYSAMFESI 468
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 D L R++++R+NVE+HCLA++IVN+IACEG RVER+E+ GKWRSR+ MAGF+ PLS Sbjct: 469 DTNLPRDNKERINVEQHCLAKDIVNIIACEGKDRVERHELLGKWRSRLTMAGFRPYPLSS 528
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAW 116 YVN+ I+ LL Y++ Y L+E +LLGWKN+ L++ASAW Sbjct: 529 YVNSVIRKLLACYSDKYTLEEKDGAMLLGWKNRKLISASAW 569
>tr|A3AF14|A3AF14_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009386 PE=4 SV=1 Length = 620
Score = 218 bits (554), Expect = 3e-55 Identities = 101/162 (62%), Positives = 133/162 (82%) Frame = -1
Query: 598 HMPDESVCLDNPRDRLLRLAKSLNPKVLTLVEQEANTNTAPFLARFIETLDYYSAVFDSI 419 H PDESV ++N RDR+LR+ K L+P+V+TLVEQEANTNTAPF R++ETLDYY+A+F++I Sbjct: 459 HTPDESVGIENHRDRILRMVKGLSPRVVTLVEQEANTNTAPFFNRYLETLDYYTAMFEAI 518
Query: 418 DVALHRESQDRVNVEEHCLAREIVNVIACEGAQRVERYEVAGKWRSRMLMAGFKARPLSL 239 DVA R+ + R++ E+HC+AR+IVN+IACEGA+RVER+E GKWR+R+ MAGF+ PLS Sbjct: 519 DVACPRDDKKRISTEQHCVARDIVNLIACEGAERVERHEPFGKWRARLSMAGFRPYPLSA 578
Query: 238 YVNNTIKSLLESYNECYKLKEDGLVLLLGWKNKSLVAASAWQ 113 VNNTIK LL+SY+ YKL+E L LGWKN+ LV +SAW+ Sbjct: 579 LVNNTIKKLLDSYHSYYKLEERDGALYLGWKNRKLVVSSAWR 620
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