| BP918490 |
| Clone id |
YMU001_000114_B03 |
| Library |
YMU01 |
| Length |
569 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_B03. |
| Accession |
BP918490 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TCCAATTTGGAGAGCGCAGCGTGCGTCTCCACGAAAGCCCCCAAAAGCGTCTTCTCATAG
TTATAAAGCGCGTTCAGTTGCTGCGCATCCGCCTGAGCAAACTGCGCACGAATCGCTCGC
TTGTTGATCAGCGGAGCCGTCAGAGTGCCCAGCGCGTTCCACAGCACCGACTCCGGCAGG
CGCACCAAATACTTCGGGTTGAAAGCGTTCACCCCCAAAGCAGCCGACACATTCAGTTGC
GGCAAAAACTCCTTACGCGCCGTTTCCACATCCCATTTCGCAGCCGCCAATTCGTGTTCC
GCCTGCACCACGTCAGCCCTCGCCAACAAGCGCTCCACCGCCAAAGCCCCCTCCGCAGAA
GGCAAAGACAATGCCGCCAAATCTTTCGGCTTGCGCACAATGGCTTGCGGCAAACGCCCC
AAGAGCAAGTTCAGCGTGTGCTCTCGATCAGCAATCTCCTCGCGCAGCCCACACTCATCC
GCTTCCCCCTTCGCCACCTCAGCAGCAAATTTCTCCACCGCTAGTTGCGTACCAGCGTCC
GCCTCCTTTTGAATCTTCGCCAGTTGCAC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P77211 |
| Definition |
sp|P77211|CUSC_ECOLI Cation efflux system protein cusC OS=Escherichia coli (strain K12) |
| Align length |
189 |
| Score (bit) |
73.9 |
| E-value |
5.0e-13 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918490|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_B03.
(569 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P77211|CUSC_ECOLI Cation efflux system protein cusC OS=Escher... 74 5e-13
sp|Q8XBY3|CUSC_ECO57 Cation efflux system protein cusC OS=Escher... 74 5e-13
sp|Q8CWA4|CUSC_ECOL6 Cation efflux system protein cusC OS=Escher... 73 9e-13
sp|O31101|SRPC_PSEPU Solvent efflux pump outer membrane protein ... 69 1e-11
sp|Q93PU3|TTGI_PSEPU Toluene efflux pump outer membrane protein ... 66 1e-10
sp|Q9ZHD2|SILC_SALTY Probable outer membrane lipoprotein silC OS... 63 9e-10
sp|Q51397|OPRJ_PSEAE Outer membrane protein oprJ OS=Pseudomonas ... 61 3e-09
sp|Q9WWZ8|TTGC_PSEPU Toluene efflux pump outer membrane protein ... 55 2e-07
sp|Q88N32|TTGC_PSEPK Probable efflux pump outer membrane protein... 55 2e-07
sp|P0C071|MEPC_PSEPU Multidrug/solvent efflux pump outer membran... 55 2e-07
sp|Q9KJC1|ARPC_PSEPU Antibiotic efflux pump outer membrane prote... 55 2e-07
sp|Q9KWV3|TTGF_PSEPU Toluene efflux pump outer membrane protein ... 52 2e-06
sp|Q849R1|SEPC_PSEP1 Probable efflux pump outer membrane protein... 52 2e-06
sp|Q51487|OPRM_PSEAE Outer membrane protein oprM OS=Pseudomonas ... 49 1e-05
sp|P24126|FUSA_BURCE Fusaric acid resistance protein fusA OS=Bur... 46 1e-04
sp|Q29S21|K2C7_BOVIN Keratin, type II cytoskeletal 7 OS=Bos taur... 42 0.003
sp|O93532|K2CO_CHICK Keratin, type II cytoskeletal cochleal OS=G... 41 0.005
sp|P49455|TPM4_DROME Tropomyosin-1, isoforms 33/34 OS=Drosophila... 38 0.040
sp|P15727|NODT_RHILV Nodulation protein T OS=Rhizobium leguminos... 37 0.090
sp|Q83KF5|MDTQ_SHIFL Putative multidrug resistance outer membran... 37 0.090
sp|P07197|NFM_HUMAN Neurofilament medium polypeptide OS=Homo sap... 36 0.12
sp|O77788|NFM_BOVIN Neurofilament medium polypeptide OS=Bos taur... 36 0.15
sp|P33369|MDTQ_ECOLI Putative multidrug resistance outer membran... 36 0.15
sp|Q8FFV6|MDTQ_ECOL6 Multidrug resistance outer membrane protein... 36 0.15
sp|P16053|NFM_CHICK Neurofilament medium polypeptide OS=Gallus g... 35 0.20
sp|Q8X659|MDTQ_ECO57 Multidrug resistance outer membrane protein... 35 0.20
sp|Q8HZR5|K2C7_POTTR Keratin, type II cytoskeletal 7 OS=Potorous... 35 0.26
sp|P12839|NFM_RAT Neurofilament medium polypeptide OS=Rattus nor... 34 0.45
sp|P54938|NFM_RABIT Neurofilament medium polypeptide (Fragment) ... 34 0.45
sp|P08553|NFM_MOUSE Neurofilament medium polypeptide OS=Mus musc... 34 0.45
>sp|P77211|CUSC_ECOLI Cation efflux system protein cusC
OS=Escherichia coli (strain K12) GN=cusC PE=1 SV=1
Length = 457
Score = 73.9 bits (180), Expect = 5e-13
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Frame = -1
Query: 560 AKIQKEADAGTQ--LAVEKFAAEVAKGEADECGLREEIADREHTLNLLLG---RLPQAIV 396
A ++K+ G+ LA+E+ + +D + E+A + L LLLG +LPQA
Sbjct: 198 AFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQT 257
Query: 395 RKPKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAAL 216
L ++ LP+ L+ + LL R D+++AEH L AA ++ AR F P +++++ +
Sbjct: 258 VNSDSLQSVKLPAG---LSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGI 314
Query: 215 GVNAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGA 36
+ + L S +WN + + P+ N +A A+ +Q ++ NYE+ + A
Sbjct: 315 STASSDLSSLFN-ASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNA 373
Query: 35 FVETHAALS 9
F E AL+
Sbjct: 374 FKEVADALA 382
>sp|Q8XBY3|CUSC_ECO57 Cation efflux system protein cusC
OS=Escherichia coli O157:H7 GN=cusC PE=2 SV=1
Length = 460
Score = 73.9 bits (180), Expect = 5e-13
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Frame = -1
Query: 560 AKIQKEADAGTQ--LAVEKFAAEVAKGEADECGLREEIADREHTLNLLLG---RLPQAIV 396
A ++K+ G+ LA+E+ + +D + E+A + L LLLG +LPQA
Sbjct: 198 AFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQT 257
Query: 395 RKPKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAAL 216
L ++ LP+ L+ + LL R D+++AEH L AA ++ AR F P +++++ +
Sbjct: 258 VNSDSLQSVKLPAG---LSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGI 314
Query: 215 GVNAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGA 36
+ + L S +WN + + P+ N +A A+ +Q ++ NYE+ + A
Sbjct: 315 STASSDLSSLFN-ASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNA 373
Query: 35 FVETHAALS 9
F E AL+
Sbjct: 374 FKEVADALA 382
>sp|Q8CWA4|CUSC_ECOL6 Cation efflux system protein cusC
OS=Escherichia coli O6 GN=cusC PE=2 SV=1
Length = 460
Score = 73.2 bits (178), Expect = 9e-13
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Frame = -1
Query: 560 AKIQKEADAGTQ--LAVEKFAAEVAKGEADECGLREEIADREHTLNLLLG---RLPQAIV 396
A ++K+ G+ LA+E+ + +D + E+A + L LLLG +LPQA
Sbjct: 198 AFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQT 257
Query: 395 RKPKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAAL 216
L ++ LP+ L + LL R D+++AEH L AA ++ AR F P +++++ +
Sbjct: 258 VNSDSLQSVKLPAG---LPSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGI 314
Query: 215 GVNAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGA 36
+ + L S +WN + + P+ N +A A+ +Q ++ NYE+ + A
Sbjct: 315 STASSDLSSLFN-ASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNA 373
Query: 35 FVETHAALS 9
F E AL+
Sbjct: 374 FKEVADALA 382
>sp|O31101|SRPC_PSEPU Solvent efflux pump outer membrane protein
srpC OS=Pseudomonas putida GN=srpC PE=2 SV=1
Length = 470
Score = 69.3 bits (168), Expect = 1e-11
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Frame = -1
Query: 563 LAKIQKEADAGT--QLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
LA I+ A AGT +L V + V + +A + IA + L LLLG + K
Sbjct: 204 LAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDVNALELLLGSKIPTDLPK 263
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
LA +L L + LL R D+ AEH+L AA ++ AR F P+++++A+ G
Sbjct: 264 NSPLAMSALGKVPAGLPADLLLNRPDIRSAEHQLMAANANIGAARAAFFPRISLTASAGS 323
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
+ + L S W+ ++ P+ N +RA A+ Q+ + YEK++ AF
Sbjct: 324 ASSDLDGLFN-SGSDSWSFAPQISVPIFNAGKLRANLDYAELQKDVGVATYEKSIQTAFR 382
Query: 29 ETHAALS 9
E L+
Sbjct: 383 EVADGLA 389
>sp|Q93PU3|TTGI_PSEPU Toluene efflux pump outer membrane protein
ttgI OS=Pseudomonas putida GN=ttgI PE=2 SV=1
Length = 470
Score = 65.9 bits (159), Expect = 1e-10
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Frame = -1
Query: 563 LAKIQKEADAGT--QLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
LA I+ A AGT +L V + V + +A + IA + L LLLG + K
Sbjct: 204 LAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDVNALELLLGSKIPTDLPK 263
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
LA +L L + LL R + AEH+L AA ++ AR F P+++++A+ G
Sbjct: 264 NSPLAMSALGKVPAGLPADLLLNRPRIRSAEHQLMAANANIGAARAAFFPRISLTASAGS 323
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
+ + L S W+ ++ P+ N +RA A+ Q+ + YEK++ AF
Sbjct: 324 ASSDLDGLFN-SGSDSWSFAPQISVPIFNAGKLRANLDYAELQKDVGVATYEKSIETAFR 382
Query: 29 ETHAALS 9
E L+
Sbjct: 383 EVADGLA 389
>sp|Q9ZHD2|SILC_SALTY Probable outer membrane lipoprotein silC
OS=Salmonella typhimurium GN=silC PE=3 SV=1
Length = 461
Score = 63.2 bits (152), Expect = 9e-10
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Frame = -1
Query: 518 VEKFAAEVAKGEADECGLREEIADREHTLNLLLGR---LPQAIVRKPKDLAALSLPSAEG 348
+E AE+AK E D +A + L L+LG +P K ++A + LP
Sbjct: 222 IESTRAEIAKREGD-------LAQANNALQLVLGTYRAVPSEKGIKGGEIAPVKLPPN-- 272
Query: 347 ALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVNAFNPKYLVRLPES 168
L+ + LL R D+++AE++L AA ++ AR F P + +++ L ++ L S
Sbjct: 273 -LSSQILLQRPDIMEAEYQLKAADANIGAARAAFFPSITLTSGLSSSSTELSSLFT-SGS 330
Query: 167 VLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVETHAALS 9
+WN + + P+ N +A A+ +Q ++ NYE+ + AF + L+
Sbjct: 331 GMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQSVVNYEQKIQSAFKDVSDTLA 383
>sp|Q51397|OPRJ_PSEAE Outer membrane protein oprJ OS=Pseudomonas
aeruginosa GN=oprJ PE=3 SV=2
Length = 479
Score = 61.2 bits (147), Expect = 3e-09
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Frame = -1
Query: 551 QKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGR--LPQAIVRKPKDL 378
++ A A T L ++ V + A++ + + L LLLG QAI R P
Sbjct: 209 RRAAGAATALDYQEALGLVEQARAEQERNLRQKQQAFNALVLLLGSDDAAQAIPRSPGQR 268
Query: 377 AALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVNAFN 198
L A G + E + R D++ AEH L A D+ AR F P+++++ + G ++
Sbjct: 269 PKLLQDIAPGTPS-ELIERRPDILAAEHRLRARNADIGAARAAFFPRISLTGSFGTSSAE 327
Query: 197 PKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVETHA 18
L S W+ L TLT P+ + RA + A+A++ +A+ YE T+ AF E
Sbjct: 328 MSGLFD-GGSRSWSFLPTLTLPIFDGGRNRANLSLAEARKDSAVAAYEGTIQTAFREVAD 386
Query: 17 ALS 9
AL+
Sbjct: 387 ALA 389
>sp|Q9WWZ8|TTGC_PSEPU Toluene efflux pump outer membrane protein
ttgC OS=Pseudomonas putida GN=ttgC PE=2 SV=1
Length = 484
Score = 55.1 bits (131), Expect = 2e-07
Identities = 46/185 (24%), Positives = 79/185 (42%)
Frame = -1
Query: 563 LAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRKPK 384
L + E + L V + V + +A ++L +LLG A + KP
Sbjct: 207 LTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPADLAKPL 266
Query: 383 DLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVNA 204
+L A L L + L R D+ +AEH L AA ++ AR F P ++++A G +
Sbjct: 267 ELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLS 326
Query: 203 FNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVET 24
+ +L + W + P+ N +++A + Q+ + YEKT+ AF E
Sbjct: 327 PDMGHLFAGGQGT-WLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEV 385
Query: 23 HAALS 9
L+
Sbjct: 386 SDGLA 390
>sp|Q88N32|TTGC_PSEPK Probable efflux pump outer membrane protein
ttgC OS=Pseudomonas putida (strain KT2440) GN=ttgC PE=1
SV=1
Length = 484
Score = 55.1 bits (131), Expect = 2e-07
Identities = 46/185 (24%), Positives = 79/185 (42%)
Frame = -1
Query: 563 LAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRKPK 384
L + E + L V + V + +A ++L +LLG A + KP
Sbjct: 207 LTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPADLAKPL 266
Query: 383 DLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVNA 204
+L A L L + L R D+ +AEH L AA ++ AR F P ++++A G +
Sbjct: 267 ELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLS 326
Query: 203 FNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVET 24
+ +L + W + P+ N +++A + Q+ + YEKT+ AF E
Sbjct: 327 PDMGHLFSGGQGT-WLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEV 385
Query: 23 HAALS 9
L+
Sbjct: 386 SDGLA 390
>sp|P0C071|MEPC_PSEPU Multidrug/solvent efflux pump outer membrane
protein mepC OS=Pseudomonas putida GN=mepC PE=1 SV=1
Length = 484
Score = 55.1 bits (131), Expect = 2e-07
Identities = 46/185 (24%), Positives = 79/185 (42%)
Frame = -1
Query: 563 LAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRKPK 384
L + E + L V + V + +A ++L +LLG A + KP
Sbjct: 207 LTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPADLAKPL 266
Query: 383 DLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVNA 204
+L A L L + L R D+ +AEH L AA ++ AR F P ++++A G +
Sbjct: 267 ELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLS 326
Query: 203 FNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVET 24
+ +L + W + P+ N +++A + Q+ + YEKT+ AF E
Sbjct: 327 PDMGHLFSGGQGT-WLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEV 385
Query: 23 HAALS 9
L+
Sbjct: 386 SDGLA 390
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A5FAA9 |
| Definition |
tr|A5FAA9|A5FAA9_FLAJ1 RND efflux system, outer membrane lipoprotein, NodT family OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) |
| Align length |
190 |
| Score (bit) |
167.0 |
| E-value |
5.0e-40 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918490|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_B03.
(569 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A5FAA9|A5FAA9_FLAJ1 RND efflux system, outer membrane lipopro... 167 5e-40
tr|A6EBB9|A6EBB9_9SPHI Outer membrane protein OS=Pedobacter sp. ... 164 4e-39
tr|A6GY54|A6GY54_FLAPJ Probable outer membrane efflux protein OS... 162 1e-38
tr|Q1Q0Z4|Q1Q0Z4_9BACT Similar to outer-membrane efflux protein ... 159 1e-37
tr|A6C6R0|A6C6R0_9PLAN Probable outer membrane lipoprotein IbeB ... 157 4e-37
tr|A5FBL1|A5FBL1_FLAJ1 RND efflux system, outer membrane lipopro... 155 2e-36
tr|A3XM56|A3XM56_9FLAO Outer membrane efflux family protein OS=L... 153 7e-36
tr|Q7UVX4|Q7UVX4_RHOBA Probable outer membrane lipoprotein IbeB ... 149 1e-34
tr|A3ZP01|A3ZP01_9PLAN Probable outer membrane lipoprotein IbeB ... 147 5e-34
tr|A3HWZ5|A3HWZ5_9SPHI RND efflux system, outer membrane lipopro... 147 5e-34
tr|A4BY57|A4BY57_9FLAO RND efflux system, outer membrane lipopro... 144 4e-33
tr|Q11R55|Q11R55_CYTH3 Outer membrane protein OS=Cytophaga hutch... 136 9e-31
tr|B0SRG2|B0SRG2_LEPBP Putative ABC-type transport sytem, outer ... 129 1e-28
tr|B0SHU2|B0SHU2_LEPBA TolC related protein OS=Leptospira biflex... 129 1e-28
tr|Q1H4E4|Q1H4E4_METFK RND efflux system, outer membrane lipopro... 127 3e-28
tr|Q11XP0|Q11XP0_CYTH3 Outer membrane lipoprotein OS=Cytophaga h... 127 3e-28
tr|Q605P7|Q605P7_METCA Outer membrane efflux family protein OS=M... 125 1e-27
tr|Q2Y897|Q2Y897_NITMU RND efflux system, outer membrane lipopro... 120 5e-26
tr|A4WA95|A4WA95_ENT38 RND efflux system, outer membrane lipopro... 91 3e-17
tr|B5XRI3|B5XRI3_KLEP3 Efflux transporter, outer membrane factor... 89 1e-16
tr|B6FBY9|B6FBY9_9ENTR Putative uncharacterized protein OS=Enter... 89 1e-16
tr|A8AGG4|A8AGG4_CITK8 Putative uncharacterized protein OS=Citro... 88 4e-16
tr|B6VW99|B6VW99_9BACE Putative uncharacterized protein OS=Bacte... 87 5e-16
tr|B5CUL2|B5CUL2_9BACE Putative uncharacterized protein OS=Bacte... 87 5e-16
tr|A6L692|A6L692_BACV8 Outer membrane protein OS=Bacteroides vul... 87 8e-16
tr|A6T8J7|A6T8J7_KLEP7 Putative outer membrane efflux protein OS... 86 1e-15
tr|A6L8P7|A6L8P7_PARD8 Putative multidrug resistance protein OS=... 86 1e-15
tr|A5V3F3|A5V3F3_SPHWW RND efflux system, outer membrane lipopro... 86 1e-15
tr|A3HTI6|A3HTI6_9SPHI Probable outer membrane lipoprotein IbeB ... 86 2e-15
tr|B3E877|B3E877_GEOLS RND efflux system, outer membrane lipopro... 85 2e-15
>tr|A5FAA9|A5FAA9_FLAJ1 RND efflux system, outer membrane
lipoprotein, NodT family OS=Flavobacterium johnsoniae
(strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_4861 PE=3
SV=1
Length = 479
Score = 167 bits (422), Expect = 5e-40
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++ K+QK+A T+L V+KF AEV ++ E + ++I + E+ +N LLGR PQ I R+
Sbjct: 216 LEIVKVQKQAARATELGVQKFQAEVLTSKSLEFDILQKIKENENKINFLLGRYPQEIKRE 275
Query: 389 PKDLAALSLPSAEGALAVERLLA-RADVVQAEHELAAAKWDVETARKEFLPQLNVSAALG 213
+ L LP+ + +LLA R DV QAE EL AAK DV+ A+ EF P L++SAA G
Sbjct: 276 KTNFTDL-LPAVVNSGIPSQLLANRPDVKQAELELVAAKLDVKVAKAEFYPSLDISAAFG 334
Query: 212 VNAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAF 33
V AF P YL PES+L++ G L APLIN+ AI+A+F+ A+A+QL ALYNY+KT+L A+
Sbjct: 335 VQAFKPSYLFTFPESILYSLAGDLAAPLINRNAIKAEFSSANARQLQALYNYDKTILNAY 394
Query: 32 VETHAALSKL 3
+E LSK+
Sbjct: 395 LEVSTQLSKI 404
>tr|A6EBB9|A6EBB9_9SPHI Outer membrane protein OS=Pedobacter sp.
BAL39 GN=PBAL39_04448 PE=4 SV=1
Length = 477
Score = 164 bits (414), Expect = 4e-39
Identities = 83/189 (43%), Positives = 122/189 (64%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++ KIQKEA T+LAV+KF AEV ++ E ++++I + E+ +N LLGR PQAI R
Sbjct: 214 LEVVKIQKEASRVTELAVQKFRAEVLNSQSLEFNIQQQITETENKINALLGRYPQAIPRT 273
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
+ + + + L R D+ +AE EL AAK DV+ AR EF P +SA G
Sbjct: 274 QHHFFDIMPAMVQTGIPSQLLANRPDIKKAELELVAAKLDVKVARAEFYPSFGISAGFGF 333
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
AFNP YLV+ PES+L++ +G L PLIN+ I+A+F A+A+Q+ A+YNYEKT+L A++
Sbjct: 334 QAFNPSYLVKFPESMLYSLVGDLAGPLINRNGIKAEFLSANARQIQAMYNYEKTILNAYM 393
Query: 29 ETHAALSKL 3
E +LS +
Sbjct: 394 EVSNSLSSI 402
>tr|A6GY54|A6GY54_FLAPJ Probable outer membrane efflux protein
OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511) GN=FP0933 PE=4 SV=1
Length = 478
Score = 162 bits (410), Expect = 1e-38
Identities = 88/190 (46%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++ KIQK+A T+LAV+KF AEV ++ E + ++I E+ +N LL R PQ I R
Sbjct: 215 LEIIKIQKQAARATELAVQKFEAEVLSSKSKEFDILQDIKQTENRINFLLARYPQEIKRD 274
Query: 389 PKDLAALSLPSAEGALAVERLLA-RADVVQAEHELAAAKWDVETARKEFLPQLNVSAALG 213
+ L LPS + +LLA R D+ QAE +L AAK DV+ AR EF P L++S A+G
Sbjct: 275 NSNFLKL-LPSIIRSGIPSQLLANRPDIKQAELQLVAAKLDVKVARAEFYPSLDISGAIG 333
Query: 212 VNAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAF 33
+ AFNP YL +LPES+L++ G + PLIN+ AI+A+F A+A+QL A+YNYE+T+L A+
Sbjct: 334 LQAFNPSYLFQLPESLLYSLAGDIAGPLINRNAIKAEFKNANARQLQAMYNYERTILNAY 393
Query: 32 VETHAALSKL 3
+E LSK+
Sbjct: 394 LEISNQLSKI 403
>tr|Q1Q0Z4|Q1Q0Z4_9BACT Similar to outer-membrane efflux protein
OS=Candidatus Kuenenia stuttgartiensis GN=oprM PE=4 SV=1
Length = 479
Score = 159 bits (402), Expect = 1e-37
Identities = 82/189 (43%), Positives = 121/189 (64%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
++ K+QKEA T+LAV KF AEV K ++ + + ++I + E+ +N L+GR PQ + R
Sbjct: 213 LKTVKLQKEAAKATELAVRKFEAEVLKNQSYQYNIEQKITETENRINFLVGRFPQPVQRN 272
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
+ L + L + L R D+ QAE ELAAAK DV+ AR F P L++ A +G
Sbjct: 273 SQGYNDLVPDTIHAGLPSQLLTNRPDIKQAELELAAAKLDVKVARARFYPSLDIVAGVGY 332
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
AF+ KYL+R PES+L+N G L PLIN+ AI+A + A+A+Q+ A+YNYE+T+L A++
Sbjct: 333 QAFDLKYLIRTPESILYNLAGELAVPLINRNAIKATYNNANAKQIQAVYNYERTVLNAYI 392
Query: 29 ETHAALSKL 3
E LSK+
Sbjct: 393 EVVNKLSKI 401
>tr|A6C6R0|A6C6R0_9PLAN Probable outer membrane lipoprotein IbeB
OS=Planctomyces maris DSM 8797 GN=PM8797T_24716 PE=4
SV=1
Length = 483
Score = 157 bits (397), Expect = 4e-37
Identities = 77/189 (40%), Positives = 128/189 (67%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++AK KEA GT+LAV++F AEV K ++++ +++ + + E+ +N L GR PQ++ RK
Sbjct: 179 LEVAKANKEAARGTELAVQRFQAEVRKNQSEKLIIQQRLIETENRINFLAGRYPQSVERK 238
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
D L++ + + + L RAD+ QAE EL AA +++ AR F P L ++A +G
Sbjct: 239 QVDFFELNMHTINIGVPSQMLNNRADIRQAERELQAAGLEIQVARARFYPSLVLNAGVGY 298
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
+AFNP+YL PES+++NA+G L AP+IN+RAI+A + A+A+Q+ A+Y Y++T+L AF
Sbjct: 299 SAFNPRYLFITPESLVYNAVGELVAPVINRRAIKADYLNANARQMQAVYKYQRTVLNAFT 358
Query: 29 ETHAALSKL 3
E ++K+
Sbjct: 359 EVVNRINKV 367
>tr|A5FBL1|A5FBL1_FLAJ1 RND efflux system, outer membrane
lipoprotein, NodT family OS=Flavobacterium johnsoniae
(strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_4409 PE=3
SV=1
Length = 478
Score = 155 bits (391), Expect = 2e-36
Identities = 77/189 (40%), Positives = 123/189 (65%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++ KIQKEA +LAV +F A++ ++ + G++++I + E+ +N LLGR PQ I R
Sbjct: 215 LKVVKIQKEAARVNELAVRRFEAQILSTQSLQFGIQQQITETENKINFLLGRFPQKIARN 274
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
++++ + + L R D+ +AE EL AAK D++ A+ +F P L +SA +G
Sbjct: 275 SNTFSSITPADIHAGVPSQLLENRPDIKKAEMELIAAKLDIKAAKAKFYPSLGISAGIGY 334
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
AFN KYL+ PES+L++ G L APLIN+ AI+A++ A A+Q+ A+YNYE+TL+ A+V
Sbjct: 335 EAFNAKYLLTSPESLLYSIAGDLVAPLINRNAIKAEYLTAGAKQIQAVYNYERTLVNAYV 394
Query: 29 ETHAALSKL 3
E LSK+
Sbjct: 395 EVANQLSKI 403
>tr|A3XM56|A3XM56_9FLAO Outer membrane efflux family protein
OS=Leeuwenhoekiella blandensis MED217 GN=MED217_10974
PE=4 SV=1
Length = 483
Score = 153 bits (386), Expect = 7e-36
Identities = 79/188 (42%), Positives = 120/188 (63%)
Frame = -1
Query: 566 QLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRKP 387
++ ++QKEA T LAV KF AEV ++ + +++ I + E+ +N L+GR PQ + R
Sbjct: 221 RIVRLQKEAARATGLAVSKFEAEVLHTKSLQFDIQQRIIEAENRINFLVGRFPQHVQRST 280
Query: 386 KDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGVN 207
DL + + + + L R DV QAE L AAK +V+ A+ F P L +SA +G
Sbjct: 281 DDLLMMKPKAIRAGIPAQLLENRTDVKQAELALEAAKLNVKVAKARFYPSLGISAGVGFE 340
Query: 206 AFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFVE 27
AFNPKYL+ PES+L++ G LTAPLIN+ I+A +A A+A+Q+ A+Y+YE+T+L A++E
Sbjct: 341 AFNPKYLLDTPESLLYSIAGELTAPLINRNEIKAAYASANAKQIQAVYDYERTVLNAYIE 400
Query: 26 THAALSKL 3
LSK+
Sbjct: 401 VANQLSKV 408
>tr|Q7UVX4|Q7UVX4_RHOBA Probable outer membrane lipoprotein IbeB
OS=Rhodopirellula baltica GN=ibeB PE=4 SV=1
Length = 614
Score = 149 bits (375), Expect = 1e-34
Identities = 78/189 (41%), Positives = 117/189 (61%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+ ++ KEA G QLAV++F AEV K E++ + +EI + E+ +N L+GR PQ + R
Sbjct: 351 LDISNAMKEAGRGNQLAVQRFQAEVHKNESERAVIAQEIVETENRINFLVGRYPQHVDRT 410
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
D L++ + + E L RAD+ +AE +AAA DV+ AR F P L ++ LG
Sbjct: 411 EVDFIDLNMQTLSAGVPSELLQNRADIREAERRVAAAGLDVKVARARFYPSLTLTGGLGW 470
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
NAF YL R PES++++ G + PLINKRAI+A + A+A QL ++YNY++T+L A V
Sbjct: 471 NAFATGYLFRTPESLIYSVAGDIVGPLINKRAIKADYQTANAVQLQSIYNYQQTVLEAHV 530
Query: 29 ETHAALSKL 3
E +SK+
Sbjct: 531 EVVNLVSKV 539
>tr|A3ZP01|A3ZP01_9PLAN Probable outer membrane lipoprotein IbeB
OS=Blastopirellula marina DSM 3645 GN=DSM3645_29257 PE=4
SV=1
Length = 606
Score = 147 bits (370), Expect = 5e-34
Identities = 75/189 (39%), Positives = 124/189 (65%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+++A+ QK+A GT+L V++F AEV K E+ ++++I + E+ +N L+GR PQ + R+
Sbjct: 227 LEVAQAQKDAARGTELGVQRFLAEVRKNESQLLIVKQDIIEVENRINFLVGRYPQPVDRQ 286
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
D +L + + + L R D++ AE E+AA+ D+ AR F P++ +SA +G
Sbjct: 287 AWDFISLDSNMLQVGVPAQLLRNRRDIIAAEREVAASGLDIMVARANFYPRVAISAGVGF 346
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
AFNP+YL P + + NA+G L APLINK+AI+A + A+A+QL A+YNY++T+L AF
Sbjct: 347 EAFNPRYLFD-PGAFIANAMGDLVAPLINKKAIQADYMNANARQLQAVYNYQRTILNAFT 405
Query: 29 ETHAALSKL 3
E +++K+
Sbjct: 406 EVVNSMAKV 414
>tr|A3HWZ5|A3HWZ5_9SPHI RND efflux system, outer membrane
lipoprotein, NodT OS=Algoriphagus sp. PR1 GN=ALPR1_18818
PE=4 SV=1
Length = 467
Score = 147 bits (370), Expect = 5e-34
Identities = 76/189 (40%), Positives = 119/189 (62%)
Frame = -1
Query: 569 VQLAKIQKEADAGTQLAVEKFAAEVAKGEADECGLREEIADREHTLNLLLGRLPQAIVRK 390
+ + K QKEA T+LAV +F A+V ++ + ++++I + E+ +N L+GR PQ + R
Sbjct: 204 LDIVKYQKEAARVTELAVRRFEAQVLDTKSLQFDIQQKIVETENRINFLVGRYPQHVARD 263
Query: 389 PKDLAALSLPSAEGALAVERLLARADVVQAEHELAAAKWDVETARKEFLPQLNVSAALGV 210
++ L + + + L R D+ QAE EL AAK DV+ A+ EF P L ++A +G
Sbjct: 264 HREFTDLIPDLVQSGIPSQLLANRPDIRQAELELEAAKIDVQVAKAEFYPSLRITAGVGF 323
Query: 209 NAFNPKYLVRLPESVLWNALGTLTAPLINKRAIRAQFAQADAQQLNALYNYEKTLLGAFV 30
NAF YL PES++++ G LTAPLIN+ AI+A + A+A+Q+ A+YNYE+T+L A+V
Sbjct: 324 NAFKGSYLFTSPESLIYSLAGELTAPLINRNAIKANYIGANAKQIQAIYNYEQTILNAYV 383
Query: 29 ETHAALSKL 3
E LS +
Sbjct: 384 EVVNQLSNI 392
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