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NBDC - LSDB Archive
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BP918496
Clone id YMU001_000114_B09
Library
Length 426
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACAGCCACCAGTGACCACAGTGGTTCTCCGCTTGCTCCGTTCTCAGCCCCAATTTGTTG
AGCTCCTCCAACTGCTTTTGGCCTTGCTCGATGTGCTGCCCCTGTCGAATGCTTTCAATG
CTTCATTGACCGGCGCTGCCCAGCACTGCTCGGCCCTGCAAATTTCCCGAGCTCGCAAAC
TTGACTGTTGACTCGACCTGCTATTGAGTGTTCGAGTGTGTGTGTGTGTGTGTAACACAC
AATCTTCGACTCCTGTTCTGGGTGCTTCTCTTGCGAGTCTACTGCCCGACCAGCTGCCGG
CCGGCTTCTGCCGACTTCTACTACTTCTCACGCTTTGTGCTTGCTTGACGCCTCCTGTCG
ACCTGCCGATTACTGAGCTCTCTGCCTGCCAGCGAGTGTGTGTGTGTGTGTGTGCGCGCG
CGCGCG
■■Homology search results ■■ -
sp_hit_id Q9BYQ7
Definition sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sapiens
Align length 76
Score (bit) 35.8
E-value 0.072
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918496|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_B09.
         (426 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sap...    36   0.072
sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo s...    32   1.4  
sp|P60368|KR102_HUMAN Keratin-associated protein 10-2 OS=Homo sa...    32   1.4  
sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo sa...    31   1.8  
sp|Q64507|KRA51_MOUSE Keratin-associated protein 5-1 OS=Mus musc...    30   3.0  
sp|P20945|ABAA_EMENI Regulatory protein abaA OS=Emericella nidul...    30   3.1  
sp|Q9BKJ9|LMPB_DICDI Lysosome membrane protein 2-B OS=Dictyostel...    30   4.0  
sp|Q85CS9|RR3_ANTFO 30S ribosomal protein S3, chloroplastic OS=A...    30   5.2  
sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo sap...    30   5.2  
sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE...    29   6.8  
sp|P77515|STFQ_ECOLI Side tail fiber protein homolog from lambdo...    29   7.0  
sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa...    29   8.8  

>sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo
           sapiens GN=KRTAP4-1 PE=2 SV=2
          Length = 127

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
 Frame = +2

Query: 209 CSSVCVCV*HTIFDSCSGCFSCESTARPAAG-----RLLPTSTTSHALCLLDASCRPADY 373
           CS    C       SC     C++T RP+ G     R L   TT    C + + CRP   
Sbjct: 49  CSQTTCCQTTCCRPSCCHPVCCQTTCRPSCGVSSCCRPLCCQTTCRPSCGVSSCCRP--- 105

Query: 374 *ALCLPASVCVCVCAR 421
             LC   + C   C R
Sbjct: 106 --LCCQTTCCRATCCR 119


>sp|P60412|KR10B_HUMAN Keratin-associated protein 10-11 OS=Homo
           sapiens GN=KRTAP10-11 PE=1 SV=1
          Length = 298

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 39/139 (28%), Positives = 47/139 (33%), Gaps = 12/139 (8%)
 Frame = +2

Query: 38  PFSAPIC*APPTAFGLARCAAPVECFQCFIDRRCPALLGPANFPSSQT*LLT-------- 193
           P SAP C AP  +  L     PV C        C A   P+   S  T   T        
Sbjct: 30  PCSAPSCCAPAPSLSLV--CTPVSCVS---SPCCQAACEPSACQSGCTSSCTPSCCQQSS 84

Query: 194 -RPAIECSSVC---VCV*HTIFDSCSGCFSCESTARPAAGRLLPTSTTSHALCLLDASCR 361
            +PA   SS C    CV       C     C      AA      S+   A C   +SC+
Sbjct: 85  CQPACCTSSPCQQACCVPVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCA-SSSCQ 143

Query: 362 PADY*ALCLPASVCVCVCA 418
           PA    +C     CV  C+
Sbjct: 144 PACCVPVCCKPVCCVSTCS 162


>sp|P60368|KR102_HUMAN Keratin-associated protein 10-2 OS=Homo
           sapiens GN=KRTAP10-2 PE=2 SV=1
          Length = 255

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = +2

Query: 209 CSSVCVCV*HTIFDSCSGCFSCESTARPA----AGRLLPTSTTSHALCLLDASCRPADY* 376
           C +   C   +   +C    SC+ + R      A   +PT + S + C   +SC+PA   
Sbjct: 115 CGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCT 174

Query: 377 ALCLPASVCVCVCAR 421
           +     S CV VC +
Sbjct: 175 SSPCQQSCCVSVCCK 189


>sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo
           sapiens GN=KRTAP10-6 PE=2 SV=1
          Length = 365

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
 Frame = +2

Query: 50  PIC*APPTAFGLARCAAPVECFQCFIDRRCPALLGPANFPSSQT*LLTRPAIE---CSSV 220
           P+C  P  +   + C     C  C     C A+  P+   S  T   T    +   C   
Sbjct: 158 PVCCKPVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPT 217

Query: 221 CVCV*HTIFDSCSGCFSCESTARPAAGRLLPTSTTSHALCLLDASCRPADY*ALCLPASV 400
           C C       +C     C           +PT +   + C   +SC+PA   +     + 
Sbjct: 218 C-CTSSPCQQACCVPVCCVPVC------CVPTCSEDSSSCCQQSSCQPACCTSSPCQHAC 270

Query: 401 CVCVCARA 424
           CV VC+ A
Sbjct: 271 CVPVCSGA 278


>sp|Q64507|KRA51_MOUSE Keratin-associated protein 5-1 OS=Mus
           musculus GN=Krtap5-1 PE=2 SV=1
          Length = 230

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/77 (27%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
 Frame = +2

Query: 209 CSSVCVCV*HTIFDSCSGCFSC---ESTARP----AAGRLLPTSTTSHALCLLDASCRPA 367
           C  VC CV      SC GC  C    S  +P      G     S+     C   + C+P 
Sbjct: 89  CKPVCCCVPVCSCSSCGGCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPC 148

Query: 368 DY*ALCLPASVCVCVCA 418
                C  +S C   C+
Sbjct: 149 -----CCQSSCCKPCCS 160


>sp|P20945|ABAA_EMENI Regulatory protein abaA OS=Emericella nidulans
           GN=abaA PE=4 SV=3
          Length = 796

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 156 GPSSAGQRRSMKH*KHSTGAAHRARPKAVGGAQQIGAENGASGEPLWS 13
           G S AG RR   + K      +RARP+          + G  GEP+WS
Sbjct: 103 GSSYAGSRRGRSYLKSQKYLEYRARPRR---------DTGKDGEPVWS 141


>sp|Q9BKJ9|LMPB_DICDI Lysosome membrane protein 2-B OS=Dictyostelium
           discoideum GN=lmpB PE=1 SV=1
          Length = 755

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 8   TSDHSGSPLAPFSAPIC*APPTAFGLARCAA 100
           TS  S +PL PFS PI    P+    A+C A
Sbjct: 219 TSTSSSTPLVPFSVPIIAGSPSDISQAQCQA 249


>sp|Q85CS9|RR3_ANTFO 30S ribosomal protein S3, chloroplastic
          OS=Anthoceros formosae GN=rps3 PE=2 SV=1
          Length = 218

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 68 EELNKLGLRTEQAENHCGHWW 6
          +++N LG R    +NHC HW+
Sbjct: 3  QKINPLGFRLGVTQNHCSHWF 23


>sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo
           sapiens GN=KRTAP4-3 PE=2 SV=2
          Length = 195

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
 Frame = +2

Query: 209 CSSVCVCV*HTIFDSCSGCFSCESTARPAAGRLLPTSTTS-HALCLLDASCRPADY*ALC 385
           C SVC         SC      ES  RP+  +     TT     C + + CRP+   + C
Sbjct: 6   CGSVCSD------QSCGQGLGQESCCRPSCCQTTCCRTTCCRPSCCISSCCRPSCCISSC 59

Query: 386 LPASVCVCVCAR 421
              S C   C R
Sbjct: 60  CKPSCCRTTCCR 71


>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1
            SV=2
          Length = 3230

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +2

Query: 26   SPLAPFSAPIC*APPTAFGLARCAAPVECFQCFIDRRCPALLGPANFPSS 175
            S + P S+P C  PP A        P     C +    P LLGP + P S
Sbjct: 2489 SQIPPCSSPAC-TPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPPSVPIS 2537
tr_hit_id A9UXT4
Definition tr|A9UXT4|A9UXT4_MONBE Predicted protein OS=Monosiga brevicollis
Align length 74
Score (bit) 36.2
E-value 0.82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918496|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_B09.
         (426 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9UXT4|A9UXT4_MONBE Predicted protein OS=Monosiga brevicollis...    36   0.82 
tr|Q5U9G5|Q5U9G5_ASPFU Abacus (Transcription factor AbaA) OS=Asp...    36   0.85 
tr|B0XNR1|B0XNR1_ASPFC Transcription factor AbaA OS=Aspergillus ...    36   0.85 
tr|B6KPM7|B6KPM7_TOXGO Putative uncharacterized protein OS=Toxop...    35   1.8  
tr|Q66C33|Q66C33_YERPS Putative racemase OS=Yersinia pseudotuber...    35   2.5  
tr|Q1CGZ0|Q1CGZ0_YERPN Racemase OS=Yersinia pestis bv. Antiqua (...    35   2.5  
tr|Q1C9P1|Q1C9P1_YERPA Putative racemase OS=Yersinia pestis bv. ...    35   2.5  
tr|Q0WGK8|Q0WGK8_YERPE Putative racemase OS=Yersinia pestis GN=Y...    35   2.5  
tr|B2JZP9|B2JZP9_YERPB Mandelate racemase/muconate lactonizing p...    35   2.5  
tr|B1JPU2|B1JPU2_YERPY Mandelate racemase/muconate lactonizing p...    35   2.5  
tr|A9R624|A9R624_YERPG Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|A7FJF1|A7FJF1_YERP3 Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|A4TKI5|A4TKI5_YERPP Racemase OS=Yersinia pestis (strain Pesto...    35   2.5  
tr|Q8CKY6|Q8CKY6_YERPE Putative uncharacterized protein (O-succi...    35   2.5  
tr|B0HT53|B0HT53_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|B0HFZ0|B0HFZ0_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|B0H2D8|B0H2D8_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|B0GWI5|B0GWI5_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|B0GGA2|B0GGA2_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|A9ZXP4|A9ZXP4_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|A9ZDF5|A9ZDF5_YERPE Mandelate racemase/muconate lactonizing e...    35   2.5  
tr|A6BS79|A6BS79_YERPE Putative racemase OS=Yersinia pestis CA88...    35   2.5  
tr|Q4SS19|Q4SS19_TETNG Chromosome undetermined SCAF14482, whole ...    30   3.6  
tr|Q91W93|Q91W93_MOUSE Novel member of the keratin associated pr...    34   4.1  
tr|B0CRT9|B0CRT9_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.1  
tr|A1D4E2|A1D4E2_NEOFI Transcription factor AbaA OS=Neosartorya ...    34   4.2  
tr|Q641J0|Q641J0_XENTR Fhl3 protein (Four and a half LIM domains...    33   5.3  
tr|B1H1D7|B1H1D7_XENTR Fhl5 protein OS=Xenopus tropicalis GN=fhl...    33   5.3  
tr|A7PIN7|A7PIN7_VITVI Chromosome chr13 scaffold_17, whole genom...    33   5.3  
tr|Q4T1H6|Q4T1H6_TETNG Chromosome undetermined SCAF10575, whole ...    27   6.3  

>tr|A9UXT4|A9UXT4_MONBE Predicted protein OS=Monosiga brevicollis
           GN=24812 PE=4 SV=1
          Length = 840

 Score = 36.2 bits (82), Expect = 0.82
 Identities = 26/74 (35%), Positives = 30/74 (40%)
 Frame = +2

Query: 194 RPAIECSSVCVCV*HTIFDSCSGCFSCESTARPAAGRLLPTSTTSHALCLLDASCRPADY 373
           R    C  VCVCV   +        SC S+A      LL  S     L L D+ C     
Sbjct: 9   RHLASCVCVCVCVCVCVRVPLPASLSCLSSAARVTDCLLSLS-----LSLSDSLCDSLFC 63

Query: 374 *ALCLPASVCVCVC 415
             LC+   VCVCVC
Sbjct: 64  VRLCVCVCVCVCVC 77


>tr|Q5U9G5|Q5U9G5_ASPFU Abacus (Transcription factor AbaA)
           OS=Aspergillus fumigatus GN=abaA PE=2 SV=1
          Length = 797

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 25/84 (29%), Positives = 36/84 (42%)
 Frame = -1

Query: 264 HPEQESKIVCYTHTHTLEHSIAGRVNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRA 85
           HP Q  +     H H   H +  RV ++     +  GP+ AG RR   + K      +RA
Sbjct: 68  HP-QPMQTATTLHPH---HILNARVQAKKLRRVQSLGPNHAGARRGRSYLKSQKYLEYRA 123

Query: 84  RPKAVGGAQQIGAENGASGEPLWS 13
           RP+          + G  GEP+WS
Sbjct: 124 RPR---------RDTGKDGEPVWS 138


>tr|B0XNR1|B0XNR1_ASPFC Transcription factor AbaA OS=Aspergillus
           fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163)
           GN=AFUB_005170 PE=4 SV=1
          Length = 797

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 25/84 (29%), Positives = 36/84 (42%)
 Frame = -1

Query: 264 HPEQESKIVCYTHTHTLEHSIAGRVNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRA 85
           HP Q  +     H H   H +  RV ++     +  GP+ AG RR   + K      +RA
Sbjct: 68  HP-QPMQTATTLHPH---HILNARVQAKKLRRVQSLGPNHAGARRGRSYLKSQKYLEYRA 123

Query: 84  RPKAVGGAQQIGAENGASGEPLWS 13
           RP+          + G  GEP+WS
Sbjct: 124 RPR---------RDTGKDGEPVWS 138


>tr|B6KPM7|B6KPM7_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_120420 PE=4 SV=1
          Length = 542

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = +2

Query: 137 CPALLGPANFPSSQT*LLTRPAIECSSVCVCV*--HTIFDS-CSGCFSCESTARPAAGRL 307
           C +L  PA+FP     L++  A    S CV +    ++ DS C     C S   PA+  L
Sbjct: 134 CSSLCLPASFPL----LVSLSACLFLSACVSLPASFSLLDSLCLPLSRCLSLCLPASFSL 189

Query: 308 LPTSTTSHALCLLDASCRPADY*ALCLPASVCVCVCA 418
           L     S + CL  ++C      ++CLP S+C+C+ A
Sbjct: 190 L----VSLSACLFPSACL-----SVCLPLSLCLCLSA 217


>tr|Q66C33|Q66C33_YERPS Putative racemase OS=Yersinia
           pseudotuberculosis GN=YPTB1577 PE=4 SV=1
          Length = 400

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 36  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 93

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 94  VWDLWSK--AEGKPLWRLVA 111


>tr|Q1CGZ0|Q1CGZ0_YERPN Racemase OS=Yersinia pestis bv. Antiqua
           (strain Nepal516) GN=YPN_2412 PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 61  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 118

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 119 VWDLWSK--AEGKPLWRLVA 136


>tr|Q1C9P1|Q1C9P1_YERPA Putative racemase OS=Yersinia pestis bv.
           Antiqua (strain Antiqua) GN=YPA_0863 PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 61  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 118

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 119 VWDLWSK--AEGKPLWRLVA 136


>tr|Q0WGK8|Q0WGK8_YERPE Putative racemase OS=Yersinia pestis
           GN=YPO1567 PE=4 SV=1
          Length = 400

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 36  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 93

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 94  VWDLWSK--AEGKPLWRLVA 111


>tr|B2JZP9|B2JZP9_YERPB Mandelate racemase/muconate lactonizing
           protein OS=Yersinia pseudotuberculosis serotype IB
           (strain PB1/+) GN=YPTS_1690 PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 61  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 118

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 119 VWDLWSK--AEGKPLWRLVA 136


>tr|B1JPU2|B1JPU2_YERPY Mandelate racemase/muconate lactonizing
           protein OS=Yersinia pseudotuberculosis serotype O:3
           (strain YPIII) GN=YPK_2508 PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 VCYTHTHTLEHSIAGR-VNSQVCELGKFAGPSSAGQRRSMKH*KHSTGAAHRARPKAVGG 64
           +C    H LEH I GR + S    +GKF    ++  +  ++      GA H A    +  
Sbjct: 61  ICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQ--LRWIGPEKGAIHLATGAVINA 118

Query: 63  AQQIGAENGASGEPLWSLVA 4
              + ++  A G+PLW LVA
Sbjct: 119 VWDLWSK--AEGKPLWRLVA 136