BP918507
Clone id YMU001_000114_C10
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTTCAATTATCAACCCAAACCTTATTTACTGCAGTCCAAGCCATAGCCAAGAAGCCAGA
GACAATACCAAAGATATTTATGATGGTACACCAAGTTCTTGGATCACATATCAATCAGCA
GATGATGCGTGGTCTCCTGCATCAACTGCACTCTCCATTAAGAGTTATATTACTCCACAC
ATACACTTCGTCAAGCCAACGAGCTACGACAATAGTACCCTCATGACCAATCCGGTCGGC
AACTCAAGGAAACATACCTGCCTTGAAAATAACAGGCGTTACTTCACAATAATGGGAAAA
AGTATGCTGTGGGAGAAACGGTGAAACCTTCAAAGGAATTAAATGCTTTTTTATGACAGC
ATTCCATTCAATGTTCTGGGAGATGTTGCTTTCTTTGGTGGCCACCATGATTTTCTGTGT
ATATCATTAGAACACAGCATCCGTTCGCCAAGCCCAATCACAAATCTCCTTCAACCCTTC
TCCAAGAAAAGAATAATTGACCTCTCGTGGCAGATAATACTG
■■Homology search results ■■ -
sp_hit_id Q5SCY9
Definition sp|Q5SCY9|CHLL_HUPLU Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein OS=Huperzia lucidula
Align length 16
Score (bit) 30.4
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918507|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_C10.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5SCY9|CHLL_HUPLU Light-independent protochlorophyllide reduc... 30 5.3
sp|Q6AIL0|CMOB_DESPS tRNA (mo5U34)-methyltransferase OS=Desulfot... 30 5.3
sp|P47393|Y147_MYCGE Uncharacterized protein MG147 OS=Mycoplasma... 30 6.9
sp|Q6XJV6|MO2R2_MOUSE Cell surface glycoprotein CD200 receptor 2... 30 7.0
sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=S... 30 9.0
sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus GN=SER... 30 9.0
sp|P36439|CHLL_POLAC Light-independent protochlorophyllide reduc... 30 9.0
sp|Q8N1I0|DOCK4_HUMAN Dedicator of cytokinesis protein 4 OS=Homo... 30 9.1

>sp|Q5SCY9|CHLL_HUPLU Light-independent protochlorophyllide
reductase iron-sulfur ATP-binding protein OS=Huperzia
lucidula GN=chlL PE=3 SV=1
Length = 292

Score = 30.4 bits (67), Expect = 5.3
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3

Query: 303 YAVGETVKPSKELNAF 350
Y VGETVK SKELNAF
Sbjct: 98 YVVGETVKLSKELNAF 113


>sp|Q6AIL0|CMOB_DESPS tRNA (mo5U34)-methyltransferase
OS=Desulfotalea psychrophila GN=cmoB PE=3 SV=1
Length = 320

Score = 30.4 bits (67), Expect = 5.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1

Query: 94 SSWITYQSADDAWSPASTALSIKSYITPHIHFVKPT 201
+ W+ ++S D P + L+++ Y PH FVK T
Sbjct: 282 TEWMEFESYKDFLDPENPELTLEGYPAPHRFFVKAT 317


>sp|P47393|Y147_MYCGE Uncharacterized protein MG147 OS=Mycoplasma
genitalium GN=MG147 PE=4 SV=1
Length = 375

Score = 30.0 bits (66), Expect = 6.9
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2

Query: 251 FLELPTG----LVMRVLLS*LVGLTKCMCGVI*LLMESAVDAGDH 129
FLEL T ++ +L+ LVGLT + G++ E +D GDH
Sbjct: 8 FLELKTNKNCKALLLLLIPLLVGLTLIIYGIVLFSTEGVIDHGDH 52


>sp|Q6XJV6|MO2R2_MOUSE Cell surface glycoprotein CD200 receptor 2
OS=Mus musculus GN=Cd200r1l PE=2 SV=1
Length = 249

Score = 30.0 bits (66), Expect = 7.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1

Query: 405 VATKESN---ISQNIEWNAVIKKHLIPLKVSPFLPQHTFSHYCEVT 277
V TKE+N + +NI W A H+ L++S QH ++ CE+T
Sbjct: 67 VETKETNETCLGRNITW-ASTPDHIPDLQISAVALQHEGNYLCEIT 111


>sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus
GN=Serinc1 PE=2 SV=1
Length = 453

Score = 29.6 bits (65), Expect = 9.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2

Query: 341 KCFFMTAFHSMFWEMLLSLVATMIFCVYH*NTASVRQAQSQISFN 475
+C++ + LLSLVA ++F VY+ + AS + ++ IS N
Sbjct: 192 RCWYAALLSATALNYLLSLVAVVLFFVYYTHPASCAENKAFISVN 236


>sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus
GN=SERINC1 PE=2 SV=1
Length = 453

Score = 29.6 bits (65), Expect = 9.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2

Query: 341 KCFFMTAFHSMFWEMLLSLVATMIFCVYH*NTASVRQAQSQISFN 475
+C++ + LLSLVA ++F VY+ + AS + ++ IS N
Sbjct: 192 RCWYAALLSATALNYLLSLVAVVLFFVYYTHPASCAENKAFISVN 236


>sp|P36439|CHLL_POLAC Light-independent protochlorophyllide
reductase iron-sulfur ATP-binding protein (Fragment)
OS=Polystichum acrostichoides GN=chlL PE=3 SV=1
Length = 160

Score = 29.6 bits (65), Expect = 9.0
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3

Query: 303 YAVGETVKPSKELNAF 350
Y VGETVKP KE NAF
Sbjct: 103 YVVGETVKPLKESNAF 118


>sp|Q8N1I0|DOCK4_HUMAN Dedicator of cytokinesis protein 4 OS=Homo
sapiens GN=DOCK4 PE=1 SV=2
Length = 1966

Score = 29.6 bits (65), Expect = 9.1
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1

Query: 28 YCSPSHSQEARDNTKDIYDGTPSSWITYQSADDAWSPASTALSIKSYITPHIHFVKPTSY 207
Y S S S +A +I + SS + SP++++LS +P++ P+S
Sbjct: 1641 YSSSSLSSQASAEVSNITGQSESSDEVFNMQP---SPSTSSLSSTHSASPNVTSSAPSSA 1697

Query: 208 DNSTLMTNPVGNSRKHTCLENNRR 279
S L+++ +SR+++CL R
Sbjct: 1698 RASPLLSDKHKHSRENSCLSPRER 1721


tr_hit_id Q4VV70
Definition tr|Q4VV70|Q4VV70_DANRE Rh30-like protein OS=Danio rerio
Align length 62
Score (bit) 33.1
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918507|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_C10.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4VV70|Q4VV70_DANRE Rh30-like protein OS=Danio rerio GN=rh30 ... 33 8.5

>tr|Q4VV70|Q4VV70_DANRE Rh30-like protein OS=Danio rerio GN=rh30
PE=2 SV=1
Length = 423

Score = 33.1 bits (74), Expect = 8.5
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2

Query: 5 QLSTQTLFTAVQAIAKKPETIPKIFMMVHQVLGSHINQQMMRGLLHQLHSPLRVILLHTY 184
+LST + A+ A+ K + + M + +V G +NQ ++R LLH + ++LLH +
Sbjct: 123 ELSTASALIAIGAVHGKTNPVQLLLMSLVEVTGFVVNQWILRTLLH-ADALYSIMLLHIF 181

Query: 185 TS 190
S
Sbjct: 182 GS 183