BP918511 |
Clone id |
YMU001_000114_D04 |
Library |
YMU01 |
Length |
496 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_D04. |
Accession |
BP918511 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1048Contig1 |
Sequence |
GCACATGGTCGGCTGGTGGCAGCAGAGGGCTCGTGGTGGCAACCCCACCATTTTCTTGTT CTGGTTCAGCTTCAAGGGATGCTGCTGTGCGGCTGGCAGGGTGGTCTAGTCTGCGGTTCG GATCTTCTGCTTAGTCAGTGCTCATCCATTCAGCAGGCGATAACCTTCGAAAGGGCATGG CTCCCTTGAAAGCCTGTGGATGCTTGGTTCTTGGTCCTCGTGTCGATGGTGTGTTTCTCA TCTTCTCCGAATGCTCTCCTTTTTAGTTGCTAGGTTGGTGGTGTGCTTGGCGCATGGCAT GCATAGGTGGCAGGGACTTCTCCATGGTAGCTCTTCGAGCAACTCCTGAGGTGATGGGGA CAATGGGCCCCTTCATTGCTTCGAACTTACTCTCGGTACGATGTCGGGTCGTTTTGGTTA TGGTTCTCTAGATTTAGCTGGGGCTTGCCTCCCCTGTTCGGGCACTTAATGTTGATGATT GTTCTCTTACAGTATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9R0Q2 |
Definition |
sp|Q9R0Q2|LT4R1_RAT Leukotriene B4 receptor 1 OS=Rattus norvegicus |
Align length |
92 |
Score (bit) |
34.7 |
E-value |
0.25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6HT48 |
Definition |
tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysogenum Wisconsin 54-1255 |
Align length |
113 |
Score (bit) |
36.2 |
E-value |
0.88 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918511|Adiantum capillus-veneris mRNA, clone: YMU001_000114_D04. (496 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysog... 36 0.88 tr|Q55Z85|Q55Z85_CRYNE Putative uncharacterized protein OS=Crypt... 36 1.2 tr|B0CZN6|B0CZN6_LACBS Predicted protein OS=Laccaria bicolor (st... 36 1.2 tr|Q5KNK0|Q5KNK0_CRYNE Putative uncharacterized protein OS=Crypt... 35 1.5 tr|A2R3M9|A2R3M9_ASPNC Contig An14c0170, complete genome OS=Aspe... 35 1.5 tr|Q4P0S7|Q4P0S7_USTMA Putative uncharacterized protein OS=Ustil... 35 2.6 tr|A5G1K5|A5G1K5_ACICJ ATP-dependent Clp protease, ATP-binding s... 34 3.4 tr|Q9FMG4|Q9FMG4_ARATH Similarity to splicing factor (At5g64200/... 34 3.4 tr|Q4QEY8|Q4QEY8_LEIMA Putative uncharacterized protein OS=Leish... 34 3.4 tr|B4LQW2|B4LQW2_DROVI GJ17502 OS=Drosophila virilis GN=GJ17502 ... 34 3.4 tr|Q6CFP6|Q6CFP6_YARLI YALI0B05038p (Putative zinc finger protei... 34 3.4 tr|A7EUQ1|A7EUQ1_SCLS1 Predicted protein OS=Sclerotinia scleroti... 34 4.4 tr|A7VJD3|A7VJD3_MOUSE LTB4 receptor OS=Mus musculus GN=Ltb4r1 P... 33 5.7 tr|O01771|O01771_CAEEL Trypsin-like protease protein 7 OS=Caenor... 33 5.7 tr|Q4T7D5|Q4T7D5_TETNG Chromosome undetermined SCAF8129, whole g... 33 7.3 tr|A6UDY7|A6UDY7_SINMW ABC transporter related OS=Sinorhizobium ... 33 7.3 tr|Q9FYB1|Q9FYB1_ARATH Splicing factor SC35 OS=Arabidopsis thali... 33 7.5 tr|P73485|P73485_SYNY3 Sll1132 protein OS=Synechocystis sp. (str... 33 9.5 tr|Q9CSQ9|Q9CSQ9_MOUSE Putative uncharacterized protein (Fragmen... 33 9.8 tr|Q825P8|Q825P8_STRAW Putative ABC transporter ATP-binding prot... 33 9.8 tr|A2U1V3|A2U1V3_9FLAO Two-component system sensor histidine kin... 33 9.8 tr|Q9VYE1|Q9VYE1_DROME CG10617 OS=Drosophila melanogaster GN=CG1... 33 9.8 tr|Q8MQJ2|Q8MQJ2_DROME RE01517p OS=Drosophila melanogaster GN=CG... 33 9.8 tr|Q55DC0|Q55DC0_DICDI WH2 domain-containing protein OS=Dictyost... 33 9.8
>tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysogenum Wisconsin 54-1255 GN=Pc22g08890 PE=4 SV=1 Length = 504
Score = 36.2 bits (82), Expect = 0.88 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 12/113 (10%) Frame = -1
Query: 367 PIVPITSGVARRATMEKSLPPMHAMRQAHHQPSN*KG-----------EHSEKMRNTPST 221 P P T V R +S+ +H R+A P++ G E E R T + Sbjct: 57 PSPPATPAVQRVVRSPRSVSSLHVNRRA---PASSMGVPRVRATSPGAEFREAQRITAAR 113
Query: 220 RGPRTKHPQA-FKGAMPFRRLSPAEWMSTD*AEDPNRRLDHPASRTAASLEAE 65 + KH +A + G PF L P S+D ++ P R PAS ++S A+ Sbjct: 114 KEAEEKHKRAVYGGPSPFTDLQPGSSASSDVSKQPAVRDSSPASVESSSSRAQ 166
>tr|Q55Z85|Q55Z85_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBA6030 PE=4 SV=1 Length = 3400
Score = 35.8 bits (81), Expect = 1.2 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%) Frame = -1
Query: 355 ITSGVARRA-TMEKSLPPMHAMRQAHHQPSN*K------GEHSEKMRNTPSTRGPRTKHP 197 +TS A RA ++ ++PP +++ + HQP+ + G + RNTPST G + P Sbjct: 2847 LTSQAASRAPSVHSAMPPHESLQASTHQPAVLEEVLLPDGRTAYIERNTPSTAG-ASAAP 2905
Query: 196 QAFKGAMPFRRLSPAEWMSTD*AEDPNRRLDHPASRTAASLEA--------EPEQENGGV 41 F GA+ R L+PA +D + P+ P +R ++L+ E E N V Sbjct: 2906 LPF-GALSVRSLAPA----SDHPDSPSLSPPPPGARPPSTLKKISSPSTSDETEHTNVSV 2960
Query: 40 ATTS 29 A S Sbjct: 2961 APKS 2964
>tr|B0CZN6|B0CZN6_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_323266 PE=4 SV=1 Length = 283
Score = 35.8 bits (81), Expect = 1.2 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Frame = -1
Query: 373 KGPIVPITSGVARRATMEKSLPP-----------------MHAMRQAHHQPSN*KGEHSE 245 KG P+T+GV++ A PP H+M + QPS + Sbjct: 128 KGTCKPLTTGVSKNAASVPEGPPRNKPALVDDLLNLQAAMQHSMAEGRTQPSVSSQTEED 187
Query: 244 KMRNTPSTRGPRTKHPQAFKGAMPFRRL 161 K TP RG +K F P+R L Sbjct: 188 KTETTPEDRGSMSKFNTIFWDIEPYREL 215
>tr|Q5KNK0|Q5KNK0_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNA06220 PE=4 SV=1 Length = 3157
Score = 35.4 bits (80), Expect = 1.5 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 7/102 (6%) Frame = -1
Query: 355 ITSGVARRA-TMEKSLPPMHAMRQAHHQPSN*K------GEHSEKMRNTPSTRGPRTKHP 197 +TS A RA ++ ++PP +++ + HQP+ + G + RNTPST G + P Sbjct: 2621 LTSQAASRAPSVHSAMPPHESLQASTHQPAVLEEVLLPDGRTAYIERNTPSTAG-ASAAP 2679
Query: 196 QAFKGAMPFRRLSPAEWMSTD*AEDPNRRLDHPASRTAASLE 71 F GA+ R L+PA +D + P+ P +R ++L+ Sbjct: 2680 LPF-GALSVRSLAPA----SDHPDSPSLSPPPPGARPPSTLK 2716
>tr|A2R3M9|A2R3M9_ASPNC Contig An14c0170, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An14g04860 PE=4 SV=1 Length = 795
Score = 35.4 bits (80), Expect = 1.5 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 1/91 (1%) Frame = -1
Query: 319 KSLPPMHAMRQAHHQPSN*KGEHSEKMRNTPSTRGPRTKHPQAFKGAMP-FRRLSPAEWM 143 KSL P R QPSN S PR +H + + P + P + Sbjct: 527 KSLEPRAGSRPEQKQPSN-------------SNEHPRPRHEHEHEQSKPKTSKAQPPDTS 573
Query: 142 STD*AEDPNRRLDHPASRTAASLEAEPEQEN 50 S+D +PN + HPA T + L+ +P ++ Sbjct: 574 SSD--PEPNTKPSHPAQTTTSPLKRKPSDQH 602
>tr|Q4P0S7|Q4P0S7_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM06286.1 PE=4 SV=1 Length = 1437
Score = 34.7 bits (78), Expect = 2.6 Identities = 25/93 (26%), Positives = 46/93 (49%) Frame = +1
Query: 211 LVLVSMVCFSSSPNALLFSC*VGGVLGAWHA*VAGTSPW*LFEQLLR*WGQWAPSLLRTY 390 LV++ MV + + + L + G + AW + + G S W +F + L + ++ T Sbjct: 609 LVVIFMVVYVLAAISRLATLRRNGRVAAWSSRLTGRSFWGMFCRPL-----FGRAVAATL 663
Query: 391 SRYDVGSFWLWFSRFSWGLPPLFGHLMLMIVLL 489 Y V +FW W SW +P + ++L+I L+ Sbjct: 664 QIYLVFAFWQWLRGDSW-VPDMLAAILLVIYLV 695
>tr|A5G1K5|A5G1K5_ACICJ ATP-dependent Clp protease, ATP-binding subunit clpA OS=Acidiphilium cryptum (strain JF-5) GN=Acry_2546 PE=3 SV=1 Length = 775
Score = 34.3 bits (77), Expect = 3.4 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1
Query: 211 RTKHPQAFKGAMPFRRLSPAEWMSTD*AEDPNRRLDHPASRTAASLEAEPEQE 53 R H F A RL ++S A+ P R + P S +A EAEPEQ+ Sbjct: 115 RESHAVYFLQAQDMTRLDAVNFISHGIAKSPGRSVPRPPSGSAEGTEAEPEQK 167
>tr|Q9FMG4|Q9FMG4_ARATH Similarity to splicing factor (At5g64200/MSJ1_4) (Putative uncharacterized protein At5g64200) OS=Arabidopsis thaliana GN=At5g64200 PE=1 SV=1 Length = 303
Score = 34.3 bits (77), Expect = 3.4 Identities = 28/95 (29%), Positives = 43/95 (45%) Frame = -1
Query: 337 RRATMEKSLPPMHAMRQAHHQPSN*KGEHSEKMRNTPSTRGPRTKHPQAFKGAMPFRRLS 158 RR T +S P R+ + N HS + +P+ R PR+ PQ P R +S Sbjct: 181 RRRTRSRSASP-DEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQK---TSPAREVS 236
Query: 157 PAEWMSTD*AEDPNRRLDHPASRTAASLEAEPEQE 53 P + S + + P R L + R+ A +A P +E Sbjct: 237 P-DKRSNERSPSPRRSL---SPRSPALQKASPSKE 267
>tr|Q4QEY8|Q4QEY8_LEIMA Putative uncharacterized protein OS=Leishmania major GN=LmjF16.0320 PE=4 SV=1 Length = 1270
Score = 34.3 bits (77), Expect = 3.4 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 21/98 (21%) Frame = -1
Query: 394 ESKFEAMKGPIVPITSG-------------------VARRATMEKSLPPMH--AMRQAHH 278 +++ A KG + P+TS V RA KS+P + A+ Sbjct: 768 DTESSAAKGAVPPLTSSSSTSPATAGPTGGTTAAVMVLHRAGQPKSVPALTTPAVAAPAG 827
Query: 277 QPSN*KGEHSEKMRNTPSTRGPRTKHPQAFKGAMPFRR 164 +P+ K +HSE+M P +G T HP +P RR Sbjct: 828 EPAPSKPKHSERMNGNPIGKGSETAHP-----PLPIRR 860
>tr|B4LQW2|B4LQW2_DROVI GJ17502 OS=Drosophila virilis GN=GJ17502 PE=4 SV=1 Length = 1850
Score = 34.3 bits (77), Expect = 3.4 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = -1
Query: 229 PSTRGPRTKHPQAFKGAMPFRR-LSPAEWMSTD*AEDPNRRLDHPASRTA-ASLEAEPEQ 56 P R P +K P A A PFR+ + A ++ A P PA+ +A + P++ Sbjct: 910 PPPRPPSSKQPDASSQANPFRKTIESAATATSSVAPSPLLSFFTPAANSADCNFFGSPQE 969
Query: 55 ENGGVATTSPLLPPADHV 2 VA P LPPA V Sbjct: 970 ATQQVAAQFPELPPASGV 987
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