BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918520|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_E01.
         (379 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O44081|DKC1_DROME H/ACA ribonucleoprotein complex subunit 4 O...    30   3.7  
sp|Q8CPM2|CTAA_STAES Heme A synthase OS=Staphylococcus epidermid...    30   3.7  
sp|Q5HQ52|CTAA_STAEQ Heme A synthase OS=Staphylococcus epidermid...    30   3.7  
sp|Q9ESZ0|XRCC1_RAT DNA repair protein XRCC1 OS=Rattus norvegicu...    29   8.2  
sp|Q60596|XRCC1_MOUSE DNA repair protein XRCC1 OS=Mus musculus G...    29   8.2  

>sp|O44081|DKC1_DROME H/ACA ribonucleoprotein complex subunit 4
           OS=Drosophila melanogaster GN=Nop60B PE=1 SV=1
          Length = 508

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +1

Query: 175 RLVNVPSQEATTAAKATQSXXXXXXXXXXXTPLERKKREQGKAKIDDEGPKKRPRPTEPL 354
           R ++  S E T AA  ++            TP + KK+++ K K D+E P+      EP+
Sbjct: 439 RKLSTSSVEETAAAAVSEE-----------TPSKDKKKKKKKHKGDEEAPEAAEEEAEPV 487

Query: 355 EEPAHK 372
           E+   K
Sbjct: 488 EKEKKK 493


>sp|Q8CPM2|CTAA_STAES Heme A synthase OS=Staphylococcus epidermidis
           (strain ATCC 12228) GN=ctaA PE=3 SV=1
          Length = 302

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 197 WLGTLTSLVLNLVAIGGALVYTXXXXXXXXXSHKFCSGA 81
           WLG L ++++  V +GGALV           S   C+GA
Sbjct: 9   WLGVLATIIMTFVQLGGALVTKTGSEDGCGSSWPLCNGA 47


>sp|Q5HQ52|CTAA_STAEQ Heme A synthase OS=Staphylococcus epidermidis
           (strain ATCC 35984 / RP62A) GN=ctaA PE=3 SV=1
          Length = 302

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 197 WLGTLTSLVLNLVAIGGALVYTXXXXXXXXXSHKFCSGA 81
           WLG L ++++  V +GGALV           S   C+GA
Sbjct: 9   WLGVLATIIMTFVQLGGALVTKTGSEDGCGSSWPLCNGA 47


>sp|Q9ESZ0|XRCC1_RAT DNA repair protein XRCC1 OS=Rattus norvegicus
           GN=Xrcc1 PE=2 SV=2
          Length = 631

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 280 KKREQGKAKIDDEGPKKRPRPTEPLEEPA 366
           +KR Q KAK    GP   PRP  P E  A
Sbjct: 430 RKRPQPKAKTQAAGPSSPPRPPTPEETKA 458


>sp|Q60596|XRCC1_MOUSE DNA repair protein XRCC1 OS=Mus musculus
           GN=Xrcc1 PE=1 SV=2
          Length = 631

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 280 KKREQGKAKIDDEGPKKRPRPTEPLEEPA 366
           +KR Q KAK    GP   PRP  P E  A
Sbjct: 430 QKRPQPKAKTQAAGPSSPPRPPTPKETKA 458

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918520|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_E01.
         (379 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1E0I3|Q1E0I3_COCIM Putative uncharacterized protein OS=Cocci...    38   0.22 
tr|B0WAM8|B0WAM8_CULQU Putative uncharacterized protein OS=Culex...    34   4.1  

>tr|Q1E0I3|Q1E0I3_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_03930 PE=4 SV=1
          Length = 618

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = +1

Query: 79  PAPEQNLWLLRKNDDEEEV*TRAPPMATRLRTRLVNVPSQEATTAAKATQSXXXXXXXXX 258
           P+   NL  L  +DDEEE    A   A  LR    N  ++   T A+ T S         
Sbjct: 254 PSARSNLQPLESDDDEEEARAEAFEEAYNLRFEDPNKLNEALVTHARDTTSKFSVRREEP 313

Query: 259 XXTP----LERKKREQGKAKIDDEGPKKRPRPTEPLEEPAHKV 375
                   +ER K+E+ K + D+E  + R    E LEE   K+
Sbjct: 314 SGRKRKREVERLKKEEEKKQRDEERARLRKLKIEELEEQVEKI 356


>tr|B0WAM8|B0WAM8_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ003939 PE=4 SV=1
          Length = 1982

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/89 (22%), Positives = 37/89 (41%)
 Frame = +1

Query: 109 RKNDDEEEV*TRAPPMATRLRTRLVNVPSQEATTAAKATQSXXXXXXXXXXXTPLERKKR 288
           +K    E +  +AP      + R     S+++  ++K + +            P  RKK+
Sbjct: 323 KKGRKSEPIPEKAPEELPEKKARRSESVSRKSDVSSKKSDTPIVKSTPPSRKAPRGRKKK 382

Query: 289 EQGKAKIDDEGPKKRPRPTEPLEEPAHKV 375
           E+      +E   + P P   +EEPA +V
Sbjct: 383 EEDSPPAPEEATPEAPAPPVVVEEPAEEV 411