BP918527
Clone id YMU001_000114_E10
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTACCGTGCCCATACACCACTTCCTACATGCATCTCCCTCTGAGCACTCATCAACTGC
ACATGGGCAATCTTCCACTTCATGCCTCCAACTCATGCATACCTTGCATTTCTTCCTCTT
CTGCTTTTGACTCCCCATGGCGCTTGTCCGCTAGAACTTTCATTTGAAATTTGGCAGCTT
TCTGACTTCCACGTTTGCAACAGTTCTAATTCTATATTCCGCAGTTTGACTTCAAACTTT
GCAACCGTCATTCTGATTTGAATTCTAATTCTGTCAACTTATCTGATTCCTGATTCTTGT
GGTGCTCATTTTCTTGCCCTTCCTCCTAGTGGAACTTGACTCCCATAACTCCCCCCTAGT
GAAACTGATCTCCCGGAATTTCTTCCTGGTGACCCTCAAAATCTGTGATAATAAATCTGG
CTCATCTTCCACTCTTCCTTTTGTCTATCTCTCAGATAATCCTCTGGTACATCCAAATTT
TCTTGTCCAATCTGGATGTGTGTCCTCTTTTGCTTCTTCTAGGGAAACATCTGAATTTTG
ATGACTTT
■■Homology search results ■■ -
sp_hit_id Q90243
Definition sp|Q90243|VIT_ACITR Vitellogenin (Fragment) OS=Acipenser transmontanus
Align length 64
Score (bit) 30.4
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918527|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_E10.
(535 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q90243|VIT_ACITR Vitellogenin (Fragment) OS=Acipenser transmo... 30 5.6
sp|Q6AZ60|EGFL7_RAT EGF-like domain-containing protein 7 OS=Ratt... 30 9.7

>sp|Q90243|VIT_ACITR Vitellogenin (Fragment) OS=Acipenser
transmontanus PE=2 SV=1
Length = 1677

Score = 30.4 bits (67), Expect = 5.6
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3

Query: 518 KKQKRTHIQIGQENLDVPEDYLRDRQ----KEEWKMSQIYYHRF*GSPGRNSGRSVSLGG 351
+ +KR ENL+ D++R +Q K+EWK Q +H+ P +S S S G
Sbjct: 1123 RMEKRMEQDKLTENLERDRDHMRGKQSKNKKQEWKNKQKKHHK--QLPSSSSSSSSSSSG 1180

Query: 350 SYGS 339
S S
Sbjct: 1181 SNSS 1184


>sp|Q6AZ60|EGFL7_RAT EGF-like domain-containing protein 7 OS=Rattus
norvegicus GN=Egfl7 PE=2 SV=1
Length = 279

Score = 29.6 bits (65), Expect = 9.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2

Query: 111 KCKVCMSWRHEVEDCPCAVDECSEGDA-CRKWCMGTV 4
+C+ + W+ + C VDECS G+A C + C+ TV
Sbjct: 127 RCRCPVGWQGDT--CQIDVDECSTGEARCPQRCVNTV 161


tr_hit_id B6PCX6
Definition tr|B6PCX6|B6PCX6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 48
Score (bit) 33.5
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918527|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_E10.
(535 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6PCX6|B6PCX6_BRAFL Putative uncharacterized protein OS=Branc... 33 7.0

>tr|B6PCX6|B6PCX6_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_105506 PE=4 SV=1
Length = 1088

Score = 33.5 bits (75), Expect = 7.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Frame = -3

Query: 518 KKQKRTHIQIGQEN---------LDVPEDYLRDRQKEEWKMSQIYYHR 402
K+Q++ +Q G+EN D P+ +RD +++W+ + I +HR
Sbjct: 628 KRQRQLELQCGEENRTQATLDMLFDSPDKLIRDFARKKWQQAMIQFHR 675