BP918531 |
Clone id |
YMU001_000114_F02 |
Library |
YMU01 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_F02. |
Accession |
BP918531 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2583Contig1 |
Sequence |
ATCTTACCAAGTCAAGCAAAGCAATGACAGAGCAGGAAGCAAGAATGATTTTGGGTATCA ACGAGAAGGCATCGGTGGAGGAGATGCTACAGAGATATGAGAACCTTTTTGAGAGAAATG CAAAGTCTGGCAGTTTCTATTTGCAGTCAAAAGTTCAAAGAGCGAAAGAGTGTTTAGAAG CTTCACAACAGGCTAAAGCGGATCCGAACACGTAGAGGGGATTTCCTTCGTGGAGGCAAG GTTTAACATAATGTTGTAGCTGCTTATCTTGGCAGATTGATTATCATTCGAATGTGCTTA TAAGGGAGGTATTCAAATGGGTACTTTGTATTGGATCAGTCTAGAAAGGTCAGATCTTAA AACCCCGGCGTTTCAGTAGTGACAAAACACTGCTGAAACACAGGTTATGGGGTTCAGCTG TTTACATGGGTTGGCCCATGAGTGGCAGCAGGAAAAATTTCAAGGGTTGTATAGGCTTGC AGTAGTCTTTCTGACATGTCAAGTTCATGTTGATGAACTCGAGTTTATCGAGTGGTAGTG GCTATTCTGCTACACGCTCCCTGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9VF08 |
Definition |
sp|Q9VF08|TIM16_DROME Mitochondrial import inner membrane translocase subunit Tim16 OS=Drosophila melanogaster |
Align length |
65 |
Score (bit) |
54.3 |
E-value |
4.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918531|Adiantum capillus-veneris mRNA, clone: YMU001_000114_F02. (565 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9VF08|TIM16_DROME Mitochondrial import inner membrane transl... 54 4e-07 sp|Q7S6S4|TIM16_NEUCR Mitochondrial import inner membrane transl... 52 2e-06 sp|Q9CQV1|TIM16_MOUSE Mitochondrial import inner membrane transl... 52 3e-06 sp|Q9Y3D7|TIM16_HUMAN Mitochondrial import inner membrane transl... 52 3e-06 sp|Q4I375|TIM16_GIBZE Mitochondrial import inner membrane transl... 51 4e-06 sp|Q6EIX2|TIM16_RAT Mitochondrial import inner membrane transloc... 49 2e-05 sp|Q5M995|TI16B_XENLA Mitochondrial import inner membrane transl... 49 2e-05 sp|Q6NTU3|TI16A_XENLA Mitochondrial import inner membrane transl... 48 3e-05 sp|Q6PBL0|TIM16_DANRE Mitochondrial import inner membrane transl... 48 4e-05 sp|Q5XGJ0|TIM16_XENTR Mitochondrial import inner membrane transl... 47 5e-05 sp|Q5B187|TIM16_EMENI Mitochondrial import inner membrane transl... 46 1e-04 sp|Q9C1W5|TIM16_SCHPO Mitochondrial import inner membrane transl... 44 4e-04 sp|Q60RS2|TIM16_CAEBR Mitochondrial import inner membrane transl... 43 0.001 sp|Q754J4|TIM16_ASHGO Mitochondrial import inner membrane transl... 42 0.003 sp|O62250|TIM16_CAEEL Mitochondrial import inner membrane transl... 41 0.005 sp|Q78YY6|DJC15_MOUSE DnaJ homolog subfamily C member 15 OS=Mus ... 39 0.014 sp|Q6CK35|TIM16_KLULA Mitochondrial import inner membrane transl... 39 0.023 sp|P42949|TIM16_YEAST Mitochondrial import inner membrane transl... 37 0.051 sp|Q6FT88|TIM16_CANGA Mitochondrial import inner membrane transl... 36 0.15 sp|Q54SV6|TIM16_DICDI Mitochondrial import inner membrane transl... 35 0.20 sp|Q59ZW9|TIM16_CANAL Mitochondrial import inner membrane transl... 35 0.25 sp|Q6C331|TIM16_YARLI Mitochondrial import inner membrane transl... 32 1.7 sp|Q6FEJ4|TGT_ACIAD Queuine tRNA-ribosyltransferase OS=Acinetoba... 32 2.8 sp|P57967|COAA_PASMU Pantothenate kinase OS=Pasteurella multocid... 31 3.7 sp|Q6BXP3|TIM16_DEBHA Mitochondrial import inner membrane transl... 30 6.3 sp|B0TYY3|TGT_FRAP2 Queuine tRNA-ribosyltransferase OS=Francisel... 30 8.2 sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pon... 30 8.2 sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Hom... 30 8.2
>sp|Q9VF08|TIM16_DROME Mitochondrial import inner membrane translocase subunit Tim16 OS=Drosophila melanogaster GN=blp PE=2 SV=1 Length = 141
Score = 54.3 bits (129), Expect = 4e-07 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = +3
Query: 24 MTEQEARMILGINEKASVEEMLQRYENLFERN--AKSGSFYLQSKVQRAKECLEASQQAK 197 MT +EA+ IL I++ +V+ + + YE+LF+ N +K GSFY+QSKV RAKE L+ +A Sbjct: 56 MTLEEAKQILNIDDPKNVDAITKNYEHLFQVNERSKGGSFYIQSKVFRAKERLDHEIKAH 115
Query: 198 ADPNT 212 P + Sbjct: 116 EQPRS 120
>sp|Q7S6S4|TIM16_NEUCR Mitochondrial import inner membrane translocase subunit tim-16 OS=Neurospora crassa GN=pam-16 PE=3 SV=1 Length = 141
Score = 52.4 bits (124), Expect = 2e-06 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 7/70 (10%) Frame = +3
Query: 15 SKAMTEQEARMILGINEKA-----SVEEMLQRYENLFERN--AKSGSFYLQSKVQRAKEC 173 + MT EA IL +N+ A ++EE+++R++ LF+ N K GSFYLQSKV RA+E Sbjct: 52 TSGMTLDEACKILNVNKPADGTAANMEEVMERFKRLFDANDPEKGGSFYLQSKVVRARER 111
Query: 174 LEASQQAKAD 203 LEA + K + Sbjct: 112 LEAEIKPKME 121
>sp|Q9CQV1|TIM16_MOUSE Mitochondrial import inner membrane translocase subunit Tim16 OS=Mus musculus GN=Timm16 PE=2 SV=1 Length = 125
Score = 51.6 bits (122), Expect = 3e-06 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = +3
Query: 33 QEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLEASQQAKADP 206 QEA+ IL ++ K S EE+ + YE+LF+ N KS GSFYLQSKV RAKE L+ + +A Sbjct: 57 QEAQQILNVS-KLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115
Query: 207 NT*RG 221 + +G Sbjct: 116 DREKG 120
>sp|Q9Y3D7|TIM16_HUMAN Mitochondrial import inner membrane translocase subunit Tim16 OS=Homo sapiens GN=TIMM16 PE=1 SV=2 Length = 125
Score = 51.6 bits (122), Expect = 3e-06 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = +3
Query: 33 QEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLEASQQAKADP 206 QEA+ IL ++ K S EE+ + YE+LF+ N KS GSFYLQSKV RAKE L+ + +A Sbjct: 57 QEAQQILNVS-KLSPEEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115
Query: 207 NT*RG 221 + +G Sbjct: 116 DREKG 120
>sp|Q4I375|TIM16_GIBZE Mitochondrial import inner membrane translocase subunit TIM16 OS=Gibberella zeae GN=PAM16 PE=3 SV=1 Length = 138
Score = 50.8 bits (120), Expect = 4e-06 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 6/61 (9%) Frame = +3
Query: 15 SKAMTEQEARMILGINE----KASVEEMLQRYENLFERN--AKSGSFYLQSKVQRAKECL 176 S MT EA IL + +A+VEE+L RY+ LF+ N K GSFYLQSK+ RAKE Sbjct: 51 SSGMTLDEACKILNVKPPAGGQANVEEVLSRYKRLFDANDPQKGGSFYLQSKIVRAKERF 110
Query: 177 E 179 E Sbjct: 111 E 111
>sp|Q6EIX2|TIM16_RAT Mitochondrial import inner membrane translocase subunit Tim16 OS=Rattus norvegicus GN=Timm16 PE=3 SV=1 Length = 124
Score = 48.5 bits (114), Expect = 2e-05 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Frame = +3
Query: 33 QEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLEASQQAKADP 206 QEA+ IL I+ K S EE+ Q YE+LF+ N KS SFYLQSKV RAKE L+ Q +A Sbjct: 57 QEAQQILNIS-KLSPEEV-QNYEHLFKVNDKSVGDSFYLQSKVVRAKERLDEELQIQAQE 114
Query: 207 NT*RG 221 + +G Sbjct: 115 DREKG 119
>sp|Q5M995|TI16B_XENLA Mitochondrial import inner membrane translocase subunit Tim16-B OS=Xenopus laevis GN=timm16-B PE=2 SV=1 Length = 122
Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = +3
Query: 12 SSKAMTEQEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLEAS 185 S ++ QEA+ IL ++ K + EE+ + YE+LF+ N K+ GSFYLQSKV RAKE L+ Sbjct: 50 SLSGISFQEAQQILNVS-KLTPEEIQKNYEHLFKVNDKAVGGSFYLQSKVVRAKERLDQE 108
Query: 186 QQAKA 200 + ++ Sbjct: 109 MEIQS 113
>sp|Q6NTU3|TI16A_XENLA Mitochondrial import inner membrane translocase subunit Tim16-A OS=Xenopus laevis GN=timm16-A PE=2 SV=1 Length = 125
Score = 48.1 bits (113), Expect = 3e-05 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Frame = +3
Query: 12 SSKAMTEQEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLEAS 185 S ++ QEA+ IL ++ K + EE+ + YE+LF+ N K GSFYLQSKV RAKE L+ Sbjct: 50 SLSGISLQEAQQILNVS-KLTPEEIQKNYEHLFKVNDKGLGGSFYLQSKVVRAKERLDQE 108
Query: 186 QQAKA 200 + ++ Sbjct: 109 MEIQS 113
>sp|Q6PBL0|TIM16_DANRE Mitochondrial import inner membrane translocase subunit Tim16 OS=Danio rerio GN=timm16 PE=2 SV=1 Length = 129
Score = 47.8 bits (112), Expect = 4e-05 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%) Frame = +3
Query: 12 SSKAMTEQEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLE 179 S MT QEA+ IL I+ + EE+ + YE+LF+ N K+ GSFY+QSKV RAKE L+ Sbjct: 50 SFTGMTLQEAQQILNIST-LTPEEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106
>sp|Q5XGJ0|TIM16_XENTR Mitochondrial import inner membrane translocase subunit Tim16 OS=Xenopus tropicalis GN=timm16 PE=2 SV=1 Length = 125
Score = 47.4 bits (111), Expect = 5e-05 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 2/58 (3%) Frame = +3
Query: 12 SSKAMTEQEARMILGINEKASVEEMLQRYENLFERNAKS--GSFYLQSKVQRAKECLE 179 S ++ QEA+ IL ++ K + EE+ + YE+LF+ N K GSFYLQSKV RAKE L+ Sbjct: 50 SLSGISLQEAQQILNVS-KLTPEEIQKNYEHLFKVNDKEVGGSFYLQSKVVRAKERLD 106
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKA7 |
Definition |
tr|A9NKA7|A9NKA7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
64 |
Score (bit) |
99.4 |
E-value |
1.0e-19 |
Report |
|