BP918533 |
Clone id |
YMU001_000114_F06 |
Library |
YMU01 |
Length |
425 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_F06. |
Accession |
BP918533 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACTATGATAAGCAACTTGAGACACAAAGTAAGGCACTTTGGAGTATCAAAGACGAGTTG AAGAAAAATGTTGACACTAATGAGCTGCGCATGATGCTTGAAGAGAATGGGCAAGAGACA AGTGGTTCTGAGTATGATTTGAGGGAGCGTTGTGCGGATGGCATGCTTTTTGGTGCTCTT GGACCATGCCCTACATGTAATGGTCCCATTGAAATCCATGGGGGCCAGTATAGATGTCGG GGGAATCTTTCAGAATGGAGCAAGTGTACCTATACTACAAGGTCTCCCGAGCGGCTACAG GGCAAGTGGAAGATACCTGAAGATTCAGATAATAGTTATTTGAAAAAGTGGTTCAAGAGT CAGAAAGCAAAAAAGGAGAAGAGACTCTTTTCCACCAAGCTTCCCAGTGCAGAGAACAGG TCAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7EYV7 |
Definition |
sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica |
Align length |
132 |
Score (bit) |
176.0 |
E-value |
4.0e-44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QVS5 |
Definition |
tr|A7QVS5|A7QVS5_VITVI Chromosome chr7 scaffold_192, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
127 |
Score (bit) |
183.0 |
E-value |
3.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918533|Adiantum capillus-veneris mRNA, clone: YMU001_000114_F06. (425 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QVS5|A7QVS5_VITVI Chromosome chr7 scaffold_192, whole genom... 183 3e-45 tr|A5AIW8|A5AIW8_VITVI Putative uncharacterized protein OS=Vitis... 183 3e-45 tr|B8B5F6|B8B5F6_ORYSI Putative uncharacterized protein OS=Oryza... 176 7e-43 tr|A3BIX4|A3BIX4_ORYSJ Putative uncharacterized protein OS=Oryza... 176 7e-43 tr|A9SSX0|A9SSX0_PHYPA Predicted protein OS=Physcomitrella paten... 163 4e-39 tr|B8A188|B8A188_MAIZE Putative uncharacterized protein OS=Zea m... 161 1e-38 tr|A7RNW1|A7RNW1_NEMVE Predicted protein (Fragment) OS=Nematoste... 110 3e-23 tr|B6PZ38|B6PZ38_BRAFL Putative uncharacterized protein OS=Branc... 104 2e-21 tr|B6N2Q1|B6N2Q1_BRAFL Putative uncharacterized protein OS=Branc... 104 2e-21 tr|Q921K2|Q921K2_MOUSE Poly (ADP-ribose) polymerase family, memb... 100 4e-20 tr|Q3U868|Q3U868_MOUSE Putative uncharacterized protein (Fragmen... 100 4e-20 tr|Q3TX36|Q3TX36_MOUSE Putative uncharacterized protein OS=Mus m... 100 4e-20 tr|Q3TM68|Q3TM68_MOUSE Putative uncharacterized protein OS=Mus m... 100 4e-20 tr|Q3TIV3|Q3TIV3_MOUSE Putative uncharacterized protein OS=Mus m... 100 4e-20 tr|B4E0E1|B4E0E1_HUMAN cDNA FLJ53442, highly similar to Poly (AD... 100 5e-20 tr|B2R5W3|B2R5W3_HUMAN cDNA, FLJ92658, highly similar to Homo sa... 100 5e-20 tr|B1ANJ4|B1ANJ4_HUMAN Poly (ADP-ribose) polymerase 1 OS=Homo sa... 100 5e-20 tr|Q3UJ03|Q3UJ03_MOUSE Putative uncharacterized protein OS=Mus m... 99 8e-20 tr|Q3TF18|Q3TF18_MOUSE Putative uncharacterized protein OS=Mus m... 99 8e-20 tr|Q5RHR0|Q5RHR0_DANRE Novel protein similar to vertebrate ADP-r... 98 2e-19 tr|Q499A8|Q499A8_DANRE Poly (ADP-ribose) polymerase family, memb... 98 2e-19 tr|Q2NLA7|Q2NLA7_XENLA PARP protein OS=Xenopus laevis GN=parp1 P... 97 3e-19 tr|B8AIZ7|B8AIZ7_ORYSI Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|B7ETH1|B7ETH1_ORYSJ cDNA clone:J033102J07, full insert sequen... 97 5e-19 tr|A3A7L2|A3A7L2_ORYSJ Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|B3RJY6|B3RJY6_TRIAD Putative uncharacterized protein OS=Trich... 89 1e-16 tr|B7PWC4|B7PWC4_IXOSC Poly [ADP-ribose] polymerase, putative OS... 81 2e-14 tr|B4K4G8|B4K4G8_DROMO GI23619 OS=Drosophila mojavensis GN=GI236... 80 4e-14 tr|A5AUF8|A5AUF8_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A7QFD4|A7QFD4_VITVI Chromosome undetermined scaffold_87, whol... 79 1e-13
>tr|A7QVS5|A7QVS5_VITVI Chromosome chr7 scaffold_192, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007500001 PE=4 SV=1 Length = 947
Score = 183 bits (465), Expect = 3e-45 Identities = 80/127 (62%), Positives = 103/127 (81%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 +++LE QSK +W++KD+LKK+V T ELR MLE NGQ+++GSE DLR+RCADGMLFGALG Sbjct: 216 ERKLEAQSKEIWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDRCADGMLFGALGH 275
Query: 187 CPTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQK 366 CP C+ + GG YRC+G LS WSKC+Y+T PER++GKWKIPE++ N YL+KWFKSQK Sbjct: 276 CPLCSSSLRYSGGMYRCQGYLSAWSKCSYSTVEPERIKGKWKIPEETSNQYLRKWFKSQK 335
Query: 367 AKKEKRL 387 KK R+ Sbjct: 336 GKKPVRV 342
>tr|A5AIW8|A5AIW8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037618 PE=4 SV=1 Length = 1016
Score = 183 bits (465), Expect = 3e-45 Identities = 80/127 (62%), Positives = 103/127 (81%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 +++LE QSK +W++KD+LKK+V T ELR MLE NGQ+++GSE DLR+RCADGMLFGALG Sbjct: 242 ERKLEAQSKEIWALKDDLKKHVTTAELREMLEANGQDSTGSELDLRDRCADGMLFGALGH 301
Query: 187 CPTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQK 366 CP C+ + GG YRC+G LS WSKC+Y+T PER++GKWKIPE++ N YL+KWFKSQK Sbjct: 302 CPLCSSSLRYSGGMYRCQGYLSAWSKCSYSTVEPERIKGKWKIPEETSNQYLRKWFKSQK 361
Query: 367 AKKEKRL 387 KK R+ Sbjct: 362 GKKPVRV 368
>tr|B8B5F6|B8B5F6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25738 PE=4 SV=1 Length = 977
Score = 176 bits (445), Expect = 7e-43 Identities = 81/132 (61%), Positives = 97/132 (73%) Frame = +1
Query: 10 KQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGPC 189 ++L+ QS LW +KDELKK+V T ELR MLE NGQ+TSG E L +RCADGMLFGALG C Sbjct: 237 EKLKEQSDTLWKLKDELKKHVSTAELRNMLEANGQDTSGPERHLLDRCADGMLFGALGTC 296
Query: 190 PTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQKA 369 P C+ + HGGQY C G +SEWSKCTY+T P R + KWKIP++ DN YL KWFKSQKA Sbjct: 297 PVCSSFLYYHGGQYHCSGYVSEWSKCTYSTTEPVRSKKKWKIPDEMDNGYLTKWFKSQKA 356
Query: 370 KKEKRLFSTKLP 405 KK +R+ P Sbjct: 357 KKPERVLPPMSP 368
>tr|A3BIX4|A3BIX4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022996 PE=4 SV=1 Length = 944
Score = 176 bits (445), Expect = 7e-43 Identities = 81/132 (61%), Positives = 97/132 (73%) Frame = +1
Query: 10 KQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGPC 189 ++L+ QS LW +KDELKK+V T ELR MLE NGQ+TSG E L +RCADGMLFGALG C Sbjct: 213 EKLKEQSDTLWKLKDELKKHVSTAELRNMLEANGQDTSGPERHLLDRCADGMLFGALGTC 272
Query: 190 PTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQKA 369 P C+ + HGGQY C G +SEWSKCTY+T P R + KWKIP++ DN YL KWFKSQKA Sbjct: 273 PVCSSFLYYHGGQYHCSGYVSEWSKCTYSTTEPVRSKKKWKIPDEMDNGYLTKWFKSQKA 332
Query: 370 KKEKRLFSTKLP 405 KK +R+ P Sbjct: 333 KKPERVLPPMSP 344
>tr|A9SSX0|A9SSX0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188096 PE=4 SV=1 Length = 989
Score = 163 bits (412), Expect = 4e-39 Identities = 74/127 (58%), Positives = 92/127 (72%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 + +LE QSK+LW IKD+L+++V ELR ML N Q+T+GSEYD+RERCADGM+FG L Sbjct: 247 ESKLEKQSKSLWEIKDKLREHVSIVELREMLAANNQDTTGSEYDVRERCADGMMFGVLAK 306
Query: 187 CPTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQK 366 CP C G +E GG YRCRG LS WSKCT+TT +PER KW+I E DN YL W+K+Q Sbjct: 307 CPLCEGYMEYQGGSYRCRGYLSAWSKCTFTTLTPERTTAKWEIGEACDNDYLLGWYKTQS 366
Query: 367 AKKEKRL 387 K +RL Sbjct: 367 KMKGERL 373
>tr|B8A188|B8A188_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 446
Score = 161 bits (408), Expect = 1e-38 Identities = 74/131 (56%), Positives = 91/131 (69%) Frame = +1
Query: 13 QLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGPCP 192 +L+ QS LW +KD LK +V ELR MLE NGQ+TSG E L +RCADGMLFGALGPCP Sbjct: 241 KLKEQSDTLWKLKDGLKTHVSAAELRDMLEANGQDTSGPERHLLDRCADGMLFGALGPCP 300
Query: 193 TCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPEDSDNSYLKKWFKSQKAK 372 C + + GQY+C GN+SEWSKCTY+ P R++ KW+IP + N YL KWFKSQK K Sbjct: 301 VCANGMYYYNGQYQCSGNVSEWSKCTYSATEPVRVKKKWQIPHGTKNDYLMKWFKSQKVK 360
Query: 373 KEKRLFSTKLP 405 K +R+ P Sbjct: 361 KPERVLPPMSP 371
>tr|A7RNW1|A7RNW1_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g88355 PE=4 SV=1 Length = 968
Score = 110 bits (276), Expect = 3e-23 Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 3/131 (2%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 ++QL+ QS+A+W I+DELK N +ELR MLE+N G E + +RC+DGMLFG L P Sbjct: 185 EQQLKEQSEAIWKIRDELKTNCSLSELREMLEDNEINPQGGETSVFDRCSDGMLFGRLLP 244
Query: 187 CPTCNGPIEIHGGQ-YRCRGNLSEWSKCTYTTRSPERLQGKWKIPED--SDNSYLKKWFK 357 C C+G + ++ Y C GN+S W+KC +TT+ P+R KW I ++ N +LK + Sbjct: 245 CHECHGGMLVYRSDGYHCTGNVSGWTKCAFTTQDPKRT--KWVISKELKKTNDFLKTF-- 300
Query: 358 SQKAKKEKRLF 390 K K+ KRLF Sbjct: 301 --KCKEMKRLF 309
>tr|B6PZ38|B6PZ38_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_112691 PE=4 SV=1 Length = 795
Score = 104 bits (259), Expect = 2e-21 Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 +K+L+ QSK +W I+DEL K+++ ++L+ +L N Q+ E L +R +DGM FGAL Sbjct: 121 EKKLKEQSKLVWKIRDELCKSMENSDLKELLLANDQDIPSGESALLDRLSDGMAFGALQR 180
Query: 187 CPTC-NGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPED--SDNSYLKKWFK 357 CP C G + Y C GNL+EW+KC YTTR P+R KW IP D + +LKK+ Sbjct: 181 CPECKQGQLFYRSDGYHCSGNLTEWTKCIYTTREPKR--KKWIIPADLKEEVPFLKKF-- 236
Query: 358 SQKAKKEKRLFS 393 K+K R+FS Sbjct: 237 --KSKVAARVFS 246
>tr|B6N2Q1|B6N2Q1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_125672 PE=4 SV=1 Length = 1000
Score = 104 bits (259), Expect = 2e-21 Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 +K+L+ QSK +W I+DEL K+++ ++L+ +L N Q+ E L +R +DGM FGAL Sbjct: 225 EKKLKEQSKLVWKIRDELCKSMENSDLKELLLANDQDIPSGESALLDRLSDGMAFGALQR 284
Query: 187 CPTC-NGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPED--SDNSYLKKWFK 357 CP C G + Y C GNL+EW+KC YTTR P+R KW IP D + +LKK+ Sbjct: 285 CPECKQGQLFYRSDGYHCSGNLTEWTKCIYTTREPKR--KKWIIPADLKEEVPFLKKF-- 340
Query: 358 SQKAKKEKRLFS 393 K+K R+FS Sbjct: 341 --KSKVAARVFS 350
>tr|Q921K2|Q921K2_MOUSE Poly (ADP-ribose) polymerase family, member 1 OS=Mus musculus GN=Parp1 PE=2 SV=1 Length = 1014
Score = 100 bits (249), Expect = 4e-20 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 1/129 (0%) Frame = +1
Query: 7 DKQLETQSKALWSIKDELKKNVDTNELRMMLEENGQETSGSEYDLRERCADGMLFGALGP 186 +K L+ Q++ +W+IKDELKK TN+L+ +L N Q+ E + +R ADGM FGAL P Sbjct: 236 EKALKAQNELIWNIKDELKKACSTNDLKELLIFNQQQVPSGESAILDRVADGMAFGALLP 295
Query: 187 CPTCNGPIEIHGGQYRCRGNLSEWSKCTYTTRSPERLQGKWKIPED-SDNSYLKKWFKSQ 363 C C+G + Y C G+++ W+KC T++P R + W P++ + SYLKK Sbjct: 296 CKECSGQLVFKSDAYYCTGDVTAWTKCMVKTQNPSRKE--WVTPKEFREISYLKK----L 349
Query: 364 KAKKEKRLF 390 K KK+ R+F Sbjct: 350 KVKKQDRIF 358
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