BP918534
Clone id YMU001_000114_F07
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTAGATAGAATTGAGAATTCACACTTCCATAATCCTTTGTTCTGTACTTGCGTTAATGGA
TGCAACTGTGCATTTGCTTCCACCAACTCACACTACCACTAATTCCCAATGACCAGTGAT
CTATTTGGCTTATGCATCTGTATTCATATTAGTACACATAACAGCTAACAGAAGTGTCCA
GGATTGAAGTTGTTCAAAGAACGTTCAAAGAACGAAGTCAGCAAGATTCCCTTTCATGCC
AAGACATGGCATTGTAGCATTTGGAGTACTCAAAACACCATGCATTTCAAGCTTGTAAAC
CAGATCCATCTTCGAAAGCTTGGCTGACGGCTATGTGGGTGTACTGCTGAGCTAATGTGA
ACCCTCCATGTGAATGATTAAAGTCCTCAACCACATGTATCACGCGGAATTTCTCTCATG
TAAATGGGTAAAAGTTCACAAACAATAAGGATCCTAACAACACATAGAATATG
■■Homology search results ■■ -
sp_hit_id P41951
Definition sp|P41951|PQN25_CAEEL Prion-like-(Q/N-rich) domain-bearing protein 25 OS=Caenorhabditis elegans
Align length 50
Score (bit) 30.4
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918534|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F07.
(473 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P41951|PQN25_CAEEL Prion-like-(Q/N-rich) domain-bearing prote... 30 4.2

>sp|P41951|PQN25_CAEEL Prion-like-(Q/N-rich) domain-bearing protein
25 OS=Caenorhabditis elegans GN=pqn-25 PE=2 SV=3
Length = 672

Score = 30.4 bits (67), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1

Query: 16 NSHFHNPLFCTCVNGCNCAFASTNSHYH*FPMTSDLFGLCICIHISTHNS 165
NS+F+ PL CT + C+C +S +S + IC + ST+N+
Sbjct: 60 NSNFNQPLTCTPQDACSCYSSSGSSRFG-----------TICQYASTYNN 98


tr_hit_id Q2QQC9
Definition tr|Q2QQC9|Q2QQC9_ORYSJ Os12g0498700 protein OS=Oryza sativa subsp. japonica
Align length 18
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918534|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F07.
(473 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2QQC9|Q2QQC9_ORYSJ Os12g0498700 protein OS=Oryza sativa subs... 35 1.9
tr|A3CHK4|A3CHK4_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9
tr|Q2MGS0|Q2MGS0_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2
tr|A7P036|A7P036_VITVI Chromosome chr6 scaffold_3, whole genome ... 34 3.2
tr|Q6NKT6|Q6NKT6_ARATH At1g11880 OS=Arabidopsis thaliana GN=At1g... 33 7.1
tr|O65394|O65394_ARATH F12F1.28 protein OS=Arabidopsis thaliana ... 33 7.1
tr|B6MAN8|B6MAN8_BRAFL Putative uncharacterized protein OS=Branc... 30 8.6

>tr|Q2QQC9|Q2QQC9_ORYSJ Os12g0498700 protein OS=Oryza sativa subsp.
japonica GN=Os12g0498700 PE=2 SV=1
Length = 486

Score = 35.0 bits (79), Expect = 1.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2

Query: 472 IFYVLLGSLLFVNFYPFT 419
I Y+LLGSLLF NFYPFT
Sbjct: 469 IAYILLGSLLFSNFYPFT 486


>tr|A3CHK4|A3CHK4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_034776 PE=4 SV=1
Length = 485

Score = 35.0 bits (79), Expect = 1.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2

Query: 472 IFYVLLGSLLFVNFYPFT 419
I Y+LLGSLLF NFYPFT
Sbjct: 468 IAYILLGSLLFSNFYPFT 485


>tr|Q2MGS0|Q2MGS0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula GN=MtrDRAFT_AC147481g6v2 PE=4 SV=1
Length = 486

Score = 34.3 bits (77), Expect = 3.2
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2

Query: 466 YVLLGSLLFVNFYPFT 419
Y+LLGSLLF NFYPFT
Sbjct: 471 YILLGSLLFSNFYPFT 486


>tr|A7P036|A7P036_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024752001
PE=4 SV=1
Length = 497

Score = 34.3 bits (77), Expect = 3.2
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2

Query: 466 YVLLGSLLFVNFYPFT 419
Y+LLGSLLF NFYPFT
Sbjct: 482 YILLGSLLFSNFYPFT 497


>tr|Q6NKT6|Q6NKT6_ARATH At1g11880 OS=Arabidopsis thaliana
GN=At1g11880 PE=2 SV=1
Length = 489

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2

Query: 466 YVLLGSLLFVNFYPFT 419
Y+LLG+LLF NFYPFT
Sbjct: 474 YILLGTLLFSNFYPFT 489


>tr|O65394|O65394_ARATH F12F1.28 protein OS=Arabidopsis thaliana
GN=F12F1.28 PE=4 SV=1
Length = 492

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2

Query: 466 YVLLGSLLFVNFYPFT 419
Y+LLG+LLF NFYPFT
Sbjct: 477 YILLGTLLFSNFYPFT 492


>tr|B6MAN8|B6MAN8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_80159 PE=4 SV=1
Length = 1306

Score = 30.4 bits (67), Expect(2) = 8.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1

Query: 130 LCICIHISTHNS*QKCPGLKLFKERSK---NEVSKI 228
LC+C+H Q CPGLKL+++ +K N VS +
Sbjct: 772 LCVCLH-------QLCPGLKLWRDSAKLCQNNVSMV 800



Score = 21.2 bits (43), Expect(2) = 8.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3

Query: 63 QLCICFHQL 89
+LC+C HQL
Sbjct: 771 RLCVCLHQL 779