BP918535
Clone id YMU001_000114_F09
Library
Length 382
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACACACACCCAAAAACCCACACACATCCATTACTCCTAACCACCTCAGGATCGTTAGGA
GTAATTCCTAGCTCCTAACCACCTCCTTGTCATCATGCAATTTCCACTCTGAGCCACTCT
TAAGGAAATTCTCCTAACCATCCATACCAAGATACTAAGCTCTATCCCACACAAGCCATG
TACATTTACCTAGATTTTAACTTCTCTTGCGATGCTCACCTATTCCAAAGTTGTGAAGAG
CACCCCATTCATAACCAATCTTCAACACAATCTGCCCCTTAGCTCCTCACTATAGCATGA
ATATCACGTGCCTTTCTTGCTCTCGTGCACAAACTTTGACCATTGTATAAGCCCTCAAGT
GATTACCCCTCTCTCAATGCTG
■■Homology search results ■■ -
sp_hit_id Q9FY50
Definition sp|Q9FY50|RK10_ARATH 50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana
Align length 25
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918535|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F09.
(382 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FY50|RK10_ARATH 50S ribosomal protein L10, chloroplastic OS... 30 2.8
sp|Q9CLN7|PLSB_PASMU Glycerol-3-phosphate acyltransferase OS=Pas... 29 8.2

>sp|Q9FY50|RK10_ARATH 50S ribosomal protein L10, chloroplastic
OS=Arabidopsis thaliana GN=RPL10 PE=2 SV=1
Length = 220

Score = 30.4 bits (67), Expect = 2.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1

Query: 70 SS*PPPCHHAISTLSHS*GNSPNHP 144
SS P CH ISTL+ NSPN+P
Sbjct: 10 SSLSPLCHQRISTLTPKTSNSPNYP 34


>sp|Q9CLN7|PLSB_PASMU Glycerol-3-phosphate acyltransferase
OS=Pasteurella multocida GN=plsB PE=3 SV=1
Length = 809

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1

Query: 133 PNHPYQDTKLYPTQAMYIYLDFNFSCDAHLFQ 228
P+HP ++ KL PTQ M L + D +F+
Sbjct: 26 PHHPIEELKLDPTQPMVYVLPYTSQTDLVIFR 57


tr_hit_id Q833V3
Definition tr|Q833V3|Q833V3_ENTFA N-acetylmuramoyl-L-alanine amidase, family 4 OS=Enterococcus faecalis
Align length 41
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP918535|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F09.
(382 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q833V3|Q833V3_ENTFA N-acetylmuramoyl-L-alanine amidase, famil... 33 9.4

>tr|Q833V3|Q833V3_ENTFA N-acetylmuramoyl-L-alanine amidase, family 4
OS=Enterococcus faecalis GN=EF_1823 PE=4 SV=1
Length = 652

Score = 32.7 bits (73), Expect = 9.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1

Query: 226 GIGEHRKRS*NLGKCTWLVWDRA*YLGMDG*ENFLKSGSEW 104
GI +R S +G+CTW V++R LG + F+ +GS+W
Sbjct: 532 GINYNRSGSYPVGQCTWYVYNRFKQLGTSV-DEFMGNGSDW 571