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NBDC - LSDB Archive
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BP918536
Clone id YMU001_000114_F10
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000114_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGCAAGGGCAGACATGGTTTGCTCTAGCTACCTTTTCAAAAGGTTCAAACATACGCCTC
ATGCCATCTGCCATATCATGCTGACTTTTACGAATCTCTTTTTTCTCTATGGCTTCCTGA
AGATTTGATGAAAACGCTTCAATATCGACCTGTACCTCTCGCATGGCACTCAGTCTACTC
AAAATAACCTTTCTCTTTGCATCTCTATCTCGTTGCAGCAGATGAAAGCTCAGCTCGAGC
ATCCTGTAACTTTAGTGACACCAGATCGACCTCTTGCTTGGCTACCAAGGATTTATCATT
CATGCATTTGAACTCCTCAGAAGTAGACCGAAGCACATCACCAATTTCTTTCTTCAAGCT
CTCTGCCCCTGGAAAGCGTCCCTTGAGAGCCTTTCTAACACTTTCCTTGTTATCATCCAT
TATTCTCTTTAGCTTTCTTTCTTTATCGGCAAGATCGTCTCTTTTCAGATCAAGTTGCAC
ATTCGCGGCCGCGAATTCTTCCAGTT
■■Homology search results ■■ -
sp_hit_id Q9SL02
Definition sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis thaliana
Align length 70
Score (bit) 72.8
E-value 4.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918536|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F10.
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis th...    73   4e-25
sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acantha...    37   0.061
sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1...    33   0.52 
sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1...    33   0.52 
sp|Q9N2B6|5HT1E_PANTR 5-hydroxytryptamine receptor 1E (Fragment)...    32   1.1  
sp|P28566|5HT1E_HUMAN 5-hydroxytryptamine receptor 1E OS=Homo sa...    32   1.1  
sp|Q69ZB0|LRCC1_MOUSE Leucine-rich repeat and coiled-coil domain...    32   2.0  
sp|Q5ZIB2|FBF1_CHICK Fas-binding factor 1 homolog OS=Gallus gall...    31   2.5  
sp|Q642G2|SOSD1_RAT Sclerostin domain-containing protein 1 OS=Ra...    31   2.6  
sp|Q9CQN4|SOSD1_MOUSE Sclerostin domain-containing protein 1 OS=...    31   2.6  
sp|Q8RGH4|HTPG_FUSNN Chaperone protein htpG OS=Fusobacterium nuc...    31   2.6  
sp|Q6VB83|5HT1E_CAVPO 5-hydroxytryptamine receptor 1E OS=Cavia p...    31   3.3  
sp|P77658|YNAA_ECOLI Putative uncharacterized protein ynaA OS=Es...    31   3.4  
sp|P50532|SMC4_XENLA Structural maintenance of chromosomes prote...    31   3.4  
sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogast...    30   4.4  
sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=1     25   5.5  
sp|O96133|YB145_PLAF7 Uncharacterized protein PFB0145c OS=Plasmo...    30   5.7  
sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptid...    30   5.7  
sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=...    30   5.7  
sp|Q0A8I0|RECR_ALHEH Recombination protein recR OS=Alkalilimnico...    30   7.4  
sp|Q12717|LAC5_TRAVE Laccase-5 OS=Trametes versicolor GN=LCC5 PE...    30   7.4  
sp|P53804|TTC3_HUMAN Tetratricopeptide repeat protein 3 OS=Homo ...    30   7.5  
sp|Q827T0|SYH_STRAW Histidyl-tRNA synthetase OS=Streptomyces ave...    30   7.5  
sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair ra...    30   7.5  
sp|P24520|PNUC_SALTY Nicotinamide riboside transporter pnuC OS=S...    30   7.5  
sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding prote...    30   7.5  
sp|P08964|MYO1_YEAST Myosin-1 OS=Saccharomyces cerevisiae GN=MYO...    30   7.5  
sp|Q07457|BRE1_YEAST E3 ubiquitin-protein ligase BRE1 OS=Sacchar...    30   7.5  
sp|P56093|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida a...    29   9.6  
sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes prote...    29   9.8  

>sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis
           thaliana GN=RAD50 PE=1 SV=2
          Length = 1316

 Score = 72.8 bits (177), Expect(2) = 4e-25
 Identities = 31/70 (44%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 RDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPFEK 33
           +D +++++ I S+L A+++  V I+A+   L+ A +K++ RK +++MA+GMR+MFEPFEK
Sbjct: 628 KDTESRKRYIESKLQALKQESVTIDAYPKLLESAKDKRDDRKREYNMANGMRQMFEPFEK 687

Query: 32  VARANHVCPC 3
            AR  H CPC
Sbjct: 688 RARQEHSCPC 697



 Score = 61.6 bits (148), Expect(2) = 4e-25
 Identities = 30/85 (35%), Positives = 55/85 (64%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L LK+ +  + ++K K+I+D+ K+ +R  LKGR P  + +K+EI   LRS   E+  +
Sbjct: 539 VKLSLKKTEQENLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKREIVQALRSIEREYDDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAEL 226
           + KS  A++EV+++ +K+Q+    L
Sbjct: 599 SLKSREAEKEVNMLQMKIQEVNNSL 623


>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba
            castellanii PE=3 SV=1
          Length = 1509

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -1

Query: 474  LDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCMND 295
            LD +RD  A + RKL   + + +  +  A K     +E +K+  G+ L    EE     +
Sbjct: 1215 LDAERDSGAQQRRKLNTRISELQSELENAPKTGGASSEEVKRLEGE-LERLEEELLTAQE 1273

Query: 294  KSLVAKQEVDLVSLKLQDARAELSSAA 214
                A++ +D  +L+L++ R E   AA
Sbjct: 1274 ARAAAEKNLDKANLELEELRQEADDAA 1300


>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1
            OS=Mus musculus GN=Clip1 PE=1 SV=1
          Length = 1391

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -1

Query: 477  QLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRST---SEEFK 307
            +L+  R++L D E K K   DD ++ + KA        E L+ +I ++++ +   S +  
Sbjct: 847  ELEKLRENLTDMEAKFKE-KDDREDQLVKA-------KEKLENDIAEIMKMSGDNSSQLT 898

Query: 306  CMNDKSLVAKQEVDLVSLKLQDARAELS 223
             MND+  + ++ V+ + LKL  A    S
Sbjct: 899  KMNDELRLKERSVEELQLKLTKANENAS 926


>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1
            OS=Homo sapiens GN=CLIP1 PE=1 SV=1
          Length = 1427

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = -1

Query: 474  LDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRST---SEEFKC 304
            L+  R++LAD E K +   D+ +E + KA        E L+ +I ++++ +   S +   
Sbjct: 884  LEKLRENLADMEAKFRE-KDEREEQLIKA-------KEKLENDIAEIMKMSGDNSSQLTK 935

Query: 303  MNDKSLVAKQEVDLVSLKLQDARAELS 223
            MND+  + +++V+ + LKL  A    S
Sbjct: 936  MNDELRLKERDVEELQLKLTKANENAS 962


>sp|Q9N2B6|5HT1E_PANTR 5-hydroxytryptamine receptor 1E (Fragment)
           OS=Pan troglodytes GN=HTR1E PE=3 SV=1
          Length = 363

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 89  YESLFSLWLPEDLMKTLQYRPVPLAWHSVYSK*PFSLHLYLVAADESSARASCNFSDTRS 268
           Y +L + ++P  L+  L YR +  A  S+Y K   S HL   + D  ++ ASC  + T  
Sbjct: 185 YSTLGAFYIPLTLILILYYR-IYHAAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFC 243

Query: 269 TSCLATKD 292
            S  +T D
Sbjct: 244 VSDFSTSD 251


>sp|P28566|5HT1E_HUMAN 5-hydroxytryptamine receptor 1E OS=Homo
           sapiens GN=HTR1E PE=1 SV=1
          Length = 365

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 89  YESLFSLWLPEDLMKTLQYRPVPLAWHSVYSK*PFSLHLYLVAADESSARASCNFSDTRS 268
           Y +L + ++P  L+  L YR +  A  S+Y K   S HL   + D  ++ ASC  + T  
Sbjct: 185 YSTLGAFYIPLTLILILYYR-IYHAAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFC 243

Query: 269 TSCLATKD 292
            S  +T D
Sbjct: 244 VSDFSTSD 251


>sp|Q69ZB0|LRCC1_MOUSE Leucine-rich repeat and coiled-coil
            domain-containing protein 1 OS=Mus musculus GN=Lrrcc1
            PE=2 SV=2
          Length = 1026

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = -1

Query: 480  VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRS-TSEEFKC 304
            +Q+   ++   DKERKLK   D + E  + A++      ++ ++++ +++ +  +E  + 
Sbjct: 913  MQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKLQNMDDAFRRQVDEIVEAHQAEIMQL 972

Query: 303  MNDKSLVAKQEVDLVSLKLQDARAELSSAATR*RCKEKGYFE 178
             N+K    ++ +D  +LK+Q    E+        CK K   E
Sbjct: 973  ANEK----QKYIDCANLKVQQVEDEMRGLLDE-TCKNKKMME 1009


>sp|Q5ZIB2|FBF1_CHICK Fas-binding factor 1 homolog OS=Gallus gallus
           GN=FBF1 PE=2 SV=1
          Length = 1132

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 212 RDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQ 81
           R RD + KV+  RLS   + Q D+E   S LQE I K E R S+
Sbjct: 770 RQRDEQLKVLQDRLS---QQQRDMEEERSRLQEVIAKMEARLSE 810


>sp|Q642G2|SOSD1_RAT Sclerostin domain-containing protein 1
           OS=Rattus norvegicus GN=Sostdc1 PE=2 SV=1
          Length = 206

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -1

Query: 330 RSTSEEFKCMNDKSLVAKQEVDLVSLKLQDARAELSSAATR*RCKEKGYFE*TECHARGT 151
           R +S+E++C+NDK+   +     + L+ QD             CK K Y   T  H   +
Sbjct: 125 RRSSQEWRCVNDKTRTQR-----IQLQCQDGSTRTYKITVVTACKCKRY---TRQHNESS 176

Query: 150 GRY*SVF-IKSSGSHREKRDS*KSA 79
             + SV   K +  HRE++ + KS+
Sbjct: 177 HNFESVSPAKPAQHHRERKRASKSS 201


>sp|Q9CQN4|SOSD1_MOUSE Sclerostin domain-containing protein 1 OS=Mus
           musculus GN=Sostdc1 PE=1 SV=1
          Length = 206

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -1

Query: 330 RSTSEEFKCMNDKSLVAKQEVDLVSLKLQDARAELSSAATR*RCKEKGYFE*TECHARGT 151
           R +S+E++C+NDK+   +     + L+ QD             CK K Y   T  H   +
Sbjct: 125 RRSSQEWRCVNDKTRTQR-----IQLQCQDGSTRTYKITVVTACKCKRY---TRQHNESS 176

Query: 150 GRY*SVF-IKSSGSHREKRDS*KSA 79
             + SV   K +  HRE++ + KS+
Sbjct: 177 HNFESVSPAKPAQHHRERKRASKSS 201
tr_hit_id A8IE27
Definition tr|A8IE27|A8IE27_TRITU DNA repair protein Rad50 OS=Triticum turgidum
Align length 72
Score (bit) 72.0
E-value 1.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918536|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_F10.
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8IE27|A8IE27_TRITU DNA repair protein Rad50 OS=Triticum turg...    72   1e-26
tr|A8IE16|A8IE16_TRIMO DNA repair protein Rad50 OS=Triticum mono...    72   1e-26
tr|A8IE14|A8IE14_TRITU DNA repair protein Rad50 OS=Triticum turg...    72   1e-26
tr|A8IE00|A8IE00_TRIMO DNA repair protein Rad50 OS=Triticum mono...    72   1e-26
tr|A8IE08|A8IE08_AEGTA DNA repair protein Rad50 OS=Aegilops taus...    72   3e-26
tr|A8IE20|A8IE20_AEGTA DNA repair protein Rad50 OS=Aegilops taus...    72   6e-26
tr|A8IE24|A8IE24_TRITU DNA repair protein Rad50 OS=Triticum turg...    71   2e-25
tr|A8IE11|A8IE11_TRITU DNA repair protein Rad50 OS=Triticum turg...    69   7e-25
tr|A7Q735|A7Q735_VITVI Chromosome chr5 scaffold_58, whole genome...    76   3e-24
tr|Q7Y239|Q7Y239_ORYSJ Os02g0497500 protein OS=Oryza sativa subs...    77   4e-13
tr|B8AIA2|B8AIA2_ORYSI Putative uncharacterized protein OS=Oryza...    76   7e-13
tr|A3A742|A3A742_ORYSJ Putative uncharacterized protein OS=Oryza...    60   4e-08
tr|A5AV28|A5AV28_VITVI Putative uncharacterized protein OS=Vitis...    60   4e-08
tr|B3MGY7|B3MGY7_DROAN GF13694 OS=Drosophila ananassae GN=GF1369...    39   0.13 
tr|Q7K4K7|Q7K4K7_DROME Centrosomin's beautiful sister OS=Drosoph...    38   0.22 
tr|B4QED9|B4QED9_DROSI GD10966 OS=Drosophila simulans GN=GD10966...    38   0.22 
tr|B4P4H4|B4P4H4_DROYA GE12543 OS=Drosophila yakuba GN=GE12543 P...    38   0.22 
tr|B3NRK8|B3NRK8_DROER GG20382 OS=Drosophila erecta GN=GG20382 P...    38   0.22 
tr|B4HQI9|B4HQI9_DROSE GM21469 OS=Drosophila sechellia GN=GM2146...    37   0.37 
tr|A2E8Z5|A2E8Z5_TRIVA Viral A-type inclusion protein, putative ...    37   0.37 
tr|A1WXR8|A1WXR8_HALHL MCP methyltransferase, CheR-type OS=Halor...    37   0.63 
tr|Q56VC3|Q56VC3_PIG Caspase-8 OS=Sus scrofa PE=2 SV=1                 36   0.83 
tr|Q28ZT8|Q28ZT8_DROPS GA18469 OS=Drosophila pseudoobscura pseud...    36   1.1  
tr|B4GGT1|B4GGT1_DROPE GL17075 OS=Drosophila persimilis GN=GL170...    36   1.1  
tr|A2FU34|A2FU34_TRIVA Putative uncharacterized protein OS=Trich...    36   1.1  
tr|B0JZG9|B0JZG9_XENTR LOC100145206 protein OS=Xenopus tropicali...    35   1.4  
tr|Q3KJI0|Q3KJI0_PSEPF Peptidase M23B OS=Pseudomonas fluorescens...    35   1.4  
tr|A2ESN0|A2ESN0_TRIVA Viral A-type inclusion protein, putative ...    35   1.4  
tr|A9SWG7|A9SWG7_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.4  
tr|A8F5E2|A8F5E2_THELT Outer membrane protein-like protein OS=Th...    35   1.8  

>tr|A8IE27|A8IE27_TRITU DNA repair protein Rad50 OS=Triticum
           turgidum PE=4 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 1e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624


>tr|A8IE16|A8IE16_TRIMO DNA repair protein Rad50 OS=Triticum
           monococcum PE=4 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 1e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624


>tr|A8IE14|A8IE14_TRITU DNA repair protein Rad50 OS=Triticum
           turgidum PE=2 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 1e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVGSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624


>tr|A8IE00|A8IE00_TRIMO DNA repair protein Rad50 OS=Triticum
           monococcum PE=2 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 1e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624


>tr|A8IE08|A8IE08_AEGTA DNA repair protein Rad50 OS=Aegilops
           tauschii PE=2 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 3e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 69.7 bits (169), Expect(2) = 3e-26
 Identities = 33/86 (38%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ L+
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLA 624


>tr|A8IE20|A8IE20_AEGTA DNA repair protein Rad50 OS=Aegilops
           tauschii PE=4 SV=1
          Length = 1316

 Score = 72.0 bits (175), Expect(2) = 6e-26
 Identities = 33/72 (45%), Positives = 52/72 (72%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           LQ+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF
Sbjct: 626 LQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPF 685

Query: 38  EKVARANHVCPC 3
           EKVAR +H CPC
Sbjct: 686 EKVARQHHKCPC 697



 Score = 68.6 bits (166), Expect(2) = 6e-26
 Identities = 33/86 (38%), Positives = 54/86 (62%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A Q++ L  +K+  A++ L+
Sbjct: 599 NSKSQEAGQQLKLAQMKIDAAKSHLA 624


>tr|A8IE24|A8IE24_TRITU DNA repair protein Rad50 OS=Triticum
           turgidum PE=4 SV=1
          Length = 1316

 Score = 70.9 bits (172), Expect(2) = 2e-25
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624



 Score = 67.8 bits (164), Expect(2) = 2e-25
 Identities = 31/71 (43%), Positives = 50/71 (70%)
 Frame = -2

Query: 215 QRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPFE 36
           Q+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF 
Sbjct: 627 QKVLDAKRKHLNSKLQSISKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFG 686

Query: 35  KVARANHVCPC 3
           KVAR +H CPC
Sbjct: 687 KVARQHHKCPC 697


>tr|A8IE11|A8IE11_TRITU DNA repair protein Rad50 OS=Triticum
           turgidum PE=2 SV=1
          Length = 1316

 Score = 69.3 bits (168), Expect(2) = 7e-25
 Identities = 34/86 (39%), Positives = 55/86 (63%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V+L+LK+D+L   ++KLK+I D++K+  R  LKGR P  + +KKEI     S   E+  +
Sbjct: 539 VKLELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRPPHEKDVKKEITQAFGSVDSEYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A+Q++ L  +K+  A++ LS
Sbjct: 599 NSKSQEAEQQLKLAQMKIDAAKSHLS 624



 Score = 67.8 bits (164), Expect(2) = 7e-25
 Identities = 31/71 (43%), Positives = 50/71 (70%)
 Frame = -2

Query: 215 QRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPFE 36
           Q+  DAKRK + S+L ++ +V VDI A+   L++A+++++ + +    A GMR+M+EPF 
Sbjct: 627 QKVLDAKRKHLNSKLQSISKVSVDINAYPKILKDAMDERDKQTNNFSYAKGMRQMYEPFG 686

Query: 35  KVARANHVCPC 3
           KVAR +H CPC
Sbjct: 687 KVARQHHKCPC 697


>tr|A7Q735|A7Q735_VITVI Chromosome chr5 scaffold_58, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031663001
           PE=4 SV=1
          Length = 1093

 Score = 76.3 bits (186), Expect(2) = 3e-24
 Identities = 31/72 (43%), Positives = 55/72 (76%)
 Frame = -2

Query: 218 LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDMADGMRRMFEPF 39
           L +D D++++ I S+L ++ +    IE++      A EK++++KS++++ADGM++MF+PF
Sbjct: 415 LNKDMDSRKRFIESKLQSLDQQSFSIESYMKAFDLAKEKRDVQKSKYNIADGMKQMFDPF 474

Query: 38  EKVARANHVCPC 3
           E+VARA+HVCPC
Sbjct: 475 ERVARAHHVCPC 486



 Score = 58.5 bits (140), Expect(2) = 3e-24
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -1

Query: 441 ERKLKRI-MDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCMNDKSLVAKQEVD 265
           +R +KR  MD+ K+ +R  LKGR P  + LKKEI   LR+   EF  MN KS  A++EV+
Sbjct: 340 KRNIKRCKMDEYKDRIRGVLKGRLPPDKDLKKEITQALRALGIEFDDMNSKSREAEKEVN 399

Query: 264 LVSLKLQDARAELS 223
           ++ +K+++    LS
Sbjct: 400 MLQMKIEEVNNNLS 413


>tr|Q7Y239|Q7Y239_ORYSJ Os02g0497500 protein OS=Oryza sativa subsp.
           japonica GN=rad50 PE=2 SV=2
          Length = 1316

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 36/86 (41%), Positives = 56/86 (65%)
 Frame = -1

Query: 480 VQLDLKRDDLADKERKLKRIMDDNKESVRKALKGRFPGAESLKKEIGDVLRSTSEEFKCM 301
           V LD+K+D+L + ++KLK+I D++K+ +R   KGR P  + +KKE+     S   E+  +
Sbjct: 539 VLLDVKKDELEESKKKLKKIFDEHKDKIRIVFKGRTPSEKEVKKELSQAFGSVDREYNDL 598

Query: 300 NDKSLVAKQEVDLVSLKLQDARAELS 223
           N KS  A QE+ LV +K+ DAR+ LS
Sbjct: 599 NSKSQEAAQELKLVQMKILDARSHLS 624



 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = -2

Query: 245 RMLELSFHL--LQRDRDAKRKVILSRLSAMREVQVDIEAFSSNLQEAIEKKEIRKSQHDM 72
           ++L+   HL  LQ++ DAKR  + S+L ++ ++  DI  F  +L++A++++E +K+    
Sbjct: 615 KILDARSHLSKLQKELDAKRSYVESKLQSITKMSADINMFPKHLKDAMDEREKQKNNLSY 674

Query: 71  ADGMRRMFEPFEKVARANHVCPC 3
           A GMR+M+EPFE +AR  H+CPC
Sbjct: 675 AKGMRQMYEPFENLARELHMCPC 697