BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918539|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_G01.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q17335|ADHX_CAEEL Alcohol dehydrogenase class-3 OS=Caenorhabd...    33   1.3  
sp|Q9C284|SEC23_NEUCR Protein transport protein sec-23 OS=Neuros...    32   2.8  
sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1    31   3.7  
sp|P39141|NUPC_BACSU Pyrimidine nucleoside transport protein OS=...    31   4.8  
sp|O74685|FADH_PICPA S-(hydroxymethyl)glutathione dehydrogenase ...    30   8.2  

>sp|Q17335|ADHX_CAEEL Alcohol dehydrogenase class-3
           OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1
          Length = 384

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -1

Query: 341 CQTAKN*TTFFCASLSS*KGSNSLPTSMRELNASISQCFHVYGCSKLQP---VADVAVAK 171
           C+  KN  T  C  +   +G+  +P        +  Q FH  GCS       VAD+++ K
Sbjct: 103 CEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCK 162

Query: 170 L 168
           +
Sbjct: 163 V 163


>sp|Q9C284|SEC23_NEUCR Protein transport protein sec-23
           OS=Neurospora crassa GN=sec-23 PE=3 SV=1
          Length = 775

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +1

Query: 175 ATATSATGWSLEHP*TWKHCEIDAFSS---RIEVGSEFEPFYELKEAQKKVVQFLAV*QQ 345
           +T+   T   + +  TWK C ID  SS     E+ ++  P   ++  QK ++QFL   Q 
Sbjct: 434 STSVGETECGIGNTCTWKMCGIDPSSSYGIYFEIANQGGPSQNMQSPQKGMMQFLTYYQH 493

Query: 346 ST 351
           S+
Sbjct: 494 SS 495


>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
          Length = 1131

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 24  GKIEREIDEVCGQPYRGLQESSQELPSAHRSEFLYR 131
           G++ REI + C +PY GL   + ++P A  S FL+R
Sbjct: 249 GEVIREITKPCLEPYLGLHYPATDIPQA--SRFLFR 282


>sp|P39141|NUPC_BACSU Pyrimidine nucleoside transport protein
           OS=Bacillus subtilis GN=nupC PE=3 SV=3
          Length = 393

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 391 NFLV---QNGAGFELYDFVEGIVF*FGVQVGLKLKTQRLFFMTVLGSVVFFTA 540
           NFLV     G G+ L    EGI F FG   GL    Q  FFM VL  +VF +A
Sbjct: 53  NFLVGGFAKGFGYLLEYAAEGINFVFG---GLVNADQTTFFMNVLLPIVFISA 102


>sp|O74685|FADH_PICPA S-(hydroxymethyl)glutathione dehydrogenase
           OS=Pichia pastoris GN=FLD1 PE=3 SV=1
          Length = 379

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
 Frame = -1

Query: 365 VMSKTVDC--CQTAKN*TTFFCASLSS*KGSNSLPTSMRELNASISQCFHVYGCSKLQP- 195
           V+  T +C  C+   +  T  C  + + +G   LP             FH  GCS     
Sbjct: 92  VLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQY 151

Query: 194 --VADVAVAKL 168
             VAD++V K+
Sbjct: 152 TVVADISVVKV 162

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918539|Adiantum capillus-veneris mRNA, clone:
YMU001_000114_G01.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1BQX9|A1BQX9_SCHMD Alcohol dehydrogenase class 3 OS=Schmidte...    34   6.3  
tr|B2S154|B2S154_BORHD RNA polymerase sigma factor RpoD OS=Borre...    33   8.2  
tr|Q8IC29|Q8IC29_PLAF7 Putative uncharacterized protein MAL7P1.1...    33   8.2  
tr|Q23AX2|Q23AX2_TETTH Putative uncharacterized protein OS=Tetra...    33   8.2  

>tr|A1BQX9|A1BQX9_SCHMD Alcohol dehydrogenase class 3 OS=Schmidtea
           mediterranea GN=Adh3 PE=2 SV=1
          Length = 379

 Score = 33.9 bits (76), Expect = 6.3
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 341 CQTAKN*TTFFCASLSS*KGSNSLPTSMRELNASISQCFHVYGCSKLQP---VADVAVAK 171
           C+  KN  T  C+ + S +G+  +P             FH  GCS       VA++++AK
Sbjct: 104 CKFCKNSKTNLCSLIRSTQGAGLMPDGTTRFTCKGKNLFHYMGCSTFSEYTVVAEISLAK 163

Query: 170 LARRGKM 150
           +++   +
Sbjct: 164 VSKEAPL 170


>tr|B2S154|B2S154_BORHD RNA polymerase sigma factor RpoD OS=Borrelia
           hermsii (strain DAH) GN=BH0712 PE=4 SV=1
          Length = 630

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -3

Query: 459 ESEN-DSFYKVVELKASSVLNQKVLESKLCS-SSYEQNSRLLSNCQKLNDFLLCFFELIE 286
           E EN D  Y V+E +  S++N+K +ES +CS   +++ S+L S C  L+D +    EL +
Sbjct: 48  EPENIDYMYGVLENEGISLINEK-MESAICSIDEFDEASKLDSQCMILDDSVQSDDELDD 106

Query: 285 RL 280
           +L
Sbjct: 107 KL 108


>tr|Q8IC29|Q8IC29_PLAF7 Putative uncharacterized protein MAL7P1.17
            OS=Plasmodium falciparum (isolate 3D7) GN=MAL7P1.17 PE=4
            SV=1
          Length = 3535

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -3

Query: 537  SKENNRAQNCHEKQSLCF*FQTHLHSESENDSFYKVVELKASSVLNQKVLESKLCS-SSY 361
            +  NN   N H   S      ++ HS ++ D   K +EL  SS++N+      + S  SY
Sbjct: 2420 NNNNNNNNNSHNNNSHSH--NSNSHSNNQGDIHIKKIEL--SSIINKNKENYSMESLKSY 2475

Query: 360  EQNSRLLSNCQKLNDFLLCFFELI 289
            E N++L S  +K    L+C   L+
Sbjct: 2476 ENNNKLDSEKKKKKKELICPINLL 2499


>tr|Q23AX2|Q23AX2_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_00654050 PE=4
            SV=1
          Length = 3627

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = -3

Query: 531  ENNRAQNCHEKQSLCF*FQTHLHSESEN---DSFYKVVELKASSVLNQKVLESKLCSSSY 361
            +N   +   E Q+  F +Q +LH+ S+N   D F K  +   ++ ++Q     K   +SY
Sbjct: 3449 DNQIRKEFQESQTNIFQYQKNLHNVSQNQKEDKFRKQYQESLATTISQNQSNKKEIETSY 3508

Query: 360  EQNSRLLSNCQKLN 319
            EQ + L  +   +N
Sbjct: 3509 EQQANLPESQNMMN 3522