BP918548 |
Clone id |
YMU001_000114_G10 |
Library |
YMU01 |
Length |
429 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_G10. |
Accession |
BP918548 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL632Contig1 |
Sequence |
CATCCCAGCCTGTCAGTGAGGCAGGAAGCAGCAAATCATTAGAAGTACCTCTAAAACCTT ACTTTTTTGTGCCTCCTCCTTTACCTTCATCTCAAACTACCTTTCTCCATCCTCCCCCTC CATTGCAGCCGTCAGTTGGTGCTCCTCTTCTGCAGCCATTCCCTCCACCTGTGCCATCAC CATCTCTGACACCAAATTCCGTGTTGCCAAGTAAGCCAGTTATTAGTAGGGAAGGAGTCC GTGATGCTCTCTTCCGACTTGTGCAGAATGATACATTTATCGACATGGTCTTTGAGGAGA TGTCGAAGGCACAAAGGCGACCAGCCTAGTTTAAGGTGTCACTCGTACGTTTGGTGCAGG CTTCGCTCAGTTTTGACGCTTTCATGTATATTTGTACCTTGCTAAGCTGTATACTTCTAT GCGAGAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0GNC1 |
Definition |
sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus |
Align length |
41 |
Score (bit) |
34.3 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQS3 |
Definition |
tr|B8LQS3|B8LQS3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
105 |
Score (bit) |
62.4 |
E-value |
1.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918548|Adiantum capillus-veneris mRNA, clone: YMU001_000114_G10. (429 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQS3|B8LQS3_PICSI Putative uncharacterized protein OS=Picea... 62 1e-08 tr|A9S7I6|A9S7I6_PHYPA Predicted protein OS=Physcomitrella paten... 53 7e-06 tr|Q7XHS7|Q7XHS7_ORYSJ Os07g0249600 protein OS=Oryza sativa subs... 48 3e-04 tr|A2YJX0|A2YJX0_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|Q53QH1|Q53QH1_ORYSJ mRNA decapping enzyme, putative, expresse... 47 4e-04 tr|B8BJ62|B8BJ62_ORYSI Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|B6TBF0|B6TBF0_MAIZE Dcp1-like decapping family protein OS=Zea... 47 4e-04 tr|B4FW43|B4FW43_MAIZE Putative uncharacterized protein OS=Zea m... 47 4e-04 tr|A3C8R8|A3C8R8_ORYSJ Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|B6UBI1|B6UBI1_MAIZE Dcp1-like decapping family protein OS=Zea... 46 0.001 tr|B4FIG5|B4FIG5_MAIZE Putative uncharacterized protein OS=Zea m... 46 0.001 tr|A7PP94|A7PP94_VITVI Chromosome chr8 scaffold_23, whole genome... 45 0.002 tr|Q2QXH6|Q2QXH6_ORYSJ Os12g0156400 protein OS=Oryza sativa subs... 45 0.002 tr|B8BN98|B8BN98_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|B6T785|B6T785_MAIZE Dcp1-like decapping family protein OS=Zea... 43 0.007 tr|B4FJC9|B4FJC9_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.007 tr|A9PE94|A9PE94_POPTR Putative uncharacterized protein OS=Popul... 41 0.026 tr|Q10AY3|Q10AY3_ORYSJ cDNA clone:J013148J04, full insert sequen... 41 0.034 tr|Q0DLZ5|Q0DLZ5_ORYSJ Os03g0837000 protein (Fragment) OS=Oryza ... 41 0.034 tr|B8AN96|B8AN96_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.034 tr|A9PI85|A9PI85_POPTR Putative uncharacterized protein OS=Popul... 41 0.034 tr|Q38JI6|Q38JI6_SOLTU Putative uncharacterized protein OS=Solan... 39 0.10 tr|B4FT08|B4FT08_MAIZE Dcp1-like decapping family protein OS=Zea... 38 0.29 tr|A9TRE6|A9TRE6_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.1 tr|A7QF74|A7QF74_VITVI Chromosome undetermined scaffold_87, whol... 35 1.4 tr|B0FDM0|B0FDM0_9ABAC Putative uncharacterized protein OS=Orgyi... 35 1.9 tr|B5DE93|B5DE93_XENTR Crkrs protein OS=Xenopus tropicalis GN=cr... 34 3.2 tr|B1SWV6|B1SWV6_9BURK Putative uncharacterized protein OS=Burkh... 34 3.2 tr|B8P301|B8P301_9APHY Predicted protein OS=Postia placenta Mad-... 34 3.2 tr|B6HJX9|B6HJX9_PENCH Pc21g19810 protein OS=Penicillium chrysog... 34 3.2
>tr|B8LQS3|B8LQS3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 368
Score = 62.4 bits (150), Expect = 1e-08 Identities = 41/105 (39%), Positives = 49/105 (46%), Gaps = 10/105 (9%) Frame = +3
Query: 27 SSKSLEVPLKPYFFVPPPLPSSQTTF----------LHPPPPLQPSVGAXXXXXXXXXXX 176 SS S +KP FFVP P S+ L+P PPLQPS GA Sbjct: 261 SSSSHATLVKPSFFVPQPSLSTSMPLSLSNAPMAPPLNPLPPLQPSYGAPLLQPFPPPAP 320
Query: 177 XXXXXXXXXXXXKPVISREGVRDALFRLVQNDTFIDMVFEEMSKA 311 P+I+R+ VRD L RLVQN+ FIDMV+ EM A Sbjct: 321 SQSLAPASTVSQGPIITRDKVRDTLARLVQNEHFIDMVYREMLNA 365
>tr|A9S7I6|A9S7I6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_182007 PE=4 SV=1 Length = 356
Score = 53.1 bits (126), Expect = 7e-06 Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 4/91 (4%) Frame = +3
Query: 51 LKPYFFVPPPLPSSQTTFLHPPPP----LQPSVGAXXXXXXXXXXXXXXXXXXXXXXXKP 218 +KP FFVPPPL S + P P LQPS GA Sbjct: 265 IKPSFFVPPPLSSGHSAPSAPLVPSTTSLQPSHGAPLLQPFPPPNPPLSLAPTMQHSVS- 323
Query: 219 VISREGVRDALFRLVQNDTFIDMVFEEMSKA 311 I+++GVR+AL RLV+N+ FIDMV+ EM A Sbjct: 324 -ITKDGVREALNRLVKNEHFIDMVYREMMNA 353
>tr|Q7XHS7|Q7XHS7_ORYSJ Os07g0249600 protein OS=Oryza sativa subsp. japonica GN=P0021G06.113 PE=2 SV=1 Length = 382
Score = 47.8 bits (112), Expect = 3e-04 Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Frame = +3
Query: 48 PLKPYFFVPP--PLPSSQTTFLHPPPPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXXKPV 221 PL F +P P P T L P PP PS PV Sbjct: 310 PLLQPFPLPTASPSPPYGTPLLQPFPPPNPSPSLASAPVY-----------------SPV 352
Query: 222 ISREGVRDALFRLVQNDTFIDMVFEEMSK 308 +SRE VRDAL RLV+ND FID+V+ E+ K Sbjct: 353 LSREKVRDALLRLVENDDFIDLVYREIVK 381
>tr|A2YJX0|A2YJX0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25526 PE=4 SV=1 Length = 382
Score = 47.8 bits (112), Expect = 3e-04 Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Frame = +3
Query: 48 PLKPYFFVPP--PLPSSQTTFLHPPPPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXXKPV 221 PL F +P P P T L P PP PS PV Sbjct: 310 PLLQPFPLPTASPSPPYGTPLLQPFPPPNPSPSLASAPVY-----------------SPV 352
Query: 222 ISREGVRDALFRLVQNDTFIDMVFEEMSK 308 +SRE VRDAL RLV+ND FID+V+ E+ K Sbjct: 353 LSREKVRDALLRLVENDDFIDLVYREIVK 381
>tr|Q53QH1|Q53QH1_ORYSJ mRNA decapping enzyme, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g05650 PE=4 SV=1 Length = 380
Score = 47.4 bits (111), Expect = 4e-04 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Frame = +3
Query: 57 PYFFVPPPLPSSQTTFLHPP--------PPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXX 212 P FF PP SS +T + PP PPL P+ + Sbjct: 283 PAFFTPP---SSSSTSMVPPASSMMPTAPPLHPTSASAQRATYGTPLLQPFPPPTPPPSL 339
Query: 213 KP------VISREGVRDALFRLVQNDTFIDMVFEEMSKA 311 P +ISR+ V++AL RLVQND FID+V+ E+ A Sbjct: 340 TPSYNEGPIISRDKVKEALLRLVQNDQFIDLVYRELQNA 378
>tr|B8BJ62|B8BJ62_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35166 PE=4 SV=1 Length = 332
Score = 47.4 bits (111), Expect = 4e-04 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Frame = +3
Query: 57 PYFFVPPPLPSSQTTFLHPP--------PPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXX 212 P FF PP SS +T + PP PPL P+ + Sbjct: 235 PAFFTPP---SSSSTSMVPPASSMMPTAPPLHPTSASAQRATYGTPLLQPFPPPTPPPSL 291
Query: 213 KP------VISREGVRDALFRLVQNDTFIDMVFEEMSKA 311 P +ISR+ V++AL RLVQND FID+V+ E+ A Sbjct: 292 TPSYNEGPIISRDKVKEALLRLVQNDQFIDLVYRELQNA 330
>tr|B6TBF0|B6TBF0_MAIZE Dcp1-like decapping family protein OS=Zea mays PE=2 SV=1 Length = 368
Score = 47.4 bits (111), Expect = 4e-04 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 11/95 (11%) Frame = +3
Query: 51 LKPYFFVPPPLPSSQTT-----FLHPPPPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXXK 215 L P FF PPP S+ T + PPL P+ A Sbjct: 269 LTPAFFAPPPPSSTSVTPPASSMMPTAPPLHPTSTAAQHPSYGTPLLQPFPAPSPPPSLT 328
Query: 216 P------VISREGVRDALFRLVQNDTFIDMVFEEM 302 P VISR+ V+D L RLVQND FID+++ E+ Sbjct: 329 PAHNDGLVISRDKVKDTLQRLVQNDEFIDLIYREL 363
>tr|B4FW43|B4FW43_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 368
Score = 47.4 bits (111), Expect = 4e-04 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 11/95 (11%) Frame = +3
Query: 51 LKPYFFVPPPLPSSQTT-----FLHPPPPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXXK 215 L P FF PPP S+ T + PPL P+ A Sbjct: 269 LTPAFFAPPPPSSTSVTPPASSMMPTAPPLHPTSTAAQHPSYGTPLLQPFPAPSPPPSLT 328
Query: 216 P------VISREGVRDALFRLVQNDTFIDMVFEEM 302 P VISR+ V+D L RLVQND FID+++ E+ Sbjct: 329 PAHNDGLVISRDKVKDTLQRLVQNDEFIDLIYREL 363
>tr|A3C8R8|A3C8R8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031690 PE=4 SV=1 Length = 334
Score = 47.4 bits (111), Expect = 4e-04 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 14/99 (14%) Frame = +3
Query: 57 PYFFVPPPLPSSQTTFLHPP--------PPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXX 212 P FF PP SS +T + PP PPL P+ + Sbjct: 237 PAFFTPP---SSSSTSMVPPASSMMPTAPPLHPTSASAQRATYGTPLLQPFPPPTPPPSL 293
Query: 213 KP------VISREGVRDALFRLVQNDTFIDMVFEEMSKA 311 P +ISR+ V++AL RLVQND FID+V+ E+ A Sbjct: 294 TPSYNEGPIISRDKVKEALLRLVQNDQFIDLVYRELQNA 332
>tr|B6UBI1|B6UBI1_MAIZE Dcp1-like decapping family protein OS=Zea mays PE=2 SV=1 Length = 382
Score = 45.8 bits (107), Expect = 0.001 Identities = 32/91 (35%), Positives = 39/91 (42%), Gaps = 2/91 (2%) Frame = +3
Query: 48 PLKPYFFVPP--PLPSSQTTFLHPPPPLQPSVGAXXXXXXXXXXXXXXXXXXXXXXXKPV 221 PL F +P P P T L P PP PS P Sbjct: 309 PLLQPFLLPTASPSPPYGTPLLQPFPPPNPSPSLASAPVL-----------------SPA 351
Query: 222 ISREGVRDALFRLVQNDTFIDMVFEEMSKAQ 314 +SR+ VRDAL RLV+ND FID+V+ E+ Q Sbjct: 352 LSRDKVRDALLRLVENDEFIDLVYGEIMNRQ 382
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