BP918551 |
Clone id |
YMU001_000114_H01 |
Library |
YMU01 |
Length |
281 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000114_H01. |
Accession |
BP918551 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL64Contig1 |
Sequence |
AGTGATTGTCGCTATTGAAAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGG TCAGAGGGCAGTATTAAAATTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCA CACTCCAGGAACGTTTACCAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGAT ATTGACAGACCCACGTACTGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCC TATTATTGCATTTTGTGACACAGATTCCCCCATGCGCCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22518 |
Definition |
sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max |
Align length |
93 |
Score (bit) |
178.0 |
E-value |
6.0e-45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TDH1 |
Definition |
tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
93 |
Score (bit) |
179.0 |
E-value |
6.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP918551|Adiantum capillus-veneris mRNA, clone: YMU001_000114_H01. (281 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten... 179 6e-44 tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit... 179 6e-44 tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 179 6e-44 tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten... 179 6e-44 tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s... 177 2e-43 tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs... 177 2e-43 tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar... 177 2e-43 tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque... 177 2e-43 tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre... 177 2e-43 tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 177 2e-43 tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 177 2e-43 tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 177 2e-43 tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 177 2e-43 tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m... 177 2e-43 tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m... 177 2e-43 tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m... 177 2e-43 tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza... 177 2e-43 tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza... 177 2e-43 tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza... 177 2e-43 tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea... 177 3e-43 tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea... 177 3e-43 tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ... 177 3e-43 tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis... 177 3e-43 tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic... 176 4e-43 tr|Q38M60|Q38M60_SOLTU Ribosome-associated protein p40-like OS=S... 176 5e-43 tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=... 176 5e-43 tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul... 176 7e-43 tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 174 2e-42 tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul... 174 2e-42 tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul... 174 3e-42
>tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193949 PE=3 SV=1 Length = 292
Score = 179 bits (454), Expect = 6e-44 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VI AIENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLI Sbjct: 55 VIAAIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLI 114
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPI EAALGNIP+IAFCDTDSPM++ Sbjct: 115 LTDPRTDHQPIMEAALGNIPVIAFCDTDSPMKY 147
>tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46426 PE=3 SV=1 Length = 278
Score = 179 bits (454), Expect = 6e-44 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VI AIENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLI Sbjct: 53 VIAAIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLI 112
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPI EAALGNIP+IAFCDTDSPM++ Sbjct: 113 LTDPRTDHQPIMEAALGNIPVIAFCDTDSPMKY 145
>tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126323 PE=3 SV=1 Length = 305
Score = 179 bits (454), Expect = 6e-44 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VI AIENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLI Sbjct: 56 VIAAIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLI 115
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPI EAALGNIP+IAFCDTDSPM++ Sbjct: 116 LTDPRTDHQPIMEAALGNIPVIAFCDTDSPMKY 148
>tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105781 PE=3 SV=1 Length = 292
Score = 179 bits (454), Expect = 6e-44 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VI AIENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLI Sbjct: 55 VIAAIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLI 114
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPI EAALGNIP+IAFCDTDSPM++ Sbjct: 115 LTDPRTDHQPIMEAALGNIPVIAFCDTDSPMKY 147
>tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza sativa GN=OSJNBa0032G08.18 PE=3 SV=1 Length = 305
Score = 177 bits (449), Expect = 2e-43 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+ Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRY 160
>tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subsp. japonica GN=B1056G08.113 PE=2 SV=2 Length = 305
Score = 177 bits (449), Expect = 2e-43 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+ Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRY 160
>tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Arabidopsis thaliana GN=At1g72370 PE=3 SV=1 Length = 294
Score = 177 bits (449), Expect = 2e-43 Identities = 86/92 (93%), Positives = 88/92 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLI 127
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMR 277 LTDPRTDHQPIKE ALGNIPIIAFCDTDSPMR Sbjct: 128 LTDPRTDHQPIKEGALGNIPIIAFCDTDSPMR 159
>tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g08440 PE=2 SV=1 Length = 305
Score = 177 bits (449), Expect = 2e-43 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+ Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRY 160
>tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g08440 PE=3 SV=1 Length = 269
Score = 177 bits (449), Expect = 2e-43 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+ Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRY 160
>tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 177 bits (449), Expect = 2e-43 Identities = 86/93 (92%), Positives = 89/93 (95%) Frame = +2
Query: 2 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 181 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 128
Query: 182 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRH 280 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+ Sbjct: 129 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRY 161
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