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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP918567
Clone id YMU001_000115_A07
Library
Length 458
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000115_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCAAAAAATAAGACCAAGCTATGCTGCTCTATATGGCCAGATCATCTAGAGATAATTTA
AAAGCATCACTCATCTATGACGCATGCTCAAGATCACATCAGCAGACCCGTTTTTTTGTA
ATGACAATACTCGACACTGCAGATACATATTTTATGATTCCGCAGCATGTTGAAGAGCAC
TTGGCAAGTACCATGTCGAGTCAAGTTGCAACGTCATGCATTTTTGAGCCTACTTCCCAA
GACAGCTGAAAGCTGCTACCCCATCCCAGGGCCTCTATCTTGTGTTAAAGCATGAAACCA
TGAAACTAAAGCAACGATGATGTCTGGTTTCCACGGTGACAATCACAGCTGCAAACATTT
CGTGATCCTTCAACTACTCGCTGTGCGCGACGAATGTGTAGCTTGATAAGGGGTAACTTC
CCCGCAATCATCCTCCAAGTCAGGTCCTCAGGTCCCAA
■■Homology search results ■■ -
sp_hit_id Q9XBQ3
Definition sp|Q9XBQ3|ABFA_BACST Alpha-N-arabinofuranosidase OS=Bacillus stearothermophilus
Align length 77
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918567|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_A07.
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XBQ3|ABFA_BACST Alpha-N-arabinofuranosidase OS=Bacillus ste...    31   2.6  
sp|Q4JTI5|METX_CORJK Homoserine O-acetyltransferase OS=Corynebac...    30   5.9  
sp|A4SL68|LPXK_AERS4 Tetraacyldisaccharide 4'-kinase OS=Aeromona...    29   7.7  
sp|Q9KBR4|ABFA_BACHD Alpha-N-arabinofuranosidase OS=Bacillus hal...    29   10.0 

>sp|Q9XBQ3|ABFA_BACST Alpha-N-arabinofuranosidase OS=Bacillus
           stearothermophilus GN=abfA PE=1 SV=4
          Length = 502

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -1

Query: 434 EDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCS-CDCHRGNQTSSLL*FHGFML*HKIE 258
           E + W  + G    + + +    R ++ +RN+   C+   G+  S L   HG+   HKI+
Sbjct: 111 EFMDWAKMVGAE--VNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIK 168

Query: 257 ALGWGSSFQLSWEVGSK 207
               G+     W++G K
Sbjct: 169 TWCLGNEMDGPWQIGHK 185


>sp|Q4JTI5|METX_CORJK Homoserine O-acetyltransferase
           OS=Corynebacterium jeikeium (strain K411) GN=metX PE=3
           SV=1
          Length = 395

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 103 VMTILDTADTYFMIPQHVEEHLASTMSSQVATSCIFEPTSQD 228
           V T++   DT  + P H +EHL+  +   +  S I  PT  D
Sbjct: 318 VPTMVVGVDTDILYPLHQQEHLSRNLGDFIGMSKITSPTGHD 359


>sp|A4SL68|LPXK_AERS4 Tetraacyldisaccharide 4'-kinase OS=Aeromonas
           salmonicida (strain A449) GN=lpxK PE=3 SV=1
          Length = 331

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 220 K*AQKCMTLQLDSTWYLPSALQHAAES*NMYLQ-CRVLSLQKNGS 89
           K A KC T  LDS WYLP + +  A   +  LQ    L++ ++GS
Sbjct: 285 KDAVKCRTFALDSWWYLPVSAELPASLLDTLLQKLPSLTVPRSGS 329


>sp|Q9KBR4|ABFA_BACHD Alpha-N-arabinofuranosidase OS=Bacillus
           halodurans GN=abfA PE=3 SV=1
          Length = 500

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 392 IKLHIRRAQRVVEGSRNVCS-CDCHRGNQTSSLL*FHGFML*HKIEALGWGSSFQLSWEV 216
           + + +    R V+ +RN+   C+   G+  S L   HG+   H I+    G+     W++
Sbjct: 122 VNMAVNLGSRGVDAARNLVEYCNHPSGSYWSDLRISHGYKDPHNIKTWCLGNEMDGPWQI 181

Query: 215 GSK 207
           G K
Sbjct: 182 GQK 184
tr_hit_id Q9LFL2
Definition tr|Q9LFL2|Q9LFL2_ARATH Putative uncharacterized protein F2K13_40 (Putative uncharacterized protein At5g16890) OS=Arabidopsis thaliana
Align length 48
Score (bit) 80.1
E-value 5.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP918567|Adiantum capillus-veneris mRNA, clone:
YMU001_000115_A07.
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LFL2|Q9LFL2_ARATH Putative uncharacterized protein F2K13_40...    80   5e-14
tr|A9RXE0|A9RXE0_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|B4G102|B4G102_MAIZE Putative uncharacterized protein OS=Zea m...    72   1e-11
tr|B4FXG3|B4FXG3_MAIZE Putative uncharacterized protein OS=Zea m...    72   1e-11
tr|A7P259|A7P259_VITVI Chromosome chr19 scaffold_4, whole genome...    70   7e-11
tr|Q5VQN0|Q5VQN0_ORYSJ Exostosin family protein-like (Os01g08114...    64   4e-09
tr|A2ZYV7|A2ZYV7_ORYSJ Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|A2WW84|A2WW84_ORYSI Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|Q84SM6|Q84SM6_ORYSJ Exostosin family protein-like protein OS=...    39   0.13 
tr|Q0D5E0|Q0D5E0_ORYSJ Os07g0567000 protein OS=Oryza sativa subs...    39   0.13 
tr|B8B7H4|B8B7H4_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.13 
tr|A3BL94|A3BL94_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.13 
tr|Q9FLA5|Q9FLA5_ARATH Gb|AAC61825.1 (At5g44930/K21C13_11) OS=Ar...    38   0.22 
tr|A7P2R0|A7P2R0_VITVI Chromosome chr1 scaffold_5, whole genome ...    37   0.63 
tr|A5BLW9|A5BLW9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.63 
tr|A2Q146|A2Q146_MEDTR Exostosin-like OS=Medicago truncatula GN=...    35   2.4  
tr|Q6DBG8|Q6DBG8_ARATH At2g35100 (Putative uncharacterized prote...    34   3.1  
tr|B6SRZ8|B6SRZ8_MAIZE Exostosin-like OS=Zea mays PE=2 SV=1            34   3.1  

>tr|Q9LFL2|Q9LFL2_ARATH Putative uncharacterized protein F2K13_40
           (Putative uncharacterized protein At5g16890)
           OS=Arabidopsis thaliana GN=F2K13_40 PE=2 SV=1
          Length = 511

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDCHRGNQTSS 300
           LGPEDLTWRMIAGKL  IKLH RR+QRVV+GSR++C CDC R N T+S
Sbjct: 456 LGPEDLTWRMIAGKLVNIKLHTRRSQRVVKGSRSICRCDCWRSNSTAS 503


>tr|A9RXE0|A9RXE0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_120864 PE=4 SV=1
          Length = 426

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDCHRGNQTSSLL 294
           LGPEDLTWRM+AGKL  ++LHIRR+QR+VEG+   C+C C R N T++ L
Sbjct: 377 LGPEDLTWRMVAGKLQSVRLHIRRSQRLVEGALGTCNCQCTRANSTATRL 426


>tr|B4G102|B4G102_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 240

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDCHRGNQTSSL 297
           LGPEDLTWRMIAGKL  IKL IRR+QR+V+ SR++C+C+C  GN T  L
Sbjct: 192 LGPEDLTWRMIAGKLVNIKLQIRRSQRLVKESRSICTCECRVGNTTRML 240


>tr|B4FXG3|B4FXG3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 497

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDCHRGNQTSSL 297
           LGPEDLTWRMIAGKL  IKL IRR+QR+V+ SR++C+C+C  GN T  L
Sbjct: 449 LGPEDLTWRMIAGKLVNIKLQIRRSQRLVKESRSICTCECRVGNTTRML 497


>tr|A7P259|A7P259_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027890001
           PE=4 SV=1
          Length = 453

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 32/46 (69%), Positives = 35/46 (76%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDCHRGNQT 306
           LGPEDL WRM+AGKL  IKLH RR QRVV  SR +C+CDC R N T
Sbjct: 406 LGPEDLVWRMMAGKLMNIKLHTRRLQRVVRESRRLCTCDCKRANFT 451


>tr|Q5VQN0|Q5VQN0_ORYSJ Exostosin family protein-like (Os01g0811400
           protein) OS=Oryza sativa subsp. japonica GN=P0468B07.49
           PE=4 SV=1
          Length = 512

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCS 333
           LGPEDLTWRMIAGKL  IKLHIRR+QRVV  SR++CS
Sbjct: 451 LGPEDLTWRMIAGKLVNIKLHIRRSQRVVRESRSICS 487


>tr|A2ZYV7|A2ZYV7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003729 PE=4 SV=1
          Length = 504

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCS 333
           LGPEDLTWRMIAGKL  IKLHIRR+QRVV  SR++CS
Sbjct: 443 LGPEDLTWRMIAGKLVNIKLHIRRSQRVVRESRSICS 479


>tr|A2WW84|A2WW84_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04166 PE=4 SV=1
          Length = 513

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 443 LGPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCS 333
           LGPEDLTWRMIAGKL  IKLHIRR+QRVV  SR++CS
Sbjct: 452 LGPEDLTWRMIAGKLVNIKLHIRRSQRVVRESRSICS 488


>tr|Q84SM6|Q84SM6_ORYSJ Exostosin family protein-like protein
           OS=Oryza sativa subsp. japonica GN=OJ1092_A07.111 PE=4
           SV=1
          Length = 453

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -1

Query: 440 GPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDC 324
           GP +  W  ++ K PLIKL I R +R+VE   N   C C
Sbjct: 404 GPVNQIWHQVSSKAPLIKLLINRDKRLVERGTNGTDCSC 442


>tr|Q0D5E0|Q0D5E0_ORYSJ Os07g0567000 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0567000 PE=4 SV=1
          Length = 500

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -1

Query: 440 GPEDLTWRMIAGKLPLIKLHIRRAQRVVEGSRNVCSCDC 324
           GP +  W  ++ K PLIKL I R +R+VE   N   C C
Sbjct: 451 GPVNQIWHQVSSKAPLIKLLINRDKRLVERGTNGTDCSC 489